FFCP PHASE1:Mm9::chr11:49064044..49064074,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:49064044..49064074,+
|short_description=p2@Mgat1
|description=CAGE_peak_2_at_Mgat1_5end
|association_with_transcript=0bp_to_ENSMUST00000129541,ENSMUST0000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17308 | |EntrezGene=17308 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P27808,Q544F0 | |UniProt=P27808,Q544F0 | ||
|association_with_transcript=0bp_to_ENSMUST00000129541,ENSMUST00000149406,NM_001110150,uc007iqe.1_5end | |||
|cluster_id=chr11:49064044..49064074,+ | |||
|description=CAGE_peak_2_at_Mgat1_5end | |||
|id=chr11:49064044..49064074,+ | |||
|ontology_enrichment_celltype=CL:0000219!3.57e-10!54;CL:0000049!4.43e-07!19;CL:0000333!8.29e-07!10;CL:0000095!8.29e-07!10;CL:0000243!8.29e-07!10;CL:0000123!8.29e-07!10;CL:0000125!8.29e-07!10;CL:0000030!8.29e-07!10;CL:0000339!8.29e-07!10;CL:0002320!9.42e-07!46;CL:0000134!9.42e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.48e-10,54;CL:0000049,3.99e-07,19;CL:0000333,8.26e-07,10;CL:0000095,8.26e-07,10;CL:0000243,8.26e-07,10;CL:0000123,8.26e-07,10;CL:0000125,8.26e-07,10;CL:0000030,8.26e-07,10;CL:0000339,8.26e-07,10;CL:0002320,9.23e-07,46;CL:0000134,9.23e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.40e-13!32;UBERON:0000926!3.37e-12!193;UBERON:0004120!3.37e-12!193;UBERON:0006603!3.37e-12!193;UBERON:0003081!1.41e-09!88;UBERON:0002371!1.54e-09!16;UBERON:0001474!7.56e-09!22;UBERON:0004765!7.56e-09!22;UBERON:0001434!7.56e-09!22;UBERON:0002390!9.07e-07!45;UBERON:0003061!9.07e-07!45;UBERON:0002384!9.42e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.37e-13,32;UBERON:0000926,5.31e-11,120;UBERON:0004120,5.31e-11,120;UBERON:0006603,5.31e-11,120;UBERON:0003081,1.22e-09,87;UBERON:0002371,1.53e-09,16;UBERON:0001474,7.52e-09,22;UBERON:0004765,7.52e-09,22;UBERON:0001434,7.52e-09,22;UBERON:0002390,9.04e-07,45;UBERON:0003061,9.04e-07,45;UBERON:0002384,9.23e-07,46 | |||
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| ||
|short_description=p2@Mgat1 | |||
}} | }} |
Latest revision as of 14:26, 1 October 2015
Short description: | p2@Mgat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mgat1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129541, ENSMUST00000149406, NM_001110150, uc007iqe.1_5end |
EntrezGene: | Mgat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.48e-10 | 54 |
common myeloid progenitor | 3.99e-07 | 19 |
migratory neural crest cell | 8.26e-07 | 10 |
neuron associated cell | 8.26e-07 | 10 |
glial cell (sensu Vertebrata) | 8.26e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.26e-07 | 10 |
glial cell | 8.26e-07 | 10 |
glioblast | 8.26e-07 | 10 |
glioblast (sensu Vertebrata) | 8.26e-07 | 10 |
connective tissue cell | 9.23e-07 | 46 |
mesenchymal cell | 9.23e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.37e-13 | 32 |
mesoderm | 5.31e-11 | 120 |
mesoderm-derived structure | 5.31e-11 | 120 |
presumptive mesoderm | 5.31e-11 | 120 |
lateral plate mesoderm | 1.22e-09 | 87 |
bone marrow | 1.53e-09 | 16 |
bone element | 7.52e-09 | 22 |
skeletal element | 7.52e-09 | 22 |
skeletal system | 7.52e-09 | 22 |
hematopoietic system | 9.04e-07 | 45 |
blood island | 9.04e-07 | 45 |
connective tissue | 9.23e-07 | 46 |