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FFCP PHASE1:Mm9::chr1:89406881..89406948,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53972
|EntrezGene=53972
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q8CHT1
|UniProt=Q8CHT1
|association_with_transcript=0bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end
|association_with_transcript=0bp_to_ENSMUST00000027477,NM_019867,uc007bwx.2_5end
|cluster_id=chr1:89406881..89406948,-
|description=CAGE_peak_1_at_Ngef_5end
|description=CAGE_peak_1_at_Ngef_5end
|id=chr1:89406881..89406948,-
|id=chr1:89406881..89406948,-
|ontology_enrichment_celltype=CL:0000117!8.93e-12!23;CL:0000337!8.93e-12!23;CL:0002319!4.91e-08!43;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44
|ontology_enrichment_celltype=CL:0000117!8.93e-12!23;CL:0000337!8.93e-12!23;CL:0002319!4.91e-08!43;CL:0000221!1.20e-07!44;CL:0000133!1.20e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23;CL:0002319,1.35e-08,43;CL:0000221,4.53e-08,44;CL:0000133,4.53e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.92e-24!63;UBERON:0001049!3.83e-23!52;UBERON:0005068!3.83e-23!52;UBERON:0006241!3.83e-23!52;UBERON:0007135!3.83e-23!52;UBERON:0000073!4.52e-22!75;UBERON:0001016!4.52e-22!75;UBERON:0004121!6.91e-22!102;UBERON:0000924!6.91e-22!102;UBERON:0006601!6.91e-22!102;UBERON:0000955!7.00e-22!50;UBERON:0006238!7.00e-22!50;UBERON:0002616!2.75e-21!49;UBERON:0003056!3.51e-21!49;UBERON:0001017!3.71e-21!73;UBERON:0005743!3.71e-21!73;UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0002020!1.74e-19!34;UBERON:0003080!8.75e-18!40;UBERON:0002780!3.77e-17!39;UBERON:0001890!3.77e-17!39;UBERON:0006240!3.77e-17!39;UBERON:0002791!1.88e-16!29;UBERON:0003528!1.88e-16!29;UBERON:0001893!1.88e-16!29;UBERON:0000956!3.92e-12!21;UBERON:0001869!3.92e-12!21;UBERON:0000203!3.92e-12!21;UBERON:0002619!3.35e-11!17;UBERON:0007811!2.22e-09!86;UBERON:0000153!5.86e-09!94;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.02e-26,54;UBERON:0004121,3.10e-26,95;UBERON:0000924,3.10e-26,95;UBERON:0006601,3.10e-26,95;UBERON:0002346,5.48e-26,64;UBERON:0003075,5.48e-26,64;UBERON:0007284,5.48e-26,64;UBERON:0001049,5.72e-25,52;UBERON:0005068,5.72e-25,52;UBERON:0006241,5.72e-25,52;UBERON:0007135,5.72e-25,52;UBERON:0001016,7.94e-24,75;UBERON:0003056,7.72e-23,49;UBERON:0001017,7.81e-23,73;UBERON:0010371,3.30e-22,73;UBERON:0000955,1.47e-21,47;UBERON:0006238,1.47e-21,47;UBERON:0002020,5.33e-21,34;UBERON:0002616,6.30e-21,46;UBERON:0003080,3.73e-19,40;UBERON:0002780,1.82e-18,39;UBERON:0001890,1.82e-18,39;UBERON:0006240,1.82e-18,39;UBERON:0003528,1.04e-17,29;UBERON:0002791,1.04e-17,29;UBERON:0001893,1.04e-17,29;UBERON:0000956,5.03e-13,21;UBERON:0001869,5.03e-13,21;UBERON:0000203,5.03e-13,21;UBERON:0002619,5.16e-12,17;UBERON:0010314,1.64e-11,92;UBERON:0002021,9.98e-09,10;UBERON:0000411,9.98e-09,10;UBERON:0001950,9.98e-09,10
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,38.8647835990389,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.63580021170738,0.917733760808408,1.56478268869608,3.92445281484804,16.4764637050854,11.665793944457,9.93903593540074,27.3129872293446,0,0,0,0.771778308107841,0.286533439938757,0,15.9830004079082,19.5726662330652,20.9164363157039,2.03306719241479,6.22506357277798,0,0.988866362566974,0,26.664409836138,90.6755200558869,5.49554945234932,7.96535036156975,3.57552434297349,116.831252621156,101.378660296791,18.4961106814581,12.6516021744072,27.5765635983006,140.948327679218,80.1876483174979,85.0980194239589,14.6393779380515,11.8019060247108,11.4600941522487,72.587579740359,87.7909671649421,90.6093609316484,114.610519749257,82.7179465442788,31.5015063444758,18.2500125932974,7.93501381121248,1.44932244350839,0,0,0,0,0,9.69066498909088,0,0,0.35333957451034,0.281686839553361,0,0,0,1.73192832808971,3.29367825117628,2.02209778005913,7.53613606145796,1.29468941823586,0.29688427812965,1.04091196059682,0,1.15307748628029,0.60289056221049,1.29347577849275,0.879666139307728,4.94389935468748,9.25435884287435,1.76922110389975,7.60304194752823,5.30019644304944,9.21262980956922,1.86391761218122,8.49064311333487,9.21565509979202,0.255457055208591,0.11981512450592,0,0.508280908292259,115.338792341713,516.518180582229,173.403005915753,371.462572250895,301.99995510712,92.6734678735638,184.792798634176,3.1570202793598,3.98102305952298,1.51633655060205,6.52369753248069,9.62891277924007,9.19608417733892,8.64298223065676,7.53524089178575,10.0013653752452,8.71173297936978,7.21503279109912,18.1092359517311,0.215567992932842,0.567318240503458,0.527853372491847,0.876782929710299,1.94633074457919,4.52727816478817,8.23128545631774,1.59227413454795,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.810688095458557,1.31579988682799,0.219550115291051,1.07365135008297,102.200915002166,13.0688857721691,0.330418782983798,0.264450566663544,0.639864751605702,1.16118335930219,1.03093969057675,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.432276099749388,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,1.4255592949172,1.35766741017338,1.19230893813542,1.64414996523069,3.09981310757165,7.53593893638599,3.70191491765402,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,1.43848068725405,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0,3.14080423283228,1.51593129416388,0.488894929326078,0.509235257325564,0.704070744865506,1.17254380209271,1.42826184531608,1.17080188714679,1.26108115284953,1.7717175171902,0.956728611944923,3.4411296090305,2.07221978239075,2.89298117163023,0,0,0,0.275936746304732,46.5596710964597,31.178308633526,1.3114795630134,3.02965112645248,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,71.0120109292194,7.09700426041343,4.27357448801413,1.95464351224291,7.4236555337641,0,0.728341908464944,1.51161778482376,0.754420319023592,0.590603785761546,1.22974059177571,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,4.76615448055303,2.88097750450096,1.81102157295856,1.07168517515796,3.54680467284547,2.85390108163313,4.27827453565514,14.6143175575008,0.938686832254841,0,3.30792597082443,4.61681508236144,3.39075296061402,1.44751019827574,1.19372344003136,1.64140899745061,1.1659233465194,58.5943954353211,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0,0,1.5298058699447,1.25956307091292,2.48759952847963,1.90934123603023,0.474503990371703,4.26970880966382,4.10420295122845,5.64538399239065,5.02233896616208,5.12484516262319,6.36431609085087,2.87931536182433,0.388844919875379,1.24267862617385,0,3.88743019714345,3.30916980914195,4.4723773319131,3.22899558694328,6.58928889414035,3.0512882047896,4.9477666240701,5.03324853243412,1.44950472495604,0.864090018773596,0,1.41907650703115,1.33524244314275,0.389762468933385,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0,0,0,21.0859256762147,1.10992976687032,0.807424709485281,0.503653849092235,4.25017106870819,2.064507229963,1.64836461840539,17.3638387054043,2.50786052017682,322.473302134345,314.402136534402,333.998084335168,322.912129623789,420.640667139174,507.624699045879,370.587352627261,442.215421566184,461.752114754904,505.334064269776,0.93408612825759,1.59609949360412,2.39027048055788,4.132814190161,4.40187641518763,6.98605332110054,4.4449345560323,4.12070114477788,7.06022261101994,6.57012750585873,5.32306529769503,3.77252682772152,5.43120743325318,5.69823856403337,5.6286759576501,8.09699275181225,4.1718357340148,4.43691207066522,4.945030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|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,38.8647835990389,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.63580021170738,0.917733760808408,1.56478268869608,3.92445281484804,16.4764637050854,11.665793944457,9.93903593540074,27.3129872293446,0,0,0,0.771778308107841,0.286533439938757,0,15.9830004079082,19.5726662330652,20.9164363157039,2.03306719241479,6.22506357277798,0,0.988866362566974,0,26.664409836138,90.6755200558869,5.49554945234932,7.96535036156975,3.57552434297349,116.831252621156,101.378660296791,18.4961106814581,12.6516021744072,27.5765635983006,140.948327679218,80.1876483174979,85.0980194239589,14.6393779380515,11.8019060247108,11.4600941522487,72.587579740359,87.7909671649421,90.6093609316484,114.610519749257,82.7179465442788,31.5015063444758,18.2500125932974,7.93501381121248,1.44932244350839,0,0,0,0,0,9.69066498909088,0,0,0.35333957451034,0.281686839553361,0,0,0,1.73192832808971,3.29367825117628,2.02209778005913,7.53613606145796,1.29468941823586,0.29688427812965,1.04091196059682,0,1.15307748628029,0.60289056221049,1.29347577849275,0.879666139307728,4.94389935468748,9.25435884287435,1.76922110389975,7.60304194752823,5.30019644304944,9.21262980956922,1.86391761218122,8.49064311333487,9.21565509979202,0.255457055208591,0.11981512450592,0,0.508280908292259,115.338792341713,516.518180582229,173.403005915753,371.462572250895,301.99995510712,92.6734678735638,184.792798634176,3.1570202793598,3.98102305952298,1.51633655060205,6.52369753248069,9.62891277924007,9.19608417733892,8.64298223065676,7.53524089178575,10.0013653752452,8.71173297936978,7.21503279109912,18.1092359517311,0.215567992932842,0.567318240503458,0.527853372491847,0.876782929710299,1.94633074457919,4.52727816478817,8.23128545631774,1.59227413454795,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.656669856316381,0.810688095458557,1.31579988682799,0.219550115291051,1.07365135008297,102.200915002166,13.0688857721691,0.330418782983798,0.264450566663544,0.639864751605702,1.16118335930219,1.03093969057675,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.432276099749388,0.398282546508734,0.758671603812327,0.799739588268102,1.1270773567308,1.4255592949172,1.35766741017338,1.19230893813542,1.64414996523069,3.09981310757165,7.53593893638599,3.70191491765402,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,1.43848068725405,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0,3.14080423283228,1.51593129416388,0.488894929326078,0.509235257325564,0.704070744865506,1.17254380209271,1.42826184531608,1.17080188714679,1.26108115284953,1.7717175171902,0.956728611944923,3.4411296090305,2.07221978239075,2.89298117163023,0,0,0,0.275936746304732,46.5596710964597,31.178308633526,1.3114795630134,3.02965112645248,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,0,0.292255857911312,0,71.0120109292194,7.09700426041343,4.27357448801413,1.95464351224291,7.4236555337641,0,0.728341908464944,1.51161778482376,0.754420319023592,0.590603785761546,1.22974059177571,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,3.16255825724996,1.03135543248187,4.76615448055303,2.88097750450096,1.81102157295856,1.07168517515796,3.54680467284547,2.85390108163313,4.27827453565514,14.6143175575008,0.938686832254841,0,3.30792597082443,4.61681508236144,3.39075296061402,1.44751019827574,1.19372344003136,1.64140899745061,1.1659233465194,58.5943954353211,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,0,0,1.5298058699447,1.25956307091292,2.48759952847963,1.90934123603023,0.474503990371703,4.26970880966382,4.10420295122845,5.64538399239065,5.02233896616208,5.12484516262319,6.36431609085087,2.87931536182433,0.388844919875379,1.24267862617385,0,3.88743019714345,3.30916980914195,4.4723773319131,3.22899558694328,6.58928889414035,3.0512882047896,4.9477666240701,5.03324853243412,1.44950472495604,0.864090018773596,0,1.41907650703115,1.33524244314275,0.389762468933385,0,0,0.240390899039938,0,0.201932899896295,0,0.100826185136841,0,0,0,21.0859256762147,1.10992976687032,0.807424709485281,0.503653849092235,4.25017106870819,2.064507229963,1.64836461840539,17.3638387054043,2.50786052017682,322.473302134345,314.402136534402,333.998084335168,322.912129623789,420.640667139174,507.624699045879,370.587352627261,442.215421566184,461.752114754904,505.334064269776,0.93408612825759,1.59609949360412,2.39027048055788,4.132814190161,4.40187641518763,6.98605332110054,4.4449345560323,4.12070114477788,7.06022261101994,6.57012750585873,5.32306529769503,3.77252682772152,5.43120743325318,5.69823856403337,5.6286759576501,8.09699275181225,4.1718357340148,4.43691207066522,4.945030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|short_description=p1@Ngef
|short_description=p1@Ngef
}}
}}

Latest revision as of 18:16, 1 October 2015

Short description:p1@Ngef
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ngef_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000027477, NM_019867, uc007bwx.2_5end
EntrezGene:Ngef
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ngef

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C826.66
Mouse Microglia, donor2.CNhs12634.11736-123E890.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1116.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5101.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3140.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F380.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D785.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E472.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E587.79
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I690.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6114.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F682.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.50
Mouse Schwann, donor1.CNhs12507.11728-123D918.25
Mouse Schwann, donor2.CNhs12573.11746-123F97.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A4115.34
corpus striatum, adult.CNhs10487.19-21D8516.52
corpus striatum, neonate N00.CNhs11226.630-43F1173.40
cortex, adult.CNhs10473.12-14D5371.46
cortex, neonate N30.CNhs11107.1392-42F2302.00
diencephalon, adult.CNhs10482.20-12F292.67
diencephalon, neonate N30.CNhs11201.1388-42B2184.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C610.00
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A218.11
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E8102.20
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.14
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C246.56
medulla oblongata, neonate N30.CNhs11200.1396-42A331.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I971.01
ovary, adult.CNhs10507.91-2I77.10
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C958.59
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I44.95
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B421.09
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D517.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1322.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2314.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3334.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7322.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4420.64
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5507.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6370.59
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7442.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8461.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9505.33
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.23e-1223
neuroblast (sensu Vertebrata)1.23e-1223
neural cell1.35e-0843
ectodermal cell4.53e-0844
neurectodermal cell4.53e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.02e-2654
ectoderm-derived structure3.10e-2695
ectoderm3.10e-2695
presumptive ectoderm3.10e-2695
neurectoderm5.48e-2664
neural plate5.48e-2664
presumptive neural plate5.48e-2664
neural tube5.72e-2552
neural rod5.72e-2552
future spinal cord5.72e-2552
neural keel5.72e-2552
nervous system7.94e-2475
pre-chordal neural plate7.72e-2349
central nervous system7.81e-2373
ecto-epithelium3.30e-2273
brain1.47e-2147
future brain1.47e-2147
gray matter5.33e-2134
regional part of brain6.30e-2146
anterior neural tube3.73e-1940
regional part of forebrain1.82e-1839
forebrain1.82e-1839
future forebrain1.82e-1839
brain grey matter1.04e-1729
regional part of telencephalon1.04e-1729
telencephalon1.04e-1729
cerebral cortex5.03e-1321
cerebral hemisphere5.03e-1321
pallium5.03e-1321
regional part of cerebral cortex5.16e-1217
structure with developmental contribution from neural crest1.64e-1192
occipital lobe9.98e-0910
visual cortex9.98e-0910
neocortex9.98e-0910
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