FFCP PHASE1:Mm9::chr18:82753642..82753664,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=17196|HGNC=|MCL_coexpression_id=42|UniProt=|association_with_transcript=-138bp_to_uc012bfn.1_5end|description=CAGE_peak_11_at_Mbp_5end|id=chr18:82753642..82753664,+|ontology_enrichment_celltype=CL:0000117!5.33e-08!23;CL:0000337!5.33e-08!23;CL:0002610!7.28e-08!3;CL:0002614!9.37e-08!3;CL:0000221!1.32e-07!44;CL:0000133!1.32e-07!44;CL:0002319!9.11e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,1.50e-13,3;CL:0002614,2.41e-13,3;CL:0000117,9.24e-11,23;CL:0000337,9.24e-11,23;CL:0002611,2.68e-09,2;CL:0000540,3.70e-07,33;CL:0000047,3.70e-07,33;CL:0000031,3.70e-07,33;CL:0000404,3.70e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.07e-27!75;UBERON:0001016!1.07e-27!75;UBERON:0001017!4.72e-25!73;UBERON:0005743!4.72e-25!73;UBERON:0001049!4.19e-24!52;UBERON:0005068!4.19e-24!52;UBERON:0006241!4.19e-24!52;UBERON:0007135!4.19e-24!52;UBERON:0004121!1.55e-23!102;UBERON:0000924!1.55e-23!102;UBERON:0006601!1.55e-23!102;UBERON:0000033!1.87e-23!63;UBERON:0000955!2.61e-23!50;UBERON:0006238!2.61e-23!50;UBERON:0002616!5.80e-22!49;UBERON:0002346!1.58e-18!71;UBERON:0003075!1.58e-18!71;UBERON:0007284!1.58e-18!71;UBERON:0002020!6.01e-18!34;UBERON:0002021!2.36e-15!10;UBERON:0000411!2.36e-15!10;UBERON:0001950!2.36e-15!10;UBERON:0007811!3.45e-15!86;UBERON:0003076!7.03e-14!12;UBERON:0003057!7.03e-14!12;UBERON:0002298!1.27e-13!6;UBERON:0000153!2.87e-13!94;UBERON:0002791!7.36e-13!29;UBERON:0003528!7.36e-13!29;UBERON:0001893!7.36e-13!29;UBERON:0003080!8.42e-13!40;UBERON:0003056!4.26e-12!49;UBERON:0002780!1.32e-11!39;UBERON:0001890!1.32e-11!39;UBERON:0006240!1.32e-11!39;UBERON:0002619!3.29e-10!17;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002950!1.54e-09!4;UBERON:0001891!1.54e-09!4;UBERON:0009616!1.54e-09!4;UBERON:0002240!4.08e-09!6;UBERON:0005174!4.08e-09!6;UBERON:0001137!4.08e-09!6;UBERON:0004111!7.19e-08!122;UBERON:0004684!7.28e-08!3;UBERON:0002275!7.28e-08!3;UBERON:0002038!9.37e-08!3;UBERON:0002308!9.37e-08!3;UBERON:0009663!9.37e-08!3;UBERON:0009661!9.37e-08!3;UBERON:0006331!9.37e-08!3;UBERON:0000125!9.37e-08!3;UBERON:0000025!2.43e-07!114;UBERON:0001948!3.96e-07!5;UBERON:0002315!3.96e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-27,54;UBERON:0001016,3.07e-23,75;UBERON:0001049,2.37e-22,52;UBERON:0005068,2.37e-22,52;UBERON:0006241,2.37e-22,52;UBERON:0007135,2.37e-22,52;UBERON:0001017,1.29e-21,73;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002346,1.34e-17,64;UBERON:0003075,1.34e-17,64;UBERON:0007284,1.34e-17,64;UBERON:0002616,3.97e-17,46;UBERON:0002950,9.86e-17,4;UBERON:0001891,9.86e-17,4;UBERON:0009616,9.86e-17,4;UBERON:0010286,9.86e-17,4;UBERON:0000955,1.04e-16,47;UBERON:0006238,1.04e-16,47;UBERON:0003076,1.87e-16,12;UBERON:0003057,1.87e-16,12;UBERON:0010371,4.68e-15,73;UBERON:0004684,1.50e-13,3;UBERON:0002275,1.50e-13,3;UBERON:0002038,2.41e-13,3;UBERON:0009663,2.41e-13,3;UBERON:0009661,2.41e-13,3;UBERON:0000125,2.41e-13,3;UBERON:0002308,2.41e-13,3;UBERON:0004733,2.00e-11,6;UBERON:0004732,2.00e-11,6;UBERON:0002028,2.00e-11,6;UBERON:0007277,2.00e-11,6;UBERON:0010314,2.60e-11,92;UBERON:0002020,2.42e-10,34;UBERON:0003080,3.27e-10,40;UBERON:0002021,1.31e-09,10;UBERON:0000411,1.31e-09,10;UBERON:0001950,1.31e-09,10;UBERON:0001896,2.02e-09,2;UBERON:0002298,2.02e-09,2;UBERON:0005290,2.02e-09,2;UBERON:0010096,2.02e-09,2;UBERON:0002256,2.68e-09,2;UBERON:0002780,1.13e-08,39;UBERON:0001890,1.13e-08,39;UBERON:0006240,1.13e-08,39;UBERON:0000025,1.60e-08,114;UBERON:0003056,5.25e-08,49;UBERON:0003528,7.91e-08,29;UBERON:0002791,7.91e-08,29;UBERON:0001893,7.91e-08,29;UBERON:0004111,9.37e-08,122;UBERON:0011216,6.78e-07,194;UBERON:0002240,7.12e-07,6;UBERON:0005174,7.12e-07,6;UBERON:0001137,7.12e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,3.42781181284564,3.97563373712904,0,0,0,7.70811166995721,4.08599481872601,4.14737639791857,0,0,0,11.725685958058,1.68828783009504,4.88954392885792,0.883885756421003,0.711858403995515,0,1.51452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,34.977600037847,0,0,0,0,1.3481157546434,0.457500602818626,0,0.869121600961382,0.767146371990992,1.24672826735736,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,5.97779601620236,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.86447756719698,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843|short_description=p11@Mbp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17196 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-138bp_to_uc012bfn.1_5end | |||
|cluster_id=chr18:82753642..82753664,+ | |||
|description=CAGE_peak_11_at_Mbp_5end | |||
|id=chr18:82753642..82753664,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.33e-08!23;CL:0000337!5.33e-08!23;CL:0002610!7.28e-08!3;CL:0002614!9.37e-08!3;CL:0000221!1.32e-07!44;CL:0000133!1.32e-07!44;CL:0002319!9.11e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.50e-13,3;CL:0002614,2.41e-13,3;CL:0000117,9.24e-11,23;CL:0000337,9.24e-11,23;CL:0002611,2.68e-09,2;CL:0000540,3.70e-07,33;CL:0000047,3.70e-07,33;CL:0000031,3.70e-07,33;CL:0000404,3.70e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-27!75;UBERON:0001016!1.07e-27!75;UBERON:0001017!4.72e-25!73;UBERON:0005743!4.72e-25!73;UBERON:0001049!4.19e-24!52;UBERON:0005068!4.19e-24!52;UBERON:0006241!4.19e-24!52;UBERON:0007135!4.19e-24!52;UBERON:0004121!1.55e-23!102;UBERON:0000924!1.55e-23!102;UBERON:0006601!1.55e-23!102;UBERON:0000033!1.87e-23!63;UBERON:0000955!2.61e-23!50;UBERON:0006238!2.61e-23!50;UBERON:0002616!5.80e-22!49;UBERON:0002346!1.58e-18!71;UBERON:0003075!1.58e-18!71;UBERON:0007284!1.58e-18!71;UBERON:0002020!6.01e-18!34;UBERON:0002021!2.36e-15!10;UBERON:0000411!2.36e-15!10;UBERON:0001950!2.36e-15!10;UBERON:0007811!3.45e-15!86;UBERON:0003076!7.03e-14!12;UBERON:0003057!7.03e-14!12;UBERON:0002298!1.27e-13!6;UBERON:0000153!2.87e-13!94;UBERON:0002791!7.36e-13!29;UBERON:0003528!7.36e-13!29;UBERON:0001893!7.36e-13!29;UBERON:0003080!8.42e-13!40;UBERON:0003056!4.26e-12!49;UBERON:0002780!1.32e-11!39;UBERON:0001890!1.32e-11!39;UBERON:0006240!1.32e-11!39;UBERON:0002619!3.29e-10!17;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002950!1.54e-09!4;UBERON:0001891!1.54e-09!4;UBERON:0009616!1.54e-09!4;UBERON:0002240!4.08e-09!6;UBERON:0005174!4.08e-09!6;UBERON:0001137!4.08e-09!6;UBERON:0004111!7.19e-08!122;UBERON:0004684!7.28e-08!3;UBERON:0002275!7.28e-08!3;UBERON:0002038!9.37e-08!3;UBERON:0002308!9.37e-08!3;UBERON:0009663!9.37e-08!3;UBERON:0009661!9.37e-08!3;UBERON:0006331!9.37e-08!3;UBERON:0000125!9.37e-08!3;UBERON:0000025!2.43e-07!114;UBERON:0001948!3.96e-07!5;UBERON:0002315!3.96e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-27,54;UBERON:0001016,3.07e-23,75;UBERON:0001049,2.37e-22,52;UBERON:0005068,2.37e-22,52;UBERON:0006241,2.37e-22,52;UBERON:0007135,2.37e-22,52;UBERON:0001017,1.29e-21,73;UBERON:0004121,1.15e-17,95;UBERON:0000924,1.15e-17,95;UBERON:0006601,1.15e-17,95;UBERON:0002346,1.34e-17,64;UBERON:0003075,1.34e-17,64;UBERON:0007284,1.34e-17,64;UBERON:0002616,3.97e-17,46;UBERON:0002950,9.86e-17,4;UBERON:0001891,9.86e-17,4;UBERON:0009616,9.86e-17,4;UBERON:0010286,9.86e-17,4;UBERON:0000955,1.04e-16,47;UBERON:0006238,1.04e-16,47;UBERON:0003076,1.87e-16,12;UBERON:0003057,1.87e-16,12;UBERON:0010371,4.68e-15,73;UBERON:0004684,1.50e-13,3;UBERON:0002275,1.50e-13,3;UBERON:0002038,2.41e-13,3;UBERON:0009663,2.41e-13,3;UBERON:0009661,2.41e-13,3;UBERON:0000125,2.41e-13,3;UBERON:0002308,2.41e-13,3;UBERON:0004733,2.00e-11,6;UBERON:0004732,2.00e-11,6;UBERON:0002028,2.00e-11,6;UBERON:0007277,2.00e-11,6;UBERON:0010314,2.60e-11,92;UBERON:0002020,2.42e-10,34;UBERON:0003080,3.27e-10,40;UBERON:0002021,1.31e-09,10;UBERON:0000411,1.31e-09,10;UBERON:0001950,1.31e-09,10;UBERON:0001896,2.02e-09,2;UBERON:0002298,2.02e-09,2;UBERON:0005290,2.02e-09,2;UBERON:0010096,2.02e-09,2;UBERON:0002256,2.68e-09,2;UBERON:0002780,1.13e-08,39;UBERON:0001890,1.13e-08,39;UBERON:0006240,1.13e-08,39;UBERON:0000025,1.60e-08,114;UBERON:0003056,5.25e-08,49;UBERON:0003528,7.91e-08,29;UBERON:0002791,7.91e-08,29;UBERON:0001893,7.91e-08,29;UBERON:0004111,9.37e-08,122;UBERON:0011216,6.78e-07,194;UBERON:0002240,7.12e-07,6;UBERON:0005174,7.12e-07,6;UBERON:0001137,7.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,3.42781181284564,3.97563373712904,0,0,0,7.70811166995721,4.08599481872601,4.14737639791857,0,0,0,11.725685958058,1.68828783009504,4.88954392885792,0.883885756421003,0.711858403995515,0,1.51452386666368,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,34.977600037847,0,0,0,0,1.3481157546434,0.457500602818626,0,0.869121600961382,0.767146371990992,1.24672826735736,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,5.97779601620236,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,2.86447756719698,0.859265911718438,2.05524755931193,1.5107877947794,1.35004500046361,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |||
|short_description=p11@Mbp | |||
}} |
Latest revision as of 19:02, 1 October 2015
Short description: | p11@Mbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Mbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -138bp_to_uc012bfn.1_5end |
EntrezGene: | Mbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.50e-13 | 3 |
neuron of the substantia nigra | 2.41e-13 | 3 |
CNS neuron (sensu Vertebrata) | 9.24e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.24e-11 | 23 |
neuron of the dorsal spinal cord | 2.68e-09 | 2 |
neuron | 3.70e-07 | 33 |
neuronal stem cell | 3.70e-07 | 33 |
neuroblast | 3.70e-07 | 33 |
electrically signaling cell | 3.70e-07 | 33 |