FFCP PHASE1:Mm9::chrX:133242583..133242603,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:133242583..133242603,+ to FFCP PHASE1:Mm9::chrX:133242583..133242603,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=237052 | |EntrezGene=237052 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AEC4,Q921P9 | |UniProt=A2AEC4,Q921P9 | ||
|association_with_transcript=0bp_to_NM_146236,uc009uit.1_5end | |||
|cluster_id=chrX:133242583..133242603,+ | |||
|description=CAGE_peak_2_at_Tceal1_5end | |||
|id=chrX:133242583..133242603,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.09e-11!23;CL:0000337!1.09e-11!23;CL:0000221!8.37e-11!44;CL:0000133!8.37e-11!44;CL:0002319!1.86e-10!43;CL:0000540!3.41e-10!33;CL:0000047!3.41e-10!33;CL:0000031!3.41e-10!33;CL:0000404!3.41e-10!33;CL:0000055!9.23e-10!50;CL:0000393!3.36e-09!39;CL:0000211!3.36e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.75e-13,23;CL:0000337,7.75e-13,23;CL:0000221,1.34e-10,44;CL:0000133,1.34e-10,44;CL:0002319,3.18e-10,43;CL:0000540,6.18e-10,33;CL:0000047,6.18e-10,33;CL:0000031,6.18e-10,33;CL:0000404,6.18e-10,33;CL:0000393,3.60e-09,39;CL:0000211,3.60e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.55e-28!73;UBERON:0005743!9.55e-28!73;UBERON:0000073!2.72e-26!75;UBERON:0001016!2.72e-26!75;UBERON:0002346!5.56e-25!71;UBERON:0003075!5.56e-25!71;UBERON:0007284!5.56e-25!71;UBERON:0001049!3.51e-24!52;UBERON:0005068!3.51e-24!52;UBERON:0006241!3.51e-24!52;UBERON:0007135!3.51e-24!52;UBERON:0000033!3.95e-24!63;UBERON:0000955!4.83e-23!50;UBERON:0006238!4.83e-23!50;UBERON:0004121!1.03e-22!102;UBERON:0000924!1.03e-22!102;UBERON:0006601!1.03e-22!102;UBERON:0002616!2.75e-22!49;UBERON:0003056!2.53e-19!49;UBERON:0003080!1.41e-17!40;UBERON:0002020!2.95e-17!34;UBERON:0002780!7.47e-17!39;UBERON:0001890!7.47e-17!39;UBERON:0006240!7.47e-17!39;UBERON:0002791!3.49e-14!29;UBERON:0003528!3.49e-14!29;UBERON:0001893!3.49e-14!29;UBERON:0000956!1.32e-09!21;UBERON:0001869!1.32e-09!21;UBERON:0000203!1.32e-09!21;UBERON:0000153!2.97e-09!94;UBERON:0000025!7.42e-09!114;UBERON:0002619!1.11e-08!17;UBERON:0007811!1.30e-08!86;UBERON:0004111!2.14e-08!122;UBERON:0003076!3.18e-07!12;UBERON:0003057!3.18e-07!12;UBERON:0002021!7.29e-07!10;UBERON:0000411!7.29e-07!10;UBERON:0001950!7.29e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.95e-29,73;UBERON:0000073,6.54e-28,54;UBERON:0002346,1.50e-27,64;UBERON:0003075,1.50e-27,64;UBERON:0007284,1.50e-27,64;UBERON:0001016,4.60e-27,75;UBERON:0001049,2.54e-26,52;UBERON:0005068,2.54e-26,52;UBERON:0006241,2.54e-26,52;UBERON:0007135,2.54e-26,52;UBERON:0004121,1.50e-23,95;UBERON:0000924,1.50e-23,95;UBERON:0006601,1.50e-23,95;UBERON:0010371,2.70e-23,73;UBERON:0000955,8.05e-23,47;UBERON:0006238,8.05e-23,47;UBERON:0002616,5.32e-22,46;UBERON:0003056,6.00e-21,49;UBERON:0010314,1.27e-19,92;UBERON:0002020,4.90e-19,34;UBERON:0003080,5.46e-19,40;UBERON:0002780,3.47e-18,39;UBERON:0001890,3.47e-18,39;UBERON:0006240,3.47e-18,39;UBERON:0003528,1.30e-15,29;UBERON:0002791,1.30e-15,29;UBERON:0001893,1.30e-15,29;UBERON:0000956,1.62e-10,21;UBERON:0001869,1.62e-10,21;UBERON:0000203,1.62e-10,21;UBERON:0002619,1.73e-09,17;UBERON:0003076,7.21e-08,12;UBERON:0003057,7.21e-08,12;UBERON:0000025,8.13e-08,114;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10;UBERON:0004111,2.59e-07,122 | |||
|phase1_expression=4.16387002472464,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,2.8064285749853,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,2.51793635951155,2.02753862439029,2.56965453026354,1.56478268869608,3.70642765846759,4.39372365468944,2.91644848611425,1.1198913730029,7.18762821824858,0.167782606057736,0,0,0.257259436035947,1.43266719969378,0,6.27181028664753,5.28990979272033,5.70448263155561,0.338844532069132,0,0.449949858640699,0,0,1.19840044207362,2.30530983192933,2.28117147078651,2.29510095163874,2.73422449756797,11.7116903605559,11.9269012113871,1.83736198822431,2.20444583341944,2.75765635983006,8.8092704799511,9.06580100404833,9.67721159514334,6.85808696197008,7.77644970620482,8.33461392890816,12.0048689570594,12.9435400307286,15.4326230254578,6.48182888042069,7.68807076315156,6.33758115806022,0.151452386666368,0.529000920747499,1.44932244350839,1.72084775396277,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.258937883647172,2.3750742250372,0.520455980298408,1.21786191324856,0.691846491768175,2.11011696773672,2.58695155698551,1.88499886994513,0,0.433798070759735,0,3.558870698843,0.662524555381181,1.93950101254089,1.86391761218122,4.09893115816166,6.0739544975902,0,1.07833612055328,1.19980546198682,0.635351135365324,16.1773890557209,3.66000482254901,5.6544458450789,8.69121600961382,5.11430914660661,12.4672826735736,9.89671704713322,3.05518091550949,1.7416975885413,5.55990068554084,1.47309299120532,1.82168620147785,3.67843367093557,3.06105620669094,2.41127708537144,2.38127747029647,2.8185018462667,2.52994656311268,3.62184719034622,1.07783996466421,1.70195472151037,2.46331573829528,2.6303487891309,1.94633074457919,2.43776516565517,2.26360350048738,0.398068533636986,0.702213187313235,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,0.720248245844059,1.42046841351126,0.983821158737019,1.3884040159864,1.16266972375204,1.07309360559848,1.5179494507732,1.31647879930784,0.656669856316381,1.05389452409612,0.877199924551994,0.658650345873152,0.805238512562231,10.3042074796422,5.35103984372279,0,0.264450566663544,0.853153002140936,1.39342003116263,1.28867461322093,1.21010114774006,0.889512175379481,1.33157938278791,0,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0,0.398282546508734,1.89667900953082,1.5994791765362,0,1.4255592949172,1.35766741017338,1.40271639780637,2.21327879934901,1.47610147979602,1.255989822731,1.72756029490521,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0.964887042726734,0.923765950833023,1.51593129416388,1.46668478797823,0.848725428875941,2.58159273117352,0.837531287209079,0.476087281772027,0.585400943573396,1.57635144106191,1.55025282754142,1.11618338060241,0.655453258862952,1.55416483679306,0.867894351489069,1.50791283939272,0,0,0,9.9541365792431,10.6662634798905,0.983609672260053,0.252470927204373,1.57754109708128,0.780877488593277,1.93881057959519,0.716906393857656,0.668396022247182,0.849229592366497,2.02405350837447,1.46127928955656,2.37172666767914,13.1741739732941,1.41940085208269,0.534196811001766,1.46598263418218,0.989820737835213,0,0.485561272309963,0.906970670894253,0.754420319023592,0,0,0.516856586336442,0.727067458955011,1.06949213515416,0,0,1.03135543248187,4.08527526904546,3.06103859853227,0.776152102696527,2.35770738534752,3.3694644392032,2.67553226403106,2.46823530903181,3.95804433848979,0.469343416127421,0.847328283455281,1.10264199027481,0.98931751764888,1.13025098687134,0.663442174209714,0.358117032009409,0,0,7.41701208042039,0.170870880797853,1.44470807574256,0.925972636848558,0,0,0.228778173206523,1.01987057996313,1.6794174278839,1.10559979043539,0.954670618015114,1.10717597753397,1.82987520414164,1.40406943068342,1.46361807210128,1.09181281873089,0.809186078308924,0.991841468704031,0.523511883968059,1.03691978633434,0,0.56369293868419,2.24274819065968,0.827292452285488,0.583353565032143,1.03327858782185,2.70329800785245,2.22978753426933,2.0832701575032,1.57289016638566,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,1.15913756419314,2.064507229963,0.73260649706906,0.214368379079066,0.501572104035363,6.7770221114048,10.1271552031579,5.72895513439397,7.73339320546594,9.59115527678899,6.0431511791176,8.77529250301348,11.2580300806055,4.07828168085784,5.69536342927002,1.24544817101012,1.19707462020309,2.39027048055788,2.18796045361465,2.72497111416377,4.41224420280034,4.00044110042907,3.09052585858341,1.92551525755089,3.53776096469316,3.54871019846336,3.39527414494937,3.46473577638565,4.92993673517493,3.96304735793732,3.81034953026459,2.31768651889711,3.6652751888104,3.29668720642645,3.97437084362873,1.37147700954166,3.37204031702741,7.39152188836695,4.0696996657052,3.76437521661322,3.38458431566706,2.92684756596436,3.15683653725411,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,3.6830793885272,3.09873682371932,2.12197272079256,1.99848462350357,4.21076895201735,2.57845264857958,4.20834330551455,1.76473135295612,1.39120701372253 | |phase1_expression=4.16387002472464,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,2.8064285749853,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,2.51793635951155,2.02753862439029,2.56965453026354,1.56478268869608,3.70642765846759,4.39372365468944,2.91644848611425,1.1198913730029,7.18762821824858,0.167782606057736,0,0,0.257259436035947,1.43266719969378,0,6.27181028664753,5.28990979272033,5.70448263155561,0.338844532069132,0,0.449949858640699,0,0,1.19840044207362,2.30530983192933,2.28117147078651,2.29510095163874,2.73422449756797,11.7116903605559,11.9269012113871,1.83736198822431,2.20444583341944,2.75765635983006,8.8092704799511,9.06580100404833,9.67721159514334,6.85808696197008,7.77644970620482,8.33461392890816,12.0048689570594,12.9435400307286,15.4326230254578,6.48182888042069,7.68807076315156,6.33758115806022,0.151452386666368,0.529000920747499,1.44932244350839,1.72084775396277,0,0,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.35333957451034,3.66192891419369,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.258937883647172,2.3750742250372,0.520455980298408,1.21786191324856,0.691846491768175,2.11011696773672,2.58695155698551,1.88499886994513,0,0.433798070759735,0,3.558870698843,0.662524555381181,1.93950101254089,1.86391761218122,4.09893115816166,6.0739544975902,0,1.07833612055328,1.19980546198682,0.635351135365324,16.1773890557209,3.66000482254901,5.6544458450789,8.69121600961382,5.11430914660661,12.4672826735736,9.89671704713322,3.05518091550949,1.7416975885413,5.55990068554084,1.47309299120532,1.82168620147785,3.67843367093557,3.06105620669094,2.41127708537144,2.38127747029647,2.8185018462667,2.52994656311268,3.62184719034622,1.07783996466421,1.70195472151037,2.46331573829528,2.6303487891309,1.94633074457919,2.43776516565517,2.26360350048738,0.398068533636986,0.702213187313235,0.257347907114715,0.852490498186778,1.44988040774851,0.938104239924385,0.720248245844059,1.42046841351126,0.983821158737019,1.3884040159864,1.16266972375204,1.07309360559848,1.5179494507732,1.31647879930784,0.656669856316381,1.05389452409612,0.877199924551994,0.658650345873152,0.805238512562231,10.3042074796422,5.35103984372279,0,0.264450566663544,0.853153002140936,1.39342003116263,1.28867461322093,1.21010114774006,0.889512175379481,1.33157938278791,0,0.329397909448022,0.754005626400808,0.397912944082302,0.779856348476481,0.898819408654221,0,0.398282546508734,1.89667900953082,1.5994791765362,0,1.4255592949172,1.35766741017338,1.40271639780637,2.21327879934901,1.47610147979602,1.255989822731,1.72756029490521,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0.964887042726734,0.923765950833023,1.51593129416388,1.46668478797823,0.848725428875941,2.58159273117352,0.837531287209079,0.476087281772027,0.585400943573396,1.57635144106191,1.55025282754142,1.11618338060241,0.655453258862952,1.55416483679306,0.867894351489069,1.50791283939272,0,0,0,9.9541365792431,10.6662634798905,0.983609672260053,0.252470927204373,1.57754109708128,0.780877488593277,1.93881057959519,0.716906393857656,0.668396022247182,0.849229592366497,2.02405350837447,1.46127928955656,2.37172666767914,13.1741739732941,1.41940085208269,0.534196811001766,1.46598263418218,0.989820737835213,0,0.485561272309963,0.906970670894253,0.754420319023592,0,0,0.516856586336442,0.727067458955011,1.06949213515416,0,0,1.03135543248187,4.08527526904546,3.06103859853227,0.776152102696527,2.35770738534752,3.3694644392032,2.67553226403106,2.46823530903181,3.95804433848979,0.469343416127421,0.847328283455281,1.10264199027481,0.98931751764888,1.13025098687134,0.663442174209714,0.358117032009409,0,0,7.41701208042039,0.170870880797853,1.44470807574256,0.925972636848558,0,0,0.228778173206523,1.01987057996313,1.6794174278839,1.10559979043539,0.954670618015114,1.10717597753397,1.82987520414164,1.40406943068342,1.46361807210128,1.09181281873089,0.809186078308924,0.991841468704031,0.523511883968059,1.03691978633434,0,0.56369293868419,2.24274819065968,0.827292452285488,0.583353565032143,1.03327858782185,2.70329800785245,2.22978753426933,2.0832701575032,1.57289016638566,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,0.410843828659309,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,1.15913756419314,2.064507229963,0.73260649706906,0.214368379079066,0.501572104035363,6.7770221114048,10.1271552031579,5.72895513439397,7.73339320546594,9.59115527678899,6.0431511791176,8.77529250301348,11.2580300806055,4.07828168085784,5.69536342927002,1.24544817101012,1.19707462020309,2.39027048055788,2.18796045361465,2.72497111416377,4.41224420280034,4.00044110042907,3.09052585858341,1.92551525755089,3.53776096469316,3.54871019846336,3.39527414494937,3.46473577638565,4.92993673517493,3.96304735793732,3.81034953026459,2.31768651889711,3.6652751888104,3.29668720642645,3.97437084362873,1.37147700954166,3.37204031702741,7.39152188836695,4.0696996657052,3.76437521661322,3.38458431566706,2.92684756596436,3.15683653725411,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,3.6830793885272,3.09873682371932,2.12197272079256,1.99848462350357,4.21076895201735,2.57845264857958,4.20834330551455,1.76473135295612,1.39120701372253 | ||
|short_description=p2@Tceal1 | |||
}} | }} |
Latest revision as of 14:41, 1 October 2015
Short description: | p2@Tceal1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tceal1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_146236, uc009uit.1_5end |
EntrezGene: | Tceal1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.75e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.75e-13 | 23 |
ectodermal cell | 1.34e-10 | 44 |
neurectodermal cell | 1.34e-10 | 44 |
neural cell | 3.18e-10 | 43 |
neuron | 6.18e-10 | 33 |
neuronal stem cell | 6.18e-10 | 33 |
neuroblast | 6.18e-10 | 33 |
electrically signaling cell | 6.18e-10 | 33 |
electrically responsive cell | 3.60e-09 | 39 |
electrically active cell | 3.60e-09 | 39 |