FFCP PHASE1:Mm9::chr13:36826319..36826361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68404 | |EntrezGene=68404 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2837 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFV4 | |UniProt=Q8CFV4 | ||
|association_with_transcript=0bp_to_ENSMUST00000037623,NM_153529,uc007qcm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000037623,NM_153529,uc007qcm.1_5end | ||
|cluster_id=chr13:36826319..36826361,- | |||
|description=CAGE_peak_1_at_Nrn1_5end | |description=CAGE_peak_1_at_Nrn1_5end | ||
|id=chr13:36826319..36826361,- | |id=chr13:36826319..36826361,- | ||
|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.31e-07,23;CL:0000337,1.31e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.23e-11!34;UBERON:0001017!1.79e-11!73;UBERON:0005743!1.79e-11!73;UBERON:0000073!3.35e-11!75;UBERON:0001016!3.35e-11!75;UBERON:0001049!4.55e-11!52;UBERON:0005068!4.55e-11!52;UBERON:0006241!4.55e-11!52;UBERON:0007135!4.55e-11!52;UBERON:0002107!1.21e-10!22;UBERON:0007499!1.21e-10!22;UBERON:0006925!1.21e-10!22;UBERON:0009497!1.21e-10!22;UBERON:0000015!1.21e-10!22;UBERON:0002423!1.21e-10!22;UBERON:0006235!1.21e-10!22;UBERON:0008835!1.21e-10!22;UBERON:0003894!1.21e-10!22;UBERON:0004161!1.21e-10!22;UBERON:0008836!1.21e-10!22;UBERON:0009854!1.96e-10!23;UBERON:0009856!1.96e-10!23;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!4.91e-10!49;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000025!1.28e-09!114;UBERON:0004121!1.39e-09!102;UBERON:0000924!1.39e-09!102;UBERON:0006601!1.39e-09!102;UBERON:0000468!2.23e-09!333;UBERON:0004111!3.12e-09!122;UBERON:0002346!5.46e-09!71;UBERON:0003075!5.46e-09!71;UBERON:0007284!5.46e-09!71;UBERON:0000033!1.36e-08!63;UBERON:0002365!3.46e-08!25;UBERON:0002330!3.46e-08!25;UBERON:0000956!6.42e-08!21;UBERON:0001869!6.42e-08!21;UBERON:0000203!6.42e-08!21;UBERON:0003080!7.68e-08!40;UBERON:0002780!2.02e-07!39;UBERON:0001890!2.02e-07!39;UBERON:0006240!2.02e-07!39;UBERON:0003056!3.61e-07!49;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10;UBERON:0002619!5.21e-07!17;UBERON:0000922!7.94e-07!328 | |ontology_enrichment_uberon=UBERON:0002020!1.23e-11!34;UBERON:0001017!1.79e-11!73;UBERON:0005743!1.79e-11!73;UBERON:0000073!3.35e-11!75;UBERON:0001016!3.35e-11!75;UBERON:0001049!4.55e-11!52;UBERON:0005068!4.55e-11!52;UBERON:0006241!4.55e-11!52;UBERON:0007135!4.55e-11!52;UBERON:0002107!1.21e-10!22;UBERON:0007499!1.21e-10!22;UBERON:0006925!1.21e-10!22;UBERON:0009497!1.21e-10!22;UBERON:0000015!1.21e-10!22;UBERON:0002423!1.21e-10!22;UBERON:0006235!1.21e-10!22;UBERON:0008835!1.21e-10!22;UBERON:0003894!1.21e-10!22;UBERON:0004161!1.21e-10!22;UBERON:0008836!1.21e-10!22;UBERON:0009854!1.96e-10!23;UBERON:0009856!1.96e-10!23;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!4.91e-10!49;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000025!1.28e-09!114;UBERON:0004121!1.39e-09!102;UBERON:0000924!1.39e-09!102;UBERON:0006601!1.39e-09!102;UBERON:0000468!2.23e-09!333;UBERON:0004111!3.12e-09!122;UBERON:0002346!5.46e-09!71;UBERON:0003075!5.46e-09!71;UBERON:0007284!5.46e-09!71;UBERON:0000033!1.36e-08!63;UBERON:0002365!3.46e-08!25;UBERON:0002330!3.46e-08!25;UBERON:0000956!6.42e-08!21;UBERON:0001869!6.42e-08!21;UBERON:0000203!6.42e-08!21;UBERON:0003080!7.68e-08!40;UBERON:0002780!2.02e-07!39;UBERON:0001890!2.02e-07!39;UBERON:0006240!2.02e-07!39;UBERON:0003056!3.61e-07!49;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10;UBERON:0002619!5.21e-07!17;UBERON:0000922!7.94e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.66e-12,34;UBERON:0000073,8.96e-12,54;UBERON:0001017,2.68e-11,73;UBERON:0001016,4.98e-11,75;UBERON:0002107,6.95e-11,22;UBERON:0007499,6.95e-11,22;UBERON:0006925,6.95e-11,22;UBERON:0009497,6.95e-11,22;UBERON:0000015,6.95e-11,22;UBERON:0002423,6.95e-11,22;UBERON:0006235,6.95e-11,22;UBERON:0008835,6.95e-11,22;UBERON:0003894,6.95e-11,22;UBERON:0004161,6.95e-11,22;UBERON:0008836,6.95e-11,22;UBERON:0001049,7.27e-11,52;UBERON:0005068,7.27e-11,52;UBERON:0006241,7.27e-11,52;UBERON:0007135,7.27e-11,52;UBERON:0009854,1.14e-10,23;UBERON:0009856,1.14e-10,23;UBERON:0003528,7.44e-10,29;UBERON:0002791,7.44e-10,29;UBERON:0001893,7.44e-10,29;UBERON:0004121,2.21e-09,95;UBERON:0000924,2.21e-09,95;UBERON:0006601,2.21e-09,95;UBERON:0002346,7.21e-09,64;UBERON:0003075,7.21e-09,64;UBERON:0007284,7.21e-09,64;UBERON:0000955,7.23e-09,47;UBERON:0006238,7.23e-09,47;UBERON:0000025,1.05e-08,114;UBERON:0002616,1.54e-08,46;UBERON:0002365,2.70e-08,25;UBERON:0002330,2.70e-08,25;UBERON:0004111,3.05e-08,122;UBERON:0010371,3.15e-08,73;UBERON:0000956,4.35e-08,21;UBERON:0001869,4.35e-08,21;UBERON:0000203,4.35e-08,21;UBERON:0003080,1.75e-07,40;UBERON:0002021,2.97e-07,10;UBERON:0000411,2.97e-07,10;UBERON:0001950,2.97e-07,10;UBERON:0002619,3.73e-07,17;UBERON:0002780,4.61e-07,39;UBERON:0001890,4.61e-07,39;UBERON:0006240,4.61e-07,39 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.671517087647559,0.467225281191051,4.00282302668886,5.91312633037,1.87251621057595,8.90333434772626,1.91453181588807,1.19840510951844,0.174840804837995,0,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,16.4133549991565,0,0,0,0,0,0.430761996159075,0.215471232685889,0.380046838912748,1.00812051903972,0,0,0,0,5.77703239502549,14.7948834369058,11.0251452381679,0,0,0,0,0,0,1.51076181570693,1.31790010585369,1.28482726513177,0,8.50298109883741,25.9229695626677,7.38833616482277,1.53985063787899,0,0,2.17608642603403,0.336093799142464,0.514518872071894,0.286533439938757,1.03134418455488,37.6308617198852,39.6743234454025,22.8179305262225,1.0165335962074,0,7.19919773825119,1.97773272513395,5.6838409195688,4.49400165777607,5.76327457982332,20.9453016863125,19.1708432431001,18.5085965989216,66.84233035049,63.3892712531131,7.34944795289724,8.33855597858656,8.27296907949019,36.3382407297983,125.77202801391,103.377196881452,28.4874381497219,36.0461315793494,30.7338888628488,59.4659787872941,41.6444331423443,37.4355707053185,72.4786320265222,73.7485306539353,27.2143190904939,1.74170244666323,7.3304413303582,4.34796733052517,79.1589966822876,276.068361485347,279.026550076751,224.172864019446,169.80219020989,43.5377702408431,0,0,0,2.39433813620357,0,0,0,0,0,0,74.219521817389,4.14300613835475,4.60170631100957,3.12273588179045,9.43842982767638,8.99400439298628,8.74191315205211,4.8211369925639,3.14166478324189,3.95511948374998,5.20557684911682,0.884610551949874,3.07357014900077,1.10420759230197,0.969750506270444,7.45567044872489,59.1417209963325,67.0229461803056,1.53274233125155,0,0,0,93.3195683492045,22.4175295381127,2.01046963380583,155.572766572087,187.183714765802,86.0242504476579,80.7961490077433,2.85150218780886,2.11491850037158,0.505445516867349,3.99839526184301,0.650602214813519,5.9774547152703,10.9837899181263,12.2070902446929,4.01415344992834,3.71529788826064,4.49768277886698,23.0245999957724,0.431135985865684,0.945530400839096,3.51902248327898,9.42541649438572,11.3999372182495,11.1440693287093,18.5203922767149,6.56813080501028,0,0,0.284163499395593,3.52113813310353,1.64168241986767,1.08037236876609,0.710234206755631,1.18058539048442,2.31400669331067,1.39520366850245,3.21928081679543,0.934122738937356,1.31647879930784,1.64167464079095,4.53985333456792,2.63159977365598,9.22110484222413,3.75777972529041,176.643556793867,18.4199256158919,0,2.11560453330835,3.19932375802851,3.94802342162745,18.9435168143477,61.5134750101195,103.405790387865,94.3519105518293,10.9141684155238,116.112763080428,43.2296559136464,57.2994639478514,33.9237511587269,7.19055526923377,4.10662294761919,7.36822711041159,0.569003702859245,1.71372768914593,0,0.610953983535943,0.581857461502877,0.210407459670956,0.0632365371242573,0.295220295959204,0.156998727841375,0,385.091962586206,1.83529616287703,4.91397487783007,18.2138311031732,38.9491433065926,75.0060966830016,121.201905447956,178.371605219503,55.2881123302871,159.520181062275,263.095817945059,191.652588049279,251.502364530336,392.760155207759,323.453536580008,368.104406800249,14.5955020231618,1.13694847062291,0.488894929326078,0.339490171550376,0,0.335012514883631,1.6663054862021,0,0.788175720530955,0.8858587585951,0.159454768657487,4.58817281204066,3.7990696010497,9.25753974921674,0,0,1.47529281905711,0,101.307422282297,104.904459500022,84.4264968689878,1.76729649043061,0.315508219416257,0.390438744296638,7.75524231838076,14.3381278771531,24.285055474981,24.3445816478396,4.04810701674894,8.47541987942804,8.69633111482352,34.0600595407115,47.9757488003948,16.3820355373875,6.8412522928502,10.2281476242972,0,1.21390318077491,1.81394134178851,1.32023555829129,1.77181135728464,4.30409207121498,12.6629863652428,1.81766864738753,1.06949213515416,1.8962205476149,0,0,0.680879211507576,0.36012218806262,0.517434735131018,1.28602221018955,0.532020700926821,3.21063871683727,9.3792941743209,5.48036908406279,1.64270195644597,0.847328283455281,7.27743713581374,10.2229476823718,13.8859406958479,15.862299256105,11.6984897123074,7.71462228801788,16.6144076879015,78.4349027504456,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,0,0,0,16.2294005062569,0,2.64315307264903,7.02034715341708,3.55450103224597,9.82631536857799,8.4964538222437,17.4398791580459,11.5172614472973,5.4438288782553,0.621339313086926,1.12738587736838,12.5593898676942,17.7040584789094,28.7787758749191,27.7693620477122,31.5947954667755,16.7820851263428,9.89553324814021,3.35549902162275,0.483168241652012,1.44015003128933,0.632022241256357,0.202725215290164,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.721172697119813,0,0.201932899896295,0.15241361331,0.100826185136841,0.487289403698762,0.481059208201647,0,1.81384306892169,0,0.179427713218951,3.18980771091749,58.5364469917537,6.94425159169373,5.67770035228522,3.64426244434412,5.01572104035363,101.655331671072,123.367163383923,112.860416147561,128.2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|short_description=p1@Nrn1 | |short_description=p1@Nrn1 | ||
}} | }} |
Latest revision as of 13:34, 1 October 2015
Short description: | p1@Nrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2837 |
Association with transcript: | 0bp_to_ENSMUST00000037623, NM_153529, uc007qcm.1_5end |
EntrezGene: | Nrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.31e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-07 | 23 |