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FFCP PHASE1:Mm9::chr3:129883753..129883772,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77018
|EntrezGene=77018
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B2RQR7,G3X9H6,E9Q5L6
|UniProt=B2RQR7,G3X9H6,E9Q5L6
|association_with_transcript=0bp_to_NM_001244952,NM_029838,NM_198711_5end
|association_with_transcript=0bp_to_NM_001244952,NM_029838,NM_198711_5end
|cluster_id=chr3:129883753..129883772,+
|description=CAGE_peak_2_at_Col25a1_5end
|description=CAGE_peak_2_at_Col25a1_5end
|id=chr3:129883753..129883772,+
|id=chr3:129883753..129883772,+
|ontology_enrichment_celltype=CL:0000540!1.19e-10!33;CL:0000047!1.19e-10!33;CL:0000031!1.19e-10!33;CL:0000404!1.19e-10!33;CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39
|ontology_enrichment_celltype=CL:0000540!1.19e-10!33;CL:0000047!1.19e-10!33;CL:0000031!1.19e-10!33;CL:0000404!1.19e-10!33;CL:0000117!1.11e-07!23;CL:0000337!1.11e-07!23;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,4.23e-12,33;CL:0000047,4.23e-12,33;CL:0000031,4.23e-12,33;CL:0000404,4.23e-12,33;CL:0000117,2.15e-09,23;CL:0000337,2.15e-09,23;CL:0000393,4.36e-09,39;CL:0000211,4.36e-09,39;CL:0002319,2.10e-08,43;CL:0000221,4.76e-08,44;CL:0000133,4.76e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.18e-16!73;UBERON:0005743!6.18e-16!73;UBERON:0000073!4.06e-15!75;UBERON:0001016!4.06e-15!75;UBERON:0002346!3.03e-13!71;UBERON:0003075!3.03e-13!71;UBERON:0007284!3.03e-13!71;UBERON:0004121!2.06e-12!102;UBERON:0000924!2.06e-12!102;UBERON:0006601!2.06e-12!102;UBERON:0001049!7.92e-12!52;UBERON:0005068!7.92e-12!52;UBERON:0006241!7.92e-12!52;UBERON:0007135!7.92e-12!52;UBERON:0000955!1.31e-11!50;UBERON:0006238!1.31e-11!50;UBERON:0002616!2.15e-11!49;UBERON:0000033!1.05e-10!63;UBERON:0003080!4.78e-10!40;UBERON:0003056!1.13e-09!49;UBERON:0002780!1.97e-09!39;UBERON:0001890!1.97e-09!39;UBERON:0006240!1.97e-09!39;UBERON:0002020!3.86e-08!34;UBERON:0000468!1.40e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-19,73;UBERON:0001016,3.59e-18,75;UBERON:0000073,1.12e-16,54;UBERON:0001049,1.60e-14,52;UBERON:0005068,1.60e-14,52;UBERON:0006241,1.60e-14,52;UBERON:0007135,1.60e-14,52;UBERON:0002346,5.84e-14,64;UBERON:0003075,5.84e-14,64;UBERON:0007284,5.84e-14,64;UBERON:0004121,1.38e-12,95;UBERON:0000924,1.38e-12,95;UBERON:0006601,1.38e-12,95;UBERON:0010371,8.71e-12,73;UBERON:0002616,8.72e-12,46;UBERON:0000955,2.44e-11,47;UBERON:0006238,2.44e-11,47;UBERON:0003080,2.99e-11,40;UBERON:0002780,2.14e-10,39;UBERON:0001890,2.14e-10,39;UBERON:0006240,2.14e-10,39;UBERON:0003056,4.02e-09,49;UBERON:0002020,8.96e-09,34;UBERON:0002420,3.84e-08,8;UBERON:0007245,3.84e-08,8;UBERON:0010009,3.84e-08,8;UBERON:0010011,3.84e-08,8;UBERON:0000454,3.84e-08,8;UBERON:0010314,4.07e-08,92;UBERON:0002102,1.59e-07,7;UBERON:0004710,1.59e-07,7;UBERON:0005419,1.59e-07,7;UBERON:0005417,1.59e-07,7;UBERON:0005729,1.59e-07,7;UBERON:0003528,8.04e-07,29;UBERON:0002791,8.04e-07,29;UBERON:0001893,8.04e-07,29
|phase1_expression=4.64431656603902,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,1.10434270475807,1.10241719293459,1.15014565221884,0.919218786610021,5.50579404996943,5.74593021383345,5.22262213071228,1.97829431595291,2.19570344645783,1.04182674111352,2.23346399201105,2.25105044012672,4.12555268997387,0.589257170947335,2.98980529678116,2.23679334990361,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,1.38788261412909,0.608930956624282,0.691846491768175,1.3565037649736,0.940709657085638,0,0,0,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,5.69204429738326,6.40500843946077,4.27224797183739,5.04090528557602,5.11430914660661,5.194701113989,8.59878694259116,1.01839363850316,0.248813941220186,0,0,1.30120442962704,0.229902104433473,0.360124259610698,0.753524089178575,1.02054748726992,0.2562274405697,0.281105173679186,0.776110112217047,2.80238390812695,3.59301552318857,4.04687585577082,1.97276159184817,2.78047249225598,2.43776516565517,1.64625709126355,2.18937693500343,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0,0.329119699826961,0,0.405344047729279,0.146199987425332,0.219550115291051,0,5.25724871410318,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.685491075658373,2.25415471346161,1.01825663922657,0.775809948670503,0.771494018793504,0.126473074248515,0.147610147979602,0,0,0,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0,1.70542270593436,0.977789858652155,1.35796068620151,1.40814148973101,2.01007508930179,1.90434912708811,1.95133647857799,1.89162172927429,0.664394068946325,0.637819074629948,0,0,0,0,0,0,0,2.0871576698413,2.69586879162067,0,0,1.57754109708128,1.56175497718655,1.93881057959519,3.10659437338318,1.11399337041197,0.566153061577665,0.809621403349789,0.292255857911312,1.97643888973262,0.963963949265421,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,1.08036656418786,1.55230420539305,1.28602221018955,0.532020700926821,1.60531935841864,1.81003922662333,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.603129249281559,0.477489376012546,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.790839983952838,1.01659733563424,0.86404272657441,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0,0.259229946583586,0,0,1.19613236835183,1.15820943319968,1.94451188344048,1.80823752868824,2.36538575687089,1.99507305697782,1.17183946359555,0.524296722128554,0,0.288030006257865,0,0.405450430580328,1.02710957164827,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,1.73870634628971,0,0,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.859265911718438,4.11049511862385,0,2.02506750069542,3.15224842256954,2.26571204492102,2.5888015587591,0.62272408550506,3.59122386060928,2.04880326904961,1.21553358534147,0.419226325255965,0.551530525350042,1.33348036680969,1.23621034343337,0.320919209591815,0.758091635291392,2.02783439912192,0.565879024158229,0.936415074698824,0.89635213366817,1.03383844120104,3.33405583898152,0.811190281613988,0.964546102318525,0,1.76638704161277,1.02860775715625,0.354951612318675,0.715308569841963,0.436039249896986,0.941093804153306,0.930760686808441,0.73171189149109,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,0.886540341380071,2.04615521584845,0.929621047115796,0.385813221962283,1.24905288968973,1.16965804222704,1.07435527024149,1.3390183244819,1.10295709559758,0.231867835620421
|phase1_expression=4.64431656603902,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0.135005938331691,0,2.28520787523043,1.10434270475807,1.10241719293459,1.15014565221884,0.919218786610021,5.50579404996943,5.74593021383345,5.22262213071228,1.97829431595291,2.19570344645783,1.04182674111352,2.23346399201105,2.25105044012672,4.12555268997387,0.589257170947335,2.98980529678116,2.23679334990361,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,1.38788261412909,0.608930956624282,0.691846491768175,1.3565037649736,0.940709657085638,0,0,0,0,1.13236794963186,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,5.69204429738326,6.40500843946077,4.27224797183739,5.04090528557602,5.11430914660661,5.194701113989,8.59878694259116,1.01839363850316,0.248813941220186,0,0,1.30120442962704,0.229902104433473,0.360124259610698,0.753524089178575,1.02054748726992,0.2562274405697,0.281105173679186,0.776110112217047,2.80238390812695,3.59301552318857,4.04687585577082,1.97276159184817,2.78047249225598,2.43776516565517,1.64625709126355,2.18937693500343,0,0,0,0.414251545071004,0.703578179943289,0.36012412292203,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0,0.329119699826961,0,0.405344047729279,0.146199987425332,0.219550115291051,0,5.25724871410318,0.720332286654991,0,0,0.853153002140936,1.39342003116263,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.685491075658373,2.25415471346161,1.01825663922657,0.775809948670503,0.771494018793504,0.126473074248515,0.147610147979602,0,0,0,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0,1.70542270593436,0.977789858652155,1.35796068620151,1.40814148973101,2.01007508930179,1.90434912708811,1.95133647857799,1.89162172927429,0.664394068946325,0.637819074629948,0,0,0,0,0,0,0,2.0871576698413,2.69586879162067,0,0,1.57754109708128,1.56175497718655,1.93881057959519,3.10659437338318,1.11399337041197,0.566153061577665,0.809621403349789,0.292255857911312,1.97643888973262,0.963963949265421,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,1.06949213515416,0.316036757935816,0,0,1.36175842301515,1.08036656418786,1.55230420539305,1.28602221018955,0.532020700926821,1.60531935841864,1.81003922662333,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.603129249281559,0.477489376012546,0,0,1.66882771809459,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.790839983952838,1.01659733563424,0.86404272657441,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0,0.259229946583586,0,0,1.19613236835183,1.15820943319968,1.94451188344048,1.80823752868824,2.36538575687089,1.99507305697782,1.17183946359555,0.524296722128554,0,0.288030006257865,0,0.405450430580328,1.02710957164827,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,1.73870634628971,0,0,0.214368379079066,0,0.564751842617067,0.920650473014354,0.572895513439397,0.859265911718438,4.11049511862385,0,2.02506750069542,3.15224842256954,2.26571204492102,2.5888015587591,0.62272408550506,3.59122386060928,2.04880326904961,1.21553358534147,0.419226325255965,0.551530525350042,1.33348036680969,1.23621034343337,0.320919209591815,0.758091635291392,2.02783439912192,0.565879024158229,0.936415074698824,0.89635213366817,1.03383844120104,3.33405583898152,0.811190281613988,0.964546102318525,0,1.76638704161277,1.02860775715625,0.354951612318675,0.715308569841963,0.436039249896986,0.941093804153306,0.930760686808441,0.73171189149109,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,0.886540341380071,2.04615521584845,0.929621047115796,0.385813221962283,1.24905288968973,1.16965804222704,1.07435527024149,1.3390183244819,1.10295709559758,0.231867835620421
|short_description=p2@Col25a1
|short_description=p2@Col25a1
}}
}}

Latest revision as of 14:42, 1 October 2015

Short description:p2@Col25a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Col25a1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_001244952, NM_029838, NM_198711_5end
EntrezGene:Col25a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Col25a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E24.05
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.23e-1233
neuronal stem cell4.23e-1233
neuroblast4.23e-1233
electrically signaling cell4.23e-1233
CNS neuron (sensu Vertebrata)2.15e-0923
neuroblast (sensu Vertebrata)2.15e-0923
electrically responsive cell4.36e-0939
electrically active cell4.36e-0939
neural cell2.10e-0843
ectodermal cell4.76e-0844
neurectodermal cell4.76e-0844

Uber anatomy
Ontology termp-valuen
central nervous system4.34e-1973
nervous system3.59e-1875
regional part of nervous system1.12e-1654
neural tube1.60e-1452
neural rod1.60e-1452
future spinal cord1.60e-1452
neural keel1.60e-1452
neurectoderm5.84e-1464
neural plate5.84e-1464
presumptive neural plate5.84e-1464
ectoderm-derived structure1.38e-1295
ectoderm1.38e-1295
presumptive ectoderm1.38e-1295
ecto-epithelium8.71e-1273
regional part of brain8.72e-1246
brain2.44e-1147
future brain2.44e-1147
anterior neural tube2.99e-1140
regional part of forebrain2.14e-1039
forebrain2.14e-1039
future forebrain2.14e-1039
pre-chordal neural plate4.02e-0949
gray matter8.96e-0934
basal ganglion3.84e-088
nuclear complex of neuraxis3.84e-088
aggregate regional part of brain3.84e-088
collection of basal ganglia3.84e-088
cerebral subcortex3.84e-088
structure with developmental contribution from neural crest4.07e-0892
forelimb1.59e-077
pectoral appendage1.59e-077
pectoral appendage bud1.59e-077
forelimb bud1.59e-077
forelimb/pectoral fin field1.59e-077
brain grey matter8.04e-0729
regional part of telencephalon8.04e-0729
telencephalon8.04e-0729
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