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FFCP PHASE1:Mm9::chr3:135354375..135354381,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:135354375..135354381,- |short_description=p10@Nfkb1 |description=CAGE_peak_10_at_Nfkb1_5end |association_with_transcript=128bp_to_ENSMUST00000029812_5end ...")
 
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{{FFCP
{{FFCP
|id=chr3:135354375..135354381,-
|DHSsupport=NA
|short_description=p10@Nfkb1
|DPIdataset=NA
|description=CAGE_peak_10_at_Nfkb1_5end
|association_with_transcript=128bp_to_ENSMUST00000029812_5end
|EntrezGene=18033
|EntrezGene=18033
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=P25799
|UniProt=P25799
|association_with_transcript=128bp_to_ENSMUST00000029812_5end
|cluster_id=chr3:135354375..135354381,-
|description=CAGE_peak_10_at_Nfkb1_5end
|id=chr3:135354375..135354381,-
|ontology_enrichment_celltype=CL:0000063!8.08e-11!66;CL:0000838!5.06e-08!12;CL:0000988!7.63e-08!32;CL:0002032!7.63e-08!32;CL:0000037!7.63e-08!32;CL:0000566!7.63e-08!32;CL:0000837!7.63e-08!32;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000084!2.41e-07!11;CL:0000827!2.41e-07!11;CL:0002320!4.46e-07!46;CL:0000134!4.46e-07!46;CL:0000542!7.45e-07!13;CL:0000051!7.45e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000988,4.21e-18,32;CL:0002032,4.21e-18,32;CL:0000037,4.21e-18,32;CL:0000837,4.21e-18,32;CL:0000791,1.00e-16,9;CL:0000789,1.00e-16,9;CL:0002420,1.00e-16,9;CL:0002419,1.00e-16,9;CL:0000790,1.00e-16,9;CL:0000838,5.37e-15,12;CL:0000624,5.67e-15,8;CL:0002031,6.24e-14,25;CL:0002320,8.17e-14,46;CL:0000134,8.17e-14,46;CL:0000542,1.19e-13,13;CL:0000051,1.19e-13,13;CL:0000084,2.70e-13,11;CL:0000827,2.70e-13,11;CL:0000738,4.02e-12,17;CL:0002087,4.02e-12,17;CL:0000893,5.61e-12,6;CL:0002489,5.61e-12,6;CL:0000898,5.61e-12,6;CL:0000809,5.61e-12,6;CL:0000810,5.61e-12,6;CL:0000895,5.61e-12,6;CL:0000808,5.61e-12,6;CL:0000894,5.61e-12,6;CL:0000806,5.61e-12,6;CL:0000807,5.61e-12,6;CL:0000805,5.61e-12,6;CL:0002425,5.61e-12,6;CL:0002436,5.61e-12,6;CL:0002427,5.61e-12,6;CL:0002428,5.61e-12,6;CL:0002429,5.61e-12,6;CL:0002433,5.61e-12,6;CL:0002431,5.61e-12,6;CL:0002432,5.61e-12,6;CL:0000219,6.61e-11,54;CL:0000034,1.12e-08,97;CL:0000723,4.03e-07,91;CL:0000048,4.03e-07,91;CL:0000049,6.33e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!6.05e-14!48;UBERON:0002390!8.36e-13!45;UBERON:0003061!8.36e-13!45;UBERON:0003081!7.23e-10!88;UBERON:0004177!4.97e-09!29;UBERON:0002405!6.33e-09!70;UBERON:0001004!3.33e-08!42;UBERON:0000065!6.07e-08!41;UBERON:0003408!1.49e-07!24;UBERON:0000072!2.02e-07!27;UBERON:0002370!2.70e-07!23;UBERON:0000974!2.70e-07!23;UBERON:0004807!2.70e-07!23;UBERON:0005058!2.70e-07!23;UBERON:0003351!2.70e-07!23;UBERON:0009113!2.70e-07!23;UBERON:0003295!2.70e-07!23;UBERON:0009722!2.70e-07!23;UBERON:0005562!2.70e-07!23;UBERON:0007690!2.70e-07!23;UBERON:0002384!4.46e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.17e-14,46;UBERON:0002193,1.24e-12,48;UBERON:0002405,1.24e-12,48;UBERON:0002390,3.08e-11,45;UBERON:0003061,3.08e-11,45;UBERON:0002204,8.20e-08,32;UBERON:0002371,2.93e-07,16
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,0,0.500895729946347,1.00727563147134,0.934450562382103,2.58246646883153,24.3564489322383,27.1514850533512,5.99262888789267,8.05698805852898,1.71200729931206,1.92324885321794,0.666219523631325,1.01237633694913,0,2.20823515750766,2.19383093769182,1.69755860719212,0.0850432901510698,0.893618560807968,0.261199789138935,1.27993938234725,0.45881856213434,2.29692785646008,1.29228598847722,1.07735616342945,0.380046838912748,0,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,2.09265815368454,4.6880120671428,2.09409497589519,1.17646297606203,3.41522742479223,2.91306211818692,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.419959264876088,0,3.18786951509699,1.45072428402269,3.02484419228218,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.599200221036809,0,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0.302904773332736,0.226714680320357,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.170430322578058,0,0,0.14084341977668,1.28326477414318,2.54805239706646,0,1.5154372870785,0.506719730950197,0.505524445014783,0.22836775943812,1.29468941823586,0.148442139064825,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.86759614151947,2.65383165584962,0.323533699894818,0.441683036920787,0,3.72783522436244,0.292780797011547,0,1.02182822083437,1.1981512450592,1.79970819298022,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0.870848794270651,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0,0,0,0.278047249225598,0,0,0,1.40442637462647,0.772043721344145,1.13665399758237,0,0,0.36012412292203,0,0,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0,0.492502392237286,0.486412857275134,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0.660837565967596,0.793351699990633,0,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0.754005626400808,0,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,0.147610147979602,0,0,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,1.47802552133284,0,0.162964976442026,0,0,0.670025029767263,1.42826184531608,0.390267295715598,0.472905432318573,0.221464689648775,1.43509291791738,0.491589944147214,0.863424909329478,0.867894351489069,0,3.26343410291226,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,2.22132145037209,0.82554747185289,0.740778109478847,0.376736914009382,0.410082683163076,1.14389086603261,2.54967644990783,1.39951452323658,2.3493995546752,0,0.158167996790568,0.609958401380546,0,0,0,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,1.58005560314089,0.405450430580328,0.821687657318618,0.25984164595559,0.537080087002444,0.39736270956253,0.841368146639782,0.590758108698309,0.201932899896295,0.457240839929999,0.604957110821043,0.584747284438515,0.288635524920988,0.935015217452552,0,0,0.0897138566094757,0,0.579568782096571,0.563047426353546,0.73260649706906,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0,0,0,0,0,0
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,0,0.500895729946347,1.00727563147134,0.934450562382103,2.58246646883153,24.3564489322383,27.1514850533512,5.99262888789267,8.05698805852898,1.71200729931206,1.92324885321794,0.666219523631325,1.01237633694913,0,2.20823515750766,2.19383093769182,1.69755860719212,0.0850432901510698,0.893618560807968,0.261199789138935,1.27993938234725,0.45881856213434,2.29692785646008,1.29228598847722,1.07735616342945,0.380046838912748,0,0.443461021310609,0,0,0,0.866554859253824,0.166234645358492,0.408338712524738,2.09265815368454,4.6880120671428,2.09409497589519,1.17646297606203,3.41522742479223,2.91306211818692,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0,0.194429899074283,0.419959264876088,0,3.18786951509699,1.45072428402269,3.02484419228218,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.599200221036809,0,0.207379224616955,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0.302904773332736,0.226714680320357,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,0.170430322578058,0,0,0.14084341977668,1.28326477414318,2.54805239706646,0,1.5154372870785,0.506719730950197,0.505524445014783,0.22836775943812,1.29468941823586,0.148442139064825,0,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.86759614151947,2.65383165584962,0.323533699894818,0.441683036920787,0,3.72783522436244,0.292780797011547,0,1.02182822083437,1.1981512450592,1.79970819298022,1.14363204365758,0,0,0,0,0,0.20778804455956,0,0.305518091550949,0.870848794270651,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0.431135985865684,0,0,0,0.278047249225598,0,0,0,1.40442637462647,0.772043721344145,1.13665399758237,0,0,0.36012412292203,0,0,0.154267112887378,0.465067889500816,0.536546802799238,0.350296027101508,0,0.492502392237286,0.486412857275134,0.292399974850665,0.658650345873152,0.134206418760372,0,0,0.660837565967596,0.793351699990633,0,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0.754005626400808,0,0.58489226135736,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,0.147610147979602,0,0,0,0.333690211432188,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0.538192240565737,0,1.47802552133284,0,0.162964976442026,0,0,0.670025029767263,1.42826184531608,0.390267295715598,0.472905432318573,0.221464689648775,1.43509291791738,0.491589944147214,0.863424909329478,0.867894351489069,0,3.26343410291226,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0,0.395287777946524,0,0.425820255624806,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.32977250588296,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,2.22132145037209,0.82554747185289,0.740778109478847,0.376736914009382,0.410082683163076,1.14389086603261,2.54967644990783,1.39951452323658,2.3493995546752,0,0.158167996790568,0.609958401380546,0,0,0,0.269728692769641,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,1.58005560314089,0.405450430580328,0.821687657318618,0.25984164595559,0.537080087002444,0.39736270956253,0.841368146639782,0.590758108698309,0.201932899896295,0.457240839929999,0.604957110821043,0.584747284438515,0.288635524920988,0.935015217452552,0,0,0.0897138566094757,0,0.579568782096571,0.563047426353546,0.73260649706906,0.857473516316263,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.666740183404846,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0,0,0,0,0,0
|short_description=p10@Nfkb1
}}
}}

Latest revision as of 16:06, 1 October 2015

Short description:p10@Nfkb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Nfkb1_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 128bp_to_ENSMUST00000029812_5end
EntrezGene:Nfkb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Nfkb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell4.21e-1832
hematopoietic oligopotent progenitor cell4.21e-1832
hematopoietic stem cell4.21e-1832
hematopoietic multipotent progenitor cell4.21e-1832
mature alpha-beta T cell1.00e-169
alpha-beta T cell1.00e-169
immature T cell1.00e-169
mature T cell1.00e-169
immature alpha-beta T cell1.00e-169
lymphoid lineage restricted progenitor cell5.37e-1512
CD4-positive, alpha-beta T cell5.67e-158
hematopoietic lineage restricted progenitor cell6.24e-1425
connective tissue cell8.17e-1446
mesenchymal cell8.17e-1446
lymphocyte1.19e-1313
common lymphoid progenitor1.19e-1313
T cell2.70e-1311
pro-T cell2.70e-1311
leukocyte4.02e-1217
nongranular leukocyte4.02e-1217
thymocyte5.61e-126
double negative thymocyte5.61e-126
naive T cell5.61e-126
double-positive, alpha-beta thymocyte5.61e-126
CD4-positive, alpha-beta thymocyte5.61e-126
naive thymus-derived CD4-positive, alpha-beta T cell5.61e-126
DN4 thymocyte5.61e-126
DN1 thymic pro-T cell5.61e-126
DN2 thymocyte5.61e-126
DN3 thymocyte5.61e-126
immature single positive thymocyte5.61e-126
early T lineage precursor5.61e-126
mature CD4 single-positive thymocyte5.61e-126
resting double-positive thymocyte5.61e-126
double-positive blast5.61e-126
CD69-positive double-positive thymocyte5.61e-126
CD69-positive, CD4-positive single-positive thymocyte5.61e-126
CD4-positive, CD8-intermediate double-positive thymocyte5.61e-126
CD24-positive, CD4 single-positive thymocyte5.61e-126
motile cell6.61e-1154
stem cell1.12e-0897
somatic stem cell4.03e-0791
multi fate stem cell4.03e-0791
common myeloid progenitor6.33e-0719

Uber anatomy
Ontology termp-valuen
connective tissue8.17e-1446
hemolymphoid system1.24e-1248
immune system1.24e-1248
hematopoietic system3.08e-1145
blood island3.08e-1145
musculoskeletal system8.20e-0832
bone marrow2.93e-0716
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