FFCP PHASE1:Mm9::chr18:67293367..67293388,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:67293367..67293388,+ to FFCP PHASE1:Mm9::chr18:67293367..67293388,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14680 | |EntrezGene=14680 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=288 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C040 | |UniProt=Q8C040 | ||
|association_with_transcript=-15bp_to_ENSMUST00000171457_5end | |||
|cluster_id=chr18:67293367..67293388,+ | |||
|description=CAGE_peak_5_at_Gnal_5end | |||
|id=chr18:67293367..67293388,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.40e-11!23;CL:0000337!4.40e-11!23;CL:0000540!5.16e-07!33;CL:0000047!5.16e-07!33;CL:0000031!5.16e-07!33;CL:0000404!5.16e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.19e-08,3;CL:0002608,1.60e-08,3;CL:0000117,1.19e-07,23;CL:0000337,1.19e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-24!52;UBERON:0005068!1.24e-24!52;UBERON:0006241!1.24e-24!52;UBERON:0007135!1.24e-24!52;UBERON:0002020!1.18e-21!34;UBERON:0000955!5.17e-21!50;UBERON:0006238!5.17e-21!50;UBERON:0002616!5.94e-20!49;UBERON:0000073!1.88e-19!75;UBERON:0001016!1.88e-19!75;UBERON:0001017!1.99e-19!73;UBERON:0005743!1.99e-19!73;UBERON:0002791!1.11e-16!29;UBERON:0003528!1.11e-16!29;UBERON:0001893!1.11e-16!29;UBERON:0002346!1.90e-16!71;UBERON:0003075!1.90e-16!71;UBERON:0007284!1.90e-16!71;UBERON:0003080!2.62e-15!40;UBERON:0000033!3.63e-15!63;UBERON:0002780!1.60e-14!39;UBERON:0001890!1.60e-14!39;UBERON:0006240!1.60e-14!39;UBERON:0000956!1.62e-13!21;UBERON:0001869!1.62e-13!21;UBERON:0000203!1.62e-13!21;UBERON:0003056!9.70e-12!49;UBERON:0004121!2.43e-11!102;UBERON:0000924!2.43e-11!102;UBERON:0006601!2.43e-11!102;UBERON:0002619!6.02e-11!17;UBERON:0003076!1.57e-10!12;UBERON:0003057!1.57e-10!12;UBERON:0002021!1.97e-08!10;UBERON:0000411!1.97e-08!10;UBERON:0001950!1.97e-08!10;UBERON:0007811!3.23e-08!86;UBERON:0002240!3.14e-07!6;UBERON:0005174!3.14e-07!6;UBERON:0001137!3.14e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-19,54;UBERON:0002020,5.71e-19,34;UBERON:0001049,2.30e-18,52;UBERON:0005068,2.30e-18,52;UBERON:0006241,2.30e-18,52;UBERON:0007135,2.30e-18,52;UBERON:0000955,8.53e-15,47;UBERON:0006238,8.53e-15,47;UBERON:0001017,1.23e-14,73;UBERON:0001016,4.17e-14,75;UBERON:0002346,5.15e-14,64;UBERON:0003075,5.15e-14,64;UBERON:0007284,5.15e-14,64;UBERON:0002616,2.56e-13,46;UBERON:0003528,7.30e-13,29;UBERON:0002791,7.30e-13,29;UBERON:0001893,7.30e-13,29;UBERON:0002780,2.99e-12,39;UBERON:0001890,2.99e-12,39;UBERON:0006240,2.99e-12,39;UBERON:0003080,7.35e-12,40;UBERON:0010371,1.08e-11,73;UBERON:0002619,4.96e-11,17;UBERON:0000956,9.34e-11,21;UBERON:0001869,9.34e-11,21;UBERON:0000203,9.34e-11,21;UBERON:0004121,4.85e-10,95;UBERON:0000924,4.85e-10,95;UBERON:0006601,4.85e-10,95;UBERON:0003056,4.50e-09,49;UBERON:0001948,1.04e-08,5;UBERON:0002315,1.04e-08,5;UBERON:0002257,1.19e-08,3;UBERON:0010314,2.65e-08,92;UBERON:0003076,1.06e-07,12;UBERON:0003057,1.06e-07,12;UBERON:0002240,2.95e-07,6;UBERON:0005174,2.95e-07,6;UBERON:0001137,2.95e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.71390590642282,0.662605622854841,2.69479758272899,1.43768206527355,1.83843757322004,0,1.91531007127782,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,1.06958773443767,2.94628585473668,1.85083185038834,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.97948742945565,0,0,0,0,0.898743836428936,11.4375150704657,9.1727677042391,2.08589184230732,2.30143911597297,2.0778804455956,2.75810147215188,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,2.57057053137446,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,2.25900737046827,0.920650473014354,3.43737308063638,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,0.45032120322422,0,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,1.10306105070008,0.666740183404846,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.704276676453562,0.804096565378586,1.90517476513229,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0,0.887379030796687,0.715308569841963,0.726732083161643,1.03520318456864,1.18460451048347,1.28049581010941,0.789209134313529,0.543216455383447,1.12228454331548,0.593175090620871,0.689531376628944,0,1.54936841185966,0.385813221962283,0.999242311751784,0.701794825336225,1.28922632428979,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.210324961351382,1.71390590642282,0.662605622854841,2.69479758272899,1.43768206527355,1.83843757322004,0,1.91531007127782,0.46081959976873,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,1.06958773443767,2.94628585473668,1.85083185038834,1.4911955666024,0,0.0755715601067855,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.97948742945565,0,0,0,0,0.898743836428936,11.4375150704657,9.1727677042391,2.08589184230732,2.30143911597297,2.0778804455956,2.75810147215188,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,2.57057053137446,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,2.25900737046827,0.920650473014354,3.43737308063638,0.68741272937475,1.37016503954128,1.5107877947794,0.675022500231806,0.45032120322422,0,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,1.10306105070008,0.666740183404846,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,0.468207537349412,0.704276676453562,0.804096565378586,1.90517476513229,1.0429589335037,0.964546102318525,1.23625770240992,0.588795680537589,0,0.887379030796687,0.715308569841963,0.726732083161643,1.03520318456864,1.18460451048347,1.28049581010941,0.789209134313529,0.543216455383447,1.12228454331548,0.593175090620871,0.689531376628944,0,1.54936841185966,0.385813221962283,0.999242311751784,0.701794825336225,1.28922632428979,0,0,0 | ||
|short_description=p5@Gnal | |||
}} | }} |
Latest revision as of 16:03, 1 October 2015
Short description: | p5@Gnal |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gnal_5end |
Coexpression cluster: | MCL_coexpression_mm9:288 |
Association with transcript: | -15bp_to_ENSMUST00000171457_5end |
EntrezGene: | Gnal |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.19e-08 | 3 |
hippocampal neuron | 1.60e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.19e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-07 | 23 |