FFCP PHASE1:Mm9::chr16:16560239..16560290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224014 | |EntrezGene=224014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=403 | |MCL_coexpression_id=403 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q4V3,Q91ZT5 | |UniProt=E9Q4V3,Q91ZT5 | ||
|association_with_transcript=0bp_to_ENSMUST00000172181,NM_139232,NM_139234,uc007yiq.1,uc007yit.1,uc007yiu.1,uc012abn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000172181,NM_139232,NM_139234,uc007yiq.1,uc007yit.1,uc007yiu.1,uc012abn.1_5end | ||
|cluster_id=chr16:16560239..16560290,- | |||
|description=CAGE_peak_3_at_Fgd4_5end | |description=CAGE_peak_3_at_Fgd4_5end | ||
|id=chr16:16560239..16560290,- | |id=chr16:16560239..16560290,- | ||
|ontology_enrichment_celltype=CL:0000221!6.17e-14!44;CL:0000133!6.17e-14!44;CL:0002319!1.90e-13!43;CL:0000540!8.84e-13!33;CL:0000047!8.84e-13!33;CL:0000031!8.84e-13!33;CL:0000404!8.84e-13!33;CL:0000055!8.55e-11!50;CL:0000393!1.84e-10!39;CL:0000211!1.84e-10!39;CL:0000117!5.39e-08!23;CL:0000337!5.39e-08!23 | |ontology_enrichment_celltype=CL:0000221!6.17e-14!44;CL:0000133!6.17e-14!44;CL:0002319!1.90e-13!43;CL:0000540!8.84e-13!33;CL:0000047!8.84e-13!33;CL:0000031!8.84e-13!33;CL:0000404!8.84e-13!33;CL:0000055!8.55e-11!50;CL:0000393!1.84e-10!39;CL:0000211!1.84e-10!39;CL:0000117!5.39e-08!23;CL:0000337!5.39e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.88e-15,44;CL:0000133,1.88e-15,44;CL:0002319,7.10e-15,43;CL:0000540,2.29e-14,33;CL:0000047,2.29e-14,33;CL:0000031,2.29e-14,33;CL:0000404,2.29e-14,33;CL:0000393,4.75e-11,39;CL:0000211,4.75e-11,39;CL:0000117,1.08e-08,23;CL:0000337,1.08e-08,23;CL:0000107,4.11e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.85e-32!102;UBERON:0000924!2.85e-32!102;UBERON:0006601!2.85e-32!102;UBERON:0000073!2.92e-29!75;UBERON:0001016!2.92e-29!75;UBERON:0002346!4.84e-29!71;UBERON:0003075!4.84e-29!71;UBERON:0007284!4.84e-29!71;UBERON:0001017!7.50e-28!73;UBERON:0005743!7.50e-28!73;UBERON:0000033!5.53e-27!63;UBERON:0003056!1.23e-23!49;UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!1.55e-20!50;UBERON:0006238!1.55e-20!50;UBERON:0002616!7.89e-20!49;UBERON:0003080!2.21e-17!40;UBERON:0002780!6.77e-17!39;UBERON:0001890!6.77e-17!39;UBERON:0006240!6.77e-17!39;UBERON:0002020!1.64e-14!34;UBERON:0002791!3.54e-13!29;UBERON:0003528!3.54e-13!29;UBERON:0001893!3.54e-13!29;UBERON:0000153!2.38e-12!94;UBERON:0007811!5.73e-12!86;UBERON:0000956!5.57e-11!21;UBERON:0001869!5.57e-11!21;UBERON:0000203!5.57e-11!21;UBERON:0002619!5.51e-09!17;UBERON:0000010!2.42e-07!11;UBERON:0000970!3.01e-07!9;UBERON:0000019!3.01e-07!9;UBERON:0000047!3.01e-07!9;UBERON:0004088!3.01e-07!9;UBERON:0002104!3.01e-07!9;UBERON:0001456!3.01e-07!9;UBERON:0003072!3.01e-07!9;UBERON:0003071!3.01e-07!9;UBERON:0004128!3.01e-07!9;UBERON:0000020!5.06e-07!12;UBERON:0001032!5.06e-07!12;UBERON:0004456!5.06e-07!12;UBERON:0000468!8.22e-07!333 | |ontology_enrichment_uberon=UBERON:0004121!2.85e-32!102;UBERON:0000924!2.85e-32!102;UBERON:0006601!2.85e-32!102;UBERON:0000073!2.92e-29!75;UBERON:0001016!2.92e-29!75;UBERON:0002346!4.84e-29!71;UBERON:0003075!4.84e-29!71;UBERON:0007284!4.84e-29!71;UBERON:0001017!7.50e-28!73;UBERON:0005743!7.50e-28!73;UBERON:0000033!5.53e-27!63;UBERON:0003056!1.23e-23!49;UBERON:0001049!1.06e-20!52;UBERON:0005068!1.06e-20!52;UBERON:0006241!1.06e-20!52;UBERON:0007135!1.06e-20!52;UBERON:0000955!1.55e-20!50;UBERON:0006238!1.55e-20!50;UBERON:0002616!7.89e-20!49;UBERON:0003080!2.21e-17!40;UBERON:0002780!6.77e-17!39;UBERON:0001890!6.77e-17!39;UBERON:0006240!6.77e-17!39;UBERON:0002020!1.64e-14!34;UBERON:0002791!3.54e-13!29;UBERON:0003528!3.54e-13!29;UBERON:0001893!3.54e-13!29;UBERON:0000153!2.38e-12!94;UBERON:0007811!5.73e-12!86;UBERON:0000956!5.57e-11!21;UBERON:0001869!5.57e-11!21;UBERON:0000203!5.57e-11!21;UBERON:0002619!5.51e-09!17;UBERON:0000010!2.42e-07!11;UBERON:0000970!3.01e-07!9;UBERON:0000019!3.01e-07!9;UBERON:0000047!3.01e-07!9;UBERON:0004088!3.01e-07!9;UBERON:0002104!3.01e-07!9;UBERON:0001456!3.01e-07!9;UBERON:0003072!3.01e-07!9;UBERON:0003071!3.01e-07!9;UBERON:0004128!3.01e-07!9;UBERON:0000020!5.06e-07!12;UBERON:0001032!5.06e-07!12;UBERON:0004456!5.06e-07!12;UBERON:0000468!8.22e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.52e-35,95;UBERON:0000924,8.52e-35,95;UBERON:0006601,8.52e-35,95;UBERON:0001016,6.23e-33,75;UBERON:0002346,6.64e-33,64;UBERON:0003075,6.64e-33,64;UBERON:0007284,6.64e-33,64;UBERON:0001017,2.88e-31,73;UBERON:0010371,1.11e-28,73;UBERON:0003056,2.77e-27,49;UBERON:0000073,6.49e-24,54;UBERON:0001049,4.10e-23,52;UBERON:0005068,4.10e-23,52;UBERON:0006241,4.10e-23,52;UBERON:0007135,4.10e-23,52;UBERON:0000955,8.60e-23,47;UBERON:0006238,8.60e-23,47;UBERON:0002616,5.93e-22,46;UBERON:0010314,4.04e-21,92;UBERON:0003080,8.03e-20,40;UBERON:0002780,3.07e-19,39;UBERON:0001890,3.07e-19,39;UBERON:0006240,3.07e-19,39;UBERON:0002020,2.09e-16,34;UBERON:0003528,1.61e-15,29;UBERON:0002791,1.61e-15,29;UBERON:0001893,1.61e-15,29;UBERON:0000956,7.02e-13,21;UBERON:0001869,7.02e-13,21;UBERON:0000203,7.02e-13,21;UBERON:0002619,1.75e-10,17;UBERON:0000010,1.63e-08,11;UBERON:0000970,2.13e-08,9;UBERON:0000019,2.13e-08,9;UBERON:0000047,2.13e-08,9;UBERON:0010312,2.13e-08,9;UBERON:0004088,2.13e-08,9;UBERON:0002104,2.13e-08,9;UBERON:0001456,2.13e-08,9;UBERON:0003072,2.13e-08,9;UBERON:0004128,2.13e-08,9;UBERON:0003071,2.13e-08,9;UBERON:0000020,9.27e-08,12;UBERON:0001032,9.27e-08,12;UBERON:0004456,9.27e-08,12;UBERON:0002021,3.21e-07,10;UBERON:0000411,3.21e-07,10;UBERON:0001950,3.21e-07,10;UBERON:0002410,4.11e-07,9;UBERON:0000033,8.23e-07,13;UBERON:0005085,8.23e-07,13 | |||
|phase1_expression=2.40223270657191,0,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,2.56965453026354,1.56478268869608,2.18025156380447,1.75748946187577,3.4997381833371,0.839918529752175,1.43752564364972,0,0,0,0,0.286533439938757,0,2.02316460859598,4.7609188134483,3.80298842103708,1.0165335962074,0,0,0,0.7104801149461,0,2.30530983192933,10.0578923939223,5.8052553482627,5.04779907243317,0.856952953211411,3.97563373712904,6.1245399607477,3.92966431174769,8.27296907949019,3.30347642998166,2.80912143787413,3.37934373163736,3.95658863190582,3.93396867490361,6.25096044668112,1.3959149950069,1.12552522006336,5.19514042441154,4.41942878210502,7.68807076315156,3.54158947068071,8.70851223331617,10.3533037346296,0.869593466105033,0,3.39985666853875,0,1.29955283489534,0,0.561777680527007,0,0,0,6.19711047017394,0,0,0,0.216491041011214,0.506719730950197,0,0.34255163915718,0,2.67195850316685,1.21439728736295,1.82679286987285,2.07553947530453,1.80867168663147,1.52865319276416,0.502666365318702,0.247194967734374,0.144599356919912,0,0.647067399789637,0.220841518460394,0,1.86391761218122,24.3008061519584,25.9713916448684,0,0,0,0,5.54225365797844,4.11750542536764,8.54449594367478,6.95297280769106,4.60287823194595,3.94797284663164,5.19172041816825,0,0.124406970610093,0,8.41767423545896,6.11566081924707,9.42598628177239,14.2249082546226,17.3310540511072,19.7986212530364,27.4163361409579,21.3639931996182,21.7310831420773,1.72454394346274,5.48407632486676,2.11141348996739,0,3.05851974148158,4.179025998266,1.64625709126355,0.398068533636986,0,0.257347907114715,0,1.24275463521301,0.234526059981096,0.180062061461015,0.710234206755631,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,12.8276868624118,14.4066457330998,0,0.264450566663544,0.639864751605702,0.928946687441754,1.67527699718721,1.00841762311671,0.667134131534611,0.570676878337677,0,0.329397909448022,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.280543279561274,0,0.442830443938806,0.156998727841375,0.370191491765402,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,2.88991061978026,1.87538698547525,0.491804836130026,0.252470927204373,3.78609863299508,10.1514073517126,10.7711698866399,4.54040716109849,9.80314165962534,8.77537245445381,10.1202675418724,8.18316402151673,11.4633455604492,13.1741739732941,1.56134093729095,0.178065603667255,0,0,0,4.85561272309963,4.23252979750651,4.33791683438566,0.295301892880773,0.922305443831782,0.775284879504663,1.45413491791002,1.06949213515416,0,0,0,10.5536277783674,5.58189391497062,0.905510786479282,3.42939256050548,14.1872186913819,8.20496560969525,7.0756078858912,1.522324745573,0,0.42366414172764,0.220528398054962,0,1.61464426695906,0.361877549568935,0.238744688006273,0,0,1.8542530201051,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,6.68269432610579,1.26534397432454,2.43983360552218,2.16010681643603,0.627264888043406,0.655087691238533,1.34864346384821,1.32245529160537,3.92633912976044,0,0.621339313086926,0,0.897099276263873,0.330916980914195,0,0,0,0.234714477291508,0.13020438484395,0.734015410979976,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0.187682475451182,1.64836461840539,0.428736758158132,0,12.9892923801925,12.4287813856938,8.02053718815155,9.6237782112465,4.7955776383945,9.82012066606611,4.72515750162264,6.30449684513909,6.79713613476307,3.10656187051092,4.8780053364563,6.3843979744165,4.78054096111576,4.86213434136588,3.77303692730368,2.02227859295016,2.889207461421,2.06035057238894,3.20919209591815,2.02157769411038,2.28131369901216,4.33840585187975,3.183811253976,3.07320731543373,3.79074095107048,3.81034953026459,3.01299247456624,3.27945674788299,4.94503080963968,2.50238164228475,4.4573002810104,3.54951612318675,3.57654284920981,2.47088908274958,3.48204707536723,3.55381353145041,4.57319932181931,2.10455769150274,3.39510284614654,3.92799590160417,2.72860541685601,2.65962102414021,2.45538625901814,3.25367366490529,3.2794123866794,3.74715866906919,2.8071793013449,2.14871054048298,1.53030665655075,0.441182838239031,0.463735671240843 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| ||
|short_description=p3@Fgd4 | |short_description=p3@Fgd4 | ||
}} | }} |
Latest revision as of 16:12, 1 October 2015
Short description: | p3@Fgd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fgd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | 0bp_to_ENSMUST00000172181, NM_139232, NM_139234, uc007yiq.1, uc007yit.1, uc007yiu.1, uc012abn.1_5end |
EntrezGene: | Fgd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.88e-15 | 44 |
neurectodermal cell | 1.88e-15 | 44 |
neural cell | 7.10e-15 | 43 |
neuron | 2.29e-14 | 33 |
neuronal stem cell | 2.29e-14 | 33 |
neuroblast | 2.29e-14 | 33 |
electrically signaling cell | 2.29e-14 | 33 |
electrically responsive cell | 4.75e-11 | 39 |
electrically active cell | 4.75e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.08e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-08 | 23 |
autonomic neuron | 4.11e-07 | 9 |