FFCP PHASE1:Mm9::chrX:146893671..146893700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=382245 | |EntrezGene=382245 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2ANF5 | |UniProt=A2ANF5 | ||
|association_with_transcript=0bp_to_ENSMUST00000130339,ENSMUST00000148968,ENSMUST00000151067,ENSMUST00000155740,ENSMUST00000173996,NM_001164683,uc009uoh.2,uc012hqm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000130339,ENSMUST00000148968,ENSMUST00000151067,ENSMUST00000155740,ENSMUST00000173996,NM_001164683,uc009uoh.2,uc012hqm.1_5end | ||
|cluster_id=chrX:146893671..146893700,- | |||
|description=CAGE_peak_1_at_Tmem29_5end | |description=CAGE_peak_1_at_Tmem29_5end | ||
|id=chrX:146893671..146893700,- | |id=chrX:146893671..146893700,- | ||
|ontology_enrichment_celltype=CL:0000055!3.64e-16!50;CL:0000221!5.33e-16!44;CL:0000133!5.33e-16!44;CL:0002319!1.24e-15!43;CL:0000393!5.04e-13!39;CL:0000211!5.04e-13!39;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0002321!1.51e-11!70;CL:0000220!1.51e-11!70;CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23;CL:0000723!1.64e-07!91;CL:0000048!1.64e-07!91 | |ontology_enrichment_celltype=CL:0000055!3.64e-16!50;CL:0000221!5.33e-16!44;CL:0000133!5.33e-16!44;CL:0002319!1.24e-15!43;CL:0000393!5.04e-13!39;CL:0000211!5.04e-13!39;CL:0000540!2.32e-12!33;CL:0000047!2.32e-12!33;CL:0000031!2.32e-12!33;CL:0000404!2.32e-12!33;CL:0002321!1.51e-11!70;CL:0000220!1.51e-11!70;CL:0000117!2.67e-09!23;CL:0000337!2.67e-09!23;CL:0000723!1.64e-07!91;CL:0000048!1.64e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.33e-16,44;CL:0000133,5.33e-16,44;CL:0002319,1.24e-15,43;CL:0000393,5.04e-13,39;CL:0000211,5.04e-13,39;CL:0000540,2.32e-12,33;CL:0000047,2.32e-12,33;CL:0000031,2.32e-12,33;CL:0000404,2.32e-12,33;CL:0002321,1.51e-11,70;CL:0000117,2.67e-09,23;CL:0000337,2.67e-09,23;CL:0000723,1.64e-07,91;CL:0000048,1.64e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.46e-21!73;UBERON:0005743!2.46e-21!73;UBERON:0000073!1.07e-20!75;UBERON:0001016!1.07e-20!75;UBERON:0004121!7.63e-18!102;UBERON:0000924!7.63e-18!102;UBERON:0006601!7.63e-18!102;UBERON:0002020!1.47e-14!34;UBERON:0002346!7.40e-14!71;UBERON:0003075!7.40e-14!71;UBERON:0007284!7.40e-14!71;UBERON:0001049!1.19e-13!52;UBERON:0005068!1.19e-13!52;UBERON:0006241!1.19e-13!52;UBERON:0007135!1.19e-13!52;UBERON:0000033!1.32e-13!63;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0000955!3.77e-11!50;UBERON:0006238!3.77e-11!50;UBERON:0002616!1.02e-10!49;UBERON:0003056!4.25e-10!49;UBERON:0000956!1.65e-08!21;UBERON:0001869!1.65e-08!21;UBERON:0000203!1.65e-08!21;UBERON:0003080!1.73e-08!40;UBERON:0004111!1.94e-08!122;UBERON:0002780!2.21e-08!39;UBERON:0001890!2.21e-08!39;UBERON:0006240!2.21e-08!39;UBERON:0002619!4.13e-08!17;UBERON:0000025!1.26e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.46e-21,73;UBERON:0001016,1.07e-20,75;UBERON:0004121,2.46e-20,95;UBERON:0000924,2.46e-20,95;UBERON:0006601,2.46e-20,95;UBERON:0002346,1.15e-16,64;UBERON:0003075,1.15e-16,64;UBERON:0007284,1.15e-16,64;UBERON:0010371,1.67e-15,73;UBERON:0002020,1.47e-14,34;UBERON:0001049,1.19e-13,52;UBERON:0005068,1.19e-13,52;UBERON:0006241,1.19e-13,52;UBERON:0007135,1.19e-13,52;UBERON:0000073,1.29e-13,54;UBERON:0003528,2.42e-11,29;UBERON:0002791,2.42e-11,29;UBERON:0001893,2.42e-11,29;UBERON:0000955,8.68e-11,47;UBERON:0006238,8.68e-11,47;UBERON:0002616,2.35e-10,46;UBERON:0003056,4.25e-10,49;UBERON:0010314,6.51e-10,92;UBERON:0000956,1.65e-08,21;UBERON:0001869,1.65e-08,21;UBERON:0000203,1.65e-08,21;UBERON:0003080,1.73e-08,40;UBERON:0004111,1.94e-08,122;UBERON:0002780,2.21e-08,39;UBERON:0001890,2.21e-08,39;UBERON:0006240,2.21e-08,39;UBERON:0002619,4.13e-08,17;UBERON:0000025,1.26e-07,114 | |||
|phase1_expression=17.2960754873177,5.23463111459042,5.91499011206397,4.23449895829562,9.5170188689806,6.37941233265181,6.30754129607919,6.06879620175408,1.83025338797167,1.87251621057595,3.08192342805909,3.11111420081812,2.39681021903688,4.72070173062586,7.32841475994458,17.0079224607454,12.5921138063066,11.0411757875383,12.2031845909108,11.4585205985468,9.86502165752409,9.33334941288322,10.4479915655574,9.5995453676044,12.15869189656,8.6134794617253,10.3382879078178,6.03319451520489,9.88121781173144,7.56090389279792,8.64748991555688,5.71527606113668,7.38077745101484,15.8481681015439,13.5760261283099,12.1351291111699,9.59595974433135,11.7188856606334,14.0640362014284,23.0350447348471,17.0587131528994,18.442228093878,21.8479658864019,10.1976422560218,9.7321853970734,13.0318194034794,19.559783608701,28.343270329458,28.3395175727469,33.4419426407767,22.9577731465595,23.0004102983955,12.4159128482725,2.17608642603403,5.04140698713696,28.0412785279182,20.3438742356517,18.0485232297105,18.0061650165042,25.3915670050576,19.0149421051854,19.9918273920788,25.789549087223,15.2982951937838,13.8441290759376,8.5257613793532,12.8828047522914,18.0582603501131,13.6870288247191,12.5555522648472,14.302097371894,31.4216082844184,27.3876990780001,15.3113499018693,12.9391385874619,21.1420320920305,8.8092704799511,19.1531007127782,19.3544231902867,15.1669230889723,15.5528994124096,21.3574481928272,18.9844439320939,20.8222165711722,18.6413862287708,28.8736013764194,38.1556104541596,21.063137378259,10.5259408733126,10.1265890543093,13.6236309689789,11.185510400758,8.15965600449301,20.5087212822371,24.6915038630114,17.9210754838934,12.2186645514624,16.7021716126497,20.0035223544209,18.3736578745377,16.6195235336483,1.28326477414318,2.54805239706646,0,24.4634876342672,21.0288688344332,24.2651733607096,9.24889425724386,6.21450920753212,6.53145411885229,11.6235168933311,11.2652226975492,7.14908041493781,11.4549206819993,9.28950786372068,8.41966161908826,4.94389935468748,11.1341504828332,8.84610551949874,7.44127509758082,9.71702681225732,15.5160081003271,20.5030937339934,15.2246014446005,13.1951425292477,10.2182822083437,6.94927722134338,9.59844369589452,8.89491589511453,13.0317856282196,14.1825186873774,15.4554853098823,15.2965401769203,15.3429274398198,10.389402227978,15.0884374653015,11.3041693873851,10.698999472468,13.3943061969848,20.8337437327609,12.751803410345,14.2539304748753,13.3245976055958,12.8099095160358,12.7908618404496,12.9394857487698,13.0245397138023,18.1092359517311,9.91612767491074,12.4810012910761,14.2520410572799,11.1789823538063,16.9608822027615,12.1888258282758,11.9353639116607,10.3497818745616,9.12877143507205,8.23513302767089,8.52490498186778,10.7705401718461,10.5536726991493,9.18316513451176,10.4167683657493,9.83821158737019,8.33042409591843,9.30135779001631,8.85302224618743,8.99093136227205,7.24063339619314,9.68588038066662,4.53985333456792,5.4093995347373,8.34290438105992,6.1734952629771,16.4026159880019,20.272208638719,5.94753809370836,8.72686869989696,15.3567540385368,14.8631469990681,10.8248667510558,9.88249270654378,13.1203045868473,8.94060442729028,8.54152310780121,7.5761519173045,6.28338022000674,7.75930240960488,9.74820435595601,7.19055526923377,13.8328351919804,9.16049856970089,11.7594098590911,13.481324487948,13.5249282807697,14.8665469327079,13.1887691273986,11.1515953625607,10.4340286255025,14.0229640580622,15.071877872772,7.28043267138623,12.7474629647474,11.6791574001266,11.0073037263394,10.1187950573184,9.12870546248263,9.88826354984909,9.93040821947537,9.78166867332756,5.0261920300261,12.3552635934637,7.18841032636773,10.0478055870496,16.2259590019572,17.1753637004036,14.1723956682311,10.1313139486307,9.05290631816363,13.8328730592454,12.385338209594,12.9006265189143,12.4385831592906,12.3954630506944,11.1880511216426,5.26860849216057,11.3497303756458,12.6234873099802,11.4807433433391,10.8149787712387,11.9152637487468,7.23245292907558,25.6345182696763,27.1952841909355,25.5717421969899,13.5209005689319,15.412856638828,15.1203075703942,11.3115112309906,7.57412781613119,16.0909191902291,21.0836921920185,16.5876016254255,13.860190281248,14.9275111635204,14.7199796010193,15.382806663646,16.9508397588561,17.392662229647,19.2792789853084,14.1940085208269,7.83488656135923,10.9134262766896,16.332042174281,5.30980553359851,12.624593080059,9.06970670894253,10.5618844663303,3.54362271456927,5.53383266299069,6.71913562237375,8.72480950746013,8.19943970284859,7.26884543252377,9.48767477174989,1.03135543248187,9.53230896110606,12.6042765821917,7.50280365939976,8.3591443662321,11.5271151867478,10.8804978737263,16.1258040190079,5.78483403317739,11.2642419870581,8.04961869282517,11.467476698858,10.8824926941377,6.45857706783622,10.9769523369244,6.56547892017251,6.89391778929257,11.3677526285642,17.4299783889879,9.22702756308404,8.87463532241857,9.4449208958553,10.5486335922627,12.0290920394502,10.066239621087,5.26933132980952,6.85762116385924,6.35719879500349,12.4107180341965,7.75023184273782,10.775931757723,1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|phase1_expression=17.2960754873177,5.23463111459042,5.91499011206397,4.23449895829562,9.5170188689806,6.37941233265181,6.30754129607919,6.06879620175408,1.83025338797167,1.87251621057595,3.08192342805909,3.11111420081812,2.39681021903688,4.72070173062586,7.32841475994458,17.0079224607454,12.5921138063066,11.0411757875383,12.2031845909108,11.4585205985468,9.86502165752409,9.33334941288322,10.4479915655574,9.5995453676044,12.15869189656,8.6134794617253,10.3382879078178,6.03319451520489,9.88121781173144,7.56090389279792,8.64748991555688,5.71527606113668,7.38077745101484,15.8481681015439,13.5760261283099,12.1351291111699,9.59595974433135,11.7188856606334,14.0640362014284,23.0350447348471,17.0587131528994,18.442228093878,21.8479658864019,10.1976422560218,9.7321853970734,13.0318194034794,19.559783608701,28.343270329458,28.3395175727469,33.4419426407767,22.9577731465595,23.0004102983955,12.4159128482725,2.17608642603403,5.04140698713696,28.0412785279182,20.3438742356517,18.0485232297105,18.0061650165042,25.3915670050576,19.0149421051854,19.9918273920788,25.789549087223,15.2982951937838,13.8441290759376,8.5257613793532,12.8828047522914,18.0582603501131,13.6870288247191,12.5555522648472,14.302097371894,31.4216082844184,27.3876990780001,15.3113499018693,12.9391385874619,21.1420320920305,8.8092704799511,19.1531007127782,19.3544231902867,15.1669230889723,15.5528994124096,21.3574481928272,18.9844439320939,20.8222165711722,18.6413862287708,28.8736013764194,38.1556104541596,21.063137378259,10.5259408733126,10.1265890543093,13.6236309689789,11.185510400758,8.15965600449301,20.5087212822371,24.6915038630114,17.9210754838934,12.2186645514624,16.7021716126497,20.0035223544209,18.3736578745377,16.6195235336483,1.28326477414318,2.54805239706646,0,24.4634876342672,21.0288688344332,24.2651733607096,9.24889425724386,6.21450920753212,6.53145411885229,11.6235168933311,11.2652226975492,7.14908041493781,11.4549206819993,9.28950786372068,8.41966161908826,4.94389935468748,11.1341504828332,8.84610551949874,7.44127509758082,9.71702681225732,15.5160081003271,20.5030937339934,15.2246014446005,13.1951425292477,10.2182822083437,6.94927722134338,9.59844369589452,8.89491589511453,13.0317856282196,14.1825186873774,15.4554853098823,15.2965401769203,15.3429274398198,10.389402227978,15.0884374653015,11.3041693873851,10.698999472468,13.3943061969848,20.8337437327609,12.751803410345,14.2539304748753,13.3245976055958,12.8099095160358,12.7908618404496,12.9394857487698,13.0245397138023,18.1092359517311,9.91612767491074,12.4810012910761,14.2520410572799,11.1789823538063,16.9608822027615,12.1888258282758,11.9353639116607,10.3497818745616,9.12877143507205,8.23513302767089,8.52490498186778,10.7705401718461,10.5536726991493,9.18316513451176,10.4167683657493,9.83821158737019,8.33042409591843,9.30135779001631,8.85302224618743,8.99093136227205,7.24063339619314,9.68588038066662,4.53985333456792,5.4093995347373,8.34290438105992,6.1734952629771,16.4026159880019,20.272208638719,5.94753809370836,8.72686869989696,15.3567540385368,14.8631469990681,10.8248667510558,9.88249270654378,13.1203045868473,8.94060442729028,8.54152310780121,7.5761519173045,6.28338022000674,7.75930240960488,9.74820435595601,7.19055526923377,13.8328351919804,9.16049856970089,11.7594098590911,13.481324487948,13.5249282807697,14.8665469327079,13.1887691273986,11.1515953625607,10.4340286255025,14.0229640580622,15.071877872772,7.28043267138623,12.7474629647474,11.6791574001266,11.0073037263394,10.1187950573184,9.12870546248263,9.88826354984909,9.93040821947537,9.78166867332756,5.0261920300261,12.3552635934637,7.18841032636773,10.0478055870496,16.2259590019572,17.1753637004036,14.1723956682311,10.1313139486307,9.05290631816363,13.8328730592454,12.385338209594,12.9006265189143,12.4385831592906,12.3954630506944,11.1880511216426,5.26860849216057,11.3497303756458,12.6234873099802,11.4807433433391,10.8149787712387,11.9152637487468,7.23245292907558,25.6345182696763,27.1952841909355,25.5717421969899,13.5209005689319,15.412856638828,15.1203075703942,11.3115112309906,7.57412781613119,16.0909191902291,21.0836921920185,16.5876016254255,13.860190281248,14.9275111635204,14.7199796010193,15.382806663646,16.9508397588561,17.392662229647,19.2792789853084,14.1940085208269,7.83488656135923,10.9134262766896,16.332042174281,5.30980553359851,12.624593080059,9.06970670894253,10.5618844663303,3.54362271456927,5.53383266299069,6.71913562237375,8.72480950746013,8.19943970284859,7.26884543252377,9.48767477174989,1.03135543248187,9.53230896110606,12.6042765821917,7.50280365939976,8.3591443662321,11.5271151867478,10.8804978737263,16.1258040190079,5.78483403317739,11.2642419870581,8.04961869282517,11.467476698858,10.8824926941377,6.45857706783622,10.9769523369244,6.56547892017251,6.89391778929257,11.3677526285642,17.4299783889879,9.22702756308404,8.87463532241857,9.4449208958553,10.5486335922627,12.0290920394502,10.066239621087,5.26933132980952,6.85762116385924,6.35719879500349,12.4107180341965,7.75023184273782,10.775931757723,1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| ||
|short_description=p1@Tmem29 | |short_description=p1@Tmem29 | ||
}} | }} |
Latest revision as of 16:22, 1 October 2015
Short description: | p1@Tmem29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem29_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000130339, ENSMUST00000148968, ENSMUST00000151067, ENSMUST00000155740, ENSMUST00000173996, NM_001164683, uc009uoh.2, uc012hqm.1_5end |
EntrezGene: | Tmem29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.33e-16 | 44 |
neurectodermal cell | 5.33e-16 | 44 |
neural cell | 1.24e-15 | 43 |
electrically responsive cell | 5.04e-13 | 39 |
electrically active cell | 5.04e-13 | 39 |
neuron | 2.32e-12 | 33 |
neuronal stem cell | 2.32e-12 | 33 |
neuroblast | 2.32e-12 | 33 |
electrically signaling cell | 2.32e-12 | 33 |
embryonic cell | 1.51e-11 | 70 |
CNS neuron (sensu Vertebrata) | 2.67e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.67e-09 | 23 |
somatic stem cell | 1.64e-07 | 91 |
multi fate stem cell | 1.64e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.46e-21 | 73 |
nervous system | 1.07e-20 | 75 |
ectoderm-derived structure | 2.46e-20 | 95 |
ectoderm | 2.46e-20 | 95 |
presumptive ectoderm | 2.46e-20 | 95 |
neurectoderm | 1.15e-16 | 64 |
neural plate | 1.15e-16 | 64 |
presumptive neural plate | 1.15e-16 | 64 |
ecto-epithelium | 1.67e-15 | 73 |
gray matter | 1.47e-14 | 34 |
neural tube | 1.19e-13 | 52 |
neural rod | 1.19e-13 | 52 |
future spinal cord | 1.19e-13 | 52 |
neural keel | 1.19e-13 | 52 |
regional part of nervous system | 1.29e-13 | 54 |
brain grey matter | 2.42e-11 | 29 |
regional part of telencephalon | 2.42e-11 | 29 |
telencephalon | 2.42e-11 | 29 |
brain | 8.68e-11 | 47 |
future brain | 8.68e-11 | 47 |
regional part of brain | 2.35e-10 | 46 |
pre-chordal neural plate | 4.25e-10 | 49 |
structure with developmental contribution from neural crest | 6.51e-10 | 92 |
cerebral cortex | 1.65e-08 | 21 |
cerebral hemisphere | 1.65e-08 | 21 |
pallium | 1.65e-08 | 21 |
anterior neural tube | 1.73e-08 | 40 |
anatomical conduit | 1.94e-08 | 122 |
regional part of forebrain | 2.21e-08 | 39 |
forebrain | 2.21e-08 | 39 |
future forebrain | 2.21e-08 | 39 |
regional part of cerebral cortex | 4.13e-08 | 17 |
tube | 1.26e-07 | 114 |