FFCP PHASE1:Mm9::chr3:128902824..128902831,+: Difference between revisions
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{{FFCP|EntrezGene=18741|HGNC=|MCL_coexpression_id=3391|UniProt=P97474|association_with_transcript=-4bp_to_NM_011098,uc008rhu.1,uc008rhv.1_5end|description=CAGE_peak_14_at_Pitx2_5end|id=chr3:128902824..128902831,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,7.89e-30,3;CL:0000117,2.04e-09,23;CL:0000337,2.04e-09,23;CL:0002613,1.34e-08,3;CL:0000540,8.22e-07,33;CL:0000047,8.22e-07,33;CL:0000031,8.22e-07,33;CL:0000404,8.22e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!8.43e-18!8;UBERON:0003296!8.43e-18!8;UBERON:0010133!8.43e-18!8;UBERON:0001894!6.47e-14!10;UBERON:0006222!6.47e-14!10;UBERON:0003056!1.71e-10!49;UBERON:0000970!1.88e-07!9;UBERON:0000019!1.88e-07!9;UBERON:0000047!1.88e-07!9;UBERON:0004088!1.88e-07!9;UBERON:0002104!1.88e-07!9;UBERON:0001456!1.88e-07!9;UBERON:0003072!1.88e-07!9;UBERON:0003071!1.88e-07!9;UBERON:0004128!1.88e-07!9;UBERON:0000033!3.36e-07!63;UBERON:0002346!7.65e-07!71;UBERON:0003075!7.65e-07!71;UBERON:0007284!7.65e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002038,7.89e-30,3;UBERON:0009663,7.89e-30,3;UBERON:0009661,7.89e-30,3;UBERON:0000125,7.89e-30,3;UBERON:0002308,7.89e-30,3;UBERON:0002420,2.89e-25,8;UBERON:0007245,2.89e-25,8;UBERON:0010009,2.89e-25,8;UBERON:0010011,2.89e-25,8;UBERON:0000454,2.89e-25,8;UBERON:0002950,1.08e-22,4;UBERON:0001891,1.08e-22,4;UBERON:0009616,1.08e-22,4;UBERON:0010286,1.08e-22,4;UBERON:0003528,1.22e-07,29;UBERON:0002791,1.22e-07,29;UBERON:0001893,1.22e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.263772575460388,1.55528994124096,0,0,1.68828783009504,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.905510786479282,0.643011105094777,0.354680467284547,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p14@Pitx2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18741 | |||
|HGNC= | |||
|MCL_coexpression_id=3391 | |||
|TSSclassifier=NA | |||
|UniProt=P97474 | |||
|association_with_transcript=-4bp_to_NM_011098,uc008rhu.1,uc008rhv.1_5end | |||
|cluster_id=chr3:128902824..128902831,+ | |||
|description=CAGE_peak_14_at_Pitx2_5end | |||
|id=chr3:128902824..128902831,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,7.89e-30,3;CL:0000117,2.04e-09,23;CL:0000337,2.04e-09,23;CL:0002613,1.34e-08,3;CL:0000540,8.22e-07,33;CL:0000047,8.22e-07,33;CL:0000031,8.22e-07,33;CL:0000404,8.22e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!8.43e-18!8;UBERON:0003296!8.43e-18!8;UBERON:0010133!8.43e-18!8;UBERON:0001894!6.47e-14!10;UBERON:0006222!6.47e-14!10;UBERON:0003056!1.71e-10!49;UBERON:0000970!1.88e-07!9;UBERON:0000019!1.88e-07!9;UBERON:0000047!1.88e-07!9;UBERON:0004088!1.88e-07!9;UBERON:0002104!1.88e-07!9;UBERON:0001456!1.88e-07!9;UBERON:0003072!1.88e-07!9;UBERON:0003071!1.88e-07!9;UBERON:0004128!1.88e-07!9;UBERON:0000033!3.36e-07!63;UBERON:0002346!7.65e-07!71;UBERON:0003075!7.65e-07!71;UBERON:0007284!7.65e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,7.89e-30,3;UBERON:0009663,7.89e-30,3;UBERON:0009661,7.89e-30,3;UBERON:0000125,7.89e-30,3;UBERON:0002308,7.89e-30,3;UBERON:0002420,2.89e-25,8;UBERON:0007245,2.89e-25,8;UBERON:0010009,2.89e-25,8;UBERON:0010011,2.89e-25,8;UBERON:0000454,2.89e-25,8;UBERON:0002950,1.08e-22,4;UBERON:0001891,1.08e-22,4;UBERON:0009616,1.08e-22,4;UBERON:0010286,1.08e-22,4;UBERON:0003528,1.22e-07,29;UBERON:0002791,1.22e-07,29;UBERON:0001893,1.22e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.263772575460388,1.55528994124096,0,0,1.68828783009504,1.37518422999129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.905510786479282,0.643011105094777,0.354680467284547,0.713475270408282,0.493647061806363,0.304464949114599,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p14@Pitx2 | |||
}} |
Latest revision as of 14:21, 1 October 2015
Short description: | p14@Pitx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Pitx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3391 |
Association with transcript: | -4bp_to_NM_011098, uc008rhu.1, uc008rhv.1_5end |
EntrezGene: | Pitx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 7.89e-30 | 3 |
CNS neuron (sensu Vertebrata) | 2.04e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-09 | 23 |
striatum neuron | 1.34e-08 | 3 |
neuron | 8.22e-07 | 33 |
neuronal stem cell | 8.22e-07 | 33 |
neuroblast | 8.22e-07 | 33 |
electrically signaling cell | 8.22e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 7.89e-30 | 3 |
telencephalic nucleus | 7.89e-30 | 3 |
midbrain nucleus | 7.89e-30 | 3 |
neural nucleus | 7.89e-30 | 3 |
nucleus of brain | 7.89e-30 | 3 |
basal ganglion | 2.89e-25 | 8 |
nuclear complex of neuraxis | 2.89e-25 | 8 |
aggregate regional part of brain | 2.89e-25 | 8 |
collection of basal ganglia | 2.89e-25 | 8 |
cerebral subcortex | 2.89e-25 | 8 |
regional part of midbrain | 1.08e-22 | 4 |
midbrain | 1.08e-22 | 4 |
presumptive midbrain | 1.08e-22 | 4 |
midbrain neural tube | 1.08e-22 | 4 |
brain grey matter | 1.22e-07 | 29 |
regional part of telencephalon | 1.22e-07 | 29 |
telencephalon | 1.22e-07 | 29 |