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FFCP PHASE1:Mm9::chr16:17646606..17646623,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72315
|EntrezGene=72315
|HGNC=
|HGNC=
|MCL_coexpression_id=204
|TSSclassifier=NA
|UniProt=E9Q9U8
|UniProt=E9Q9U8
|association_with_transcript=43bp_to_ENSMUST00000056962,NM_001166164,uc012abv.1_5end
|association_with_transcript=43bp_to_ENSMUST00000056962,NM_001166164,uc012abv.1_5end
|cluster_id=chr16:17646606..17646623,+
|description=CAGE_peak_2_at_Ccdc74a_5end
|description=CAGE_peak_2_at_Ccdc74a_5end
|id=chr16:17646606..17646623,+
|id=chr16:17646606..17646623,+
|ontology_enrichment_celltype=CL:0000221!4.58e-08!44;CL:0000133!4.58e-08!44;CL:0002319!1.08e-07!43;CL:0000117!3.16e-07!23;CL:0000337!3.16e-07!23;CL:0000055!5.35e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002453,1.95e-11,8;CL:0000221,7.86e-09,44;CL:0000133,7.86e-09,44;CL:0000333,9.94e-09,10;CL:0000095,9.94e-09,10;CL:0000243,9.94e-09,10;CL:0000123,9.94e-09,10;CL:0000125,9.94e-09,10;CL:0000030,9.94e-09,10;CL:0000339,9.94e-09,10;CL:0000128,1.32e-08,6;CL:0000126,1.32e-08,6;CL:0000127,1.32e-08,6;CL:0002319,3.09e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.20e-22!102;UBERON:0000924!4.20e-22!102;UBERON:0006601!4.20e-22!102;UBERON:0000033!1.17e-21!63;UBERON:0001049!1.14e-20!52;UBERON:0005068!1.14e-20!52;UBERON:0006241!1.14e-20!52;UBERON:0007135!1.14e-20!52;UBERON:0001017!3.25e-20!73;UBERON:0005743!3.25e-20!73;UBERON:0000073!8.32e-20!75;UBERON:0001016!8.32e-20!75;UBERON:0002616!1.91e-19!49;UBERON:0000955!1.67e-18!50;UBERON:0006238!1.67e-18!50;UBERON:0002346!2.12e-18!71;UBERON:0003075!2.12e-18!71;UBERON:0007284!2.12e-18!71;UBERON:0003056!2.69e-17!49;UBERON:0003080!3.02e-14!40;UBERON:0002780!8.29e-14!39;UBERON:0001890!8.29e-14!39;UBERON:0006240!8.29e-14!39;UBERON:0002020!1.72e-13!34;UBERON:0002791!1.68e-11!29;UBERON:0003528!1.68e-11!29;UBERON:0001893!1.68e-11!29;UBERON:0007811!7.16e-11!86;UBERON:0000153!1.02e-10!94;UBERON:0000956!2.41e-08!21;UBERON:0001869!2.41e-08!21;UBERON:0000203!2.41e-08!21;UBERON:0002619!4.95e-08!17;UBERON:0003076!2.67e-07!12;UBERON:0003057!2.67e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.82e-26,95;UBERON:0000924,8.82e-26,95;UBERON:0006601,8.82e-26,95;UBERON:0001017,3.86e-25,73;UBERON:0000073,6.82e-25,54;UBERON:0001016,4.16e-24,75;UBERON:0001049,3.40e-23,52;UBERON:0005068,3.40e-23,52;UBERON:0006241,3.40e-23,52;UBERON:0007135,3.40e-23,52;UBERON:0010371,4.02e-23,73;UBERON:0002346,8.39e-22,64;UBERON:0003075,8.39e-22,64;UBERON:0007284,8.39e-22,64;UBERON:0002616,2.17e-20,46;UBERON:0000955,9.56e-20,47;UBERON:0006238,9.56e-20,47;UBERON:0002020,1.48e-15,34;UBERON:0003056,7.36e-15,49;UBERON:0003080,1.89e-14,40;UBERON:0010314,3.52e-14,92;UBERON:0003528,5.34e-14,29;UBERON:0002791,5.34e-14,29;UBERON:0001893,5.34e-14,29;UBERON:0002780,1.01e-13,39;UBERON:0001890,1.01e-13,39;UBERON:0006240,1.01e-13,39;UBERON:0002619,4.31e-10,17;UBERON:0003076,5.62e-10,12;UBERON:0003057,5.62e-10,12;UBERON:0000956,5.29e-09,21;UBERON:0001869,5.29e-09,21;UBERON:0000203,5.29e-09,21;UBERON:0002021,1.88e-08,10;UBERON:0000411,1.88e-08,10;UBERON:0001950,1.88e-08,10;UBERON:0004733,3.42e-08,6;UBERON:0004732,3.42e-08,6;UBERON:0002028,3.42e-08,6;UBERON:0007277,3.42e-08,6;UBERON:0000025,9.62e-08,114;UBERON:0004111,9.87e-08,122
|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.174840804837995,1.33243904726265,0.809901069559304,3.49780939064073,0,0,0,1.7008658030214,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,4.69434806608824,2.18025156380447,4.83309602015838,4.47188767870852,1.81982348112971,7.18762821824858,0,0,0,0,0.286533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0.7104801149461,16.7776061890307,53.0221261343745,0.311068836925433,0.405017814995072,0.420649922702764,5.14171771926846,4.63823935998388,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.93680877595932,2.30409799884365,1.58263545276233,0.365950574409639,1.04182674111352,1.3959149950069,3.37657566019008,2.90316670775939,1.17851434189467,0.711858403995515,0.559198337475902,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,2.12003744706204,1.54927761754349,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0,0,4.9772735491963,4.81727425670947,0,0,0,0,1.49790639404823,1.37250180845588,2.26177833803156,3.12883776346098,3.83573185995496,3.32460871295296,1.62241263067758,0.407357455401265,0.746441823660558,1.76905930903572,0.631325567659422,0.780722657776222,1.14951052216736,1.98068342785884,0.60281927134286,2.51735046859913,0.768682321709099,0.937017245597288,1.29351685369508,0.215567992932842,0,0.175951124163949,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.99550902271842,1.9551876352064,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0,0.704070744865506,0.670025029767263,1.42826184531608,1.17080188714679,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,6.39293554924747,3.58717770196152,2.40825884981688,1.52375192569864,1.3114795630134,0,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.425820255624806,0.35613120733451,0.651547837414304,0,0,0,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.720244376125241,1.16422815404479,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,2.74018454203139,0,0,0,0.8244312647074,0.161464426695906,0.422190474497091,0.358117032009409,0.656563598980245,0,2.78137953015765,1.36696704638282,0.412773735926445,0.185194527369712,0.565105371014073,1.0935538217682,0.686334519619568,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,5.07323644815771,0.299033092087958,0.330916980914195,0.583353565032143,0.129159823477731,0,0,0,0,2.41584120826006,2.01621004380506,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,2.30162618253588,1.14579102687879,3.26521046453006,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401031,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.640251524048693,0.574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,0.789209134313529,0,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.499621155875892,0,0.429742108096597,1.14772999241306,0.220591419119515,0.927471342481686
|phase1_expression=1.92178616525753,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0.174840804837995,1.33243904726265,0.809901069559304,3.49780939064073,0,0,0,1.7008658030214,0.198581902401771,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.367093504323363,4.69434806608824,2.18025156380447,4.83309602015838,4.47188767870852,1.81982348112971,7.18762821824858,0,0,0,0,0.286533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,0,0,0.7104801149461,16.7776061890307,53.0221261343745,0.311068836925433,0.405017814995072,0.420649922702764,5.14171771926846,4.63823935998388,0.489963196859816,0.191690942036473,0.919218786610021,1.10115880999389,2.93680877595932,2.30409799884365,1.58263545276233,0.365950574409639,1.04182674111352,1.3959149950069,3.37657566019008,2.90316670775939,1.17851434189467,0.711858403995515,0.559198337475902,0.151452386666368,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,2.12003744706204,1.54927761754349,2.56652954828636,0,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0,1.97755974187499,0,0,0.323533699894818,0.220841518460394,0,0,4.9772735491963,4.81727425670947,0,0,0,0,1.49790639404823,1.37250180845588,2.26177833803156,3.12883776346098,3.83573185995496,3.32460871295296,1.62241263067758,0.407357455401265,0.746441823660558,1.76905930903572,0.631325567659422,0.780722657776222,1.14951052216736,1.98068342785884,0.60281927134286,2.51735046859913,0.768682321709099,0.937017245597288,1.29351685369508,0.215567992932842,0,0.175951124163949,0.876782929710299,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.99550902271842,1.9551876352064,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,0,0,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.193952487167626,0.420814919341911,0,0.147610147979602,0,0,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0,0.704070744865506,0.670025029767263,1.42826184531608,1.17080188714679,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0,0,0,6.39293554924747,3.58717770196152,2.40825884981688,1.52375192569864,1.3114795630134,0,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.425820255624806,0.35613120733451,0.651547837414304,0,0,0,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.720244376125241,1.16422815404479,0.428674070063185,0.354680467284547,0.535106452806212,0.329098041204242,2.74018454203139,0,0,0,0.8244312647074,0.161464426695906,0.422190474497091,0.358117032009409,0.656563598980245,0,2.78137953015765,1.36696704638282,0.412773735926445,0.185194527369712,0.565105371014073,1.0935538217682,0.686334519619568,0,0.139951452323658,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.247960367176008,0,0,0,5.07323644815771,0.299033092087958,0.330916980914195,0.583353565032143,0.129159823477731,0,0,0,0,2.41584120826006,2.01621004380506,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.448569283047378,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,2.25900737046827,2.30162618253588,1.14579102687879,3.26521046453006,2.05524755931193,0.755393897389701,2.70009000092722,1.80128481289688,1.35942722695261,1.55328093525546,0.207574695168353,0.399024873401031,0.170733605754134,0.486213434136588,0.838452650511929,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.640251524048693,0.574354689556133,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.658765662907314,0.423073039458382,0.548783918618318,0.789209134313529,0,0.561142271657738,0.355905054372522,0.492522411877817,0.818462086339379,0.77468420592983,0.192906610981141,0.499621155875892,0,0.429742108096597,1.14772999241306,0.220591419119515,0.927471342481686
|short_description=p2@Ccdc74a
|short_description=p2@Ccdc74a
}}
}}

Latest revision as of 16:45, 1 October 2015

Short description:p2@Ccdc74a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ccdc74a_5end
Coexpression cluster:MCL_coexpression_mm9:204
Association with transcript: 43bp_to_ENSMUST00000056962, NM_001166164, uc012abv.1_5end
EntrezGene:Ccdc74a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ccdc74a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E853.02
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure8.82e-2695
ectoderm8.82e-2695
presumptive ectoderm8.82e-2695
central nervous system3.86e-2573
regional part of nervous system6.82e-2554
nervous system4.16e-2475
neural tube3.40e-2352
neural rod3.40e-2352
future spinal cord3.40e-2352
neural keel3.40e-2352
ecto-epithelium4.02e-2373
neurectoderm8.39e-2264
neural plate8.39e-2264
presumptive neural plate8.39e-2264
regional part of brain2.17e-2046
brain9.56e-2047
future brain9.56e-2047
gray matter1.48e-1534
pre-chordal neural plate7.36e-1549
anterior neural tube1.89e-1440
structure with developmental contribution from neural crest3.52e-1492
brain grey matter5.34e-1429
regional part of telencephalon5.34e-1429
telencephalon5.34e-1429
regional part of forebrain1.01e-1339
forebrain1.01e-1339
future forebrain1.01e-1339
regional part of cerebral cortex4.31e-1017
posterior neural tube5.62e-1012
chordal neural plate5.62e-1012
cerebral cortex5.29e-0921
cerebral hemisphere5.29e-0921
pallium5.29e-0921
occipital lobe1.88e-0810
visual cortex1.88e-0810
neocortex1.88e-0810
segmental subdivision of hindbrain3.42e-086
segmental subdivision of nervous system3.42e-086
hindbrain3.42e-086
presumptive hindbrain3.42e-086
tube9.62e-08114
anatomical conduit9.87e-08122
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