Personal tools

FFCP PHASE1:Mm9::chr18:86564576..86564625,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=246317
|EntrezGene=246317
|HGNC=
|HGNC=
|MCL_coexpression_id=288
|MCL_coexpression_id=288
|TSSclassifier=NA
|UniProt=Q8R4I7
|UniProt=Q8R4I7
|association_with_transcript=232bp_to_ENSMUST00000058829,NM_144946,uc008fuz.2_5end
|association_with_transcript=232bp_to_ENSMUST00000058829,NM_144946,uc008fuz.2_5end
|cluster_id=chr18:86564576..86564625,+
|description=CAGE_peak_3_at_Neto1_5end
|description=CAGE_peak_3_at_Neto1_5end
|id=chr18:86564576..86564625,+
|id=chr18:86564576..86564625,+
|ontology_enrichment_celltype=CL:0000540!1.76e-15!33;CL:0000047!1.76e-15!33;CL:0000031!1.76e-15!33;CL:0000404!1.76e-15!33;CL:0000117!9.79e-12!23;CL:0000337!9.79e-12!23;CL:0000393!4.61e-11!39;CL:0000211!4.61e-11!39;CL:0000221!3.26e-10!44;CL:0000133!3.26e-10!44;CL:0002319!3.30e-10!43;CL:0000055!4.23e-07!50
|ontology_enrichment_celltype=CL:0000540!1.76e-15!33;CL:0000047!1.76e-15!33;CL:0000031!1.76e-15!33;CL:0000404!1.76e-15!33;CL:0000117!9.79e-12!23;CL:0000337!9.79e-12!23;CL:0000393!4.61e-11!39;CL:0000211!4.61e-11!39;CL:0000221!3.26e-10!44;CL:0000133!3.26e-10!44;CL:0002319!3.30e-10!43;CL:0000055!4.23e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.30e-16,33;CL:0000047,6.30e-16,33;CL:0000031,6.30e-16,33;CL:0000404,6.30e-16,33;CL:0000117,3.27e-13,23;CL:0000337,3.27e-13,23;CL:0000393,2.42e-12,39;CL:0000211,2.42e-12,39;CL:0002319,1.56e-10,43;CL:0000221,3.89e-10,44;CL:0000133,3.89e-10,44;CL:0002609,5.80e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.63e-24!73;UBERON:0005743!1.63e-24!73;UBERON:0000073!5.75e-24!75;UBERON:0001016!5.75e-24!75;UBERON:0002020!1.77e-20!34;UBERON:0002346!2.48e-20!71;UBERON:0003075!2.48e-20!71;UBERON:0007284!2.48e-20!71;UBERON:0004121!7.85e-20!102;UBERON:0000924!7.85e-20!102;UBERON:0006601!7.85e-20!102;UBERON:0001049!1.65e-19!52;UBERON:0005068!1.65e-19!52;UBERON:0006241!1.65e-19!52;UBERON:0007135!1.65e-19!52;UBERON:0003056!2.36e-17!49;UBERON:0000955!6.43e-17!50;UBERON:0006238!6.43e-17!50;UBERON:0002791!7.21e-17!29;UBERON:0003528!7.21e-17!29;UBERON:0001893!7.21e-17!29;UBERON:0003080!7.80e-17!40;UBERON:0000033!1.59e-16!63;UBERON:0002780!1.91e-16!39;UBERON:0001890!1.91e-16!39;UBERON:0006240!1.91e-16!39;UBERON:0002616!3.80e-16!49;UBERON:0000956!1.09e-12!21;UBERON:0001869!1.09e-12!21;UBERON:0000203!1.09e-12!21;UBERON:0002619!1.84e-10!17;UBERON:0002021!2.99e-09!10;UBERON:0000411!2.99e-09!10;UBERON:0001950!2.99e-09!10;UBERON:0007811!1.42e-07!86
|ontology_enrichment_uberon=UBERON:0001017!1.63e-24!73;UBERON:0005743!1.63e-24!73;UBERON:0000073!5.75e-24!75;UBERON:0001016!5.75e-24!75;UBERON:0002020!1.77e-20!34;UBERON:0002346!2.48e-20!71;UBERON:0003075!2.48e-20!71;UBERON:0007284!2.48e-20!71;UBERON:0004121!7.85e-20!102;UBERON:0000924!7.85e-20!102;UBERON:0006601!7.85e-20!102;UBERON:0001049!1.65e-19!52;UBERON:0005068!1.65e-19!52;UBERON:0006241!1.65e-19!52;UBERON:0007135!1.65e-19!52;UBERON:0003056!2.36e-17!49;UBERON:0000955!6.43e-17!50;UBERON:0006238!6.43e-17!50;UBERON:0002791!7.21e-17!29;UBERON:0003528!7.21e-17!29;UBERON:0001893!7.21e-17!29;UBERON:0003080!7.80e-17!40;UBERON:0000033!1.59e-16!63;UBERON:0002780!1.91e-16!39;UBERON:0001890!1.91e-16!39;UBERON:0006240!1.91e-16!39;UBERON:0002616!3.80e-16!49;UBERON:0000956!1.09e-12!21;UBERON:0001869!1.09e-12!21;UBERON:0000203!1.09e-12!21;UBERON:0002619!1.84e-10!17;UBERON:0002021!2.99e-09!10;UBERON:0000411!2.99e-09!10;UBERON:0001950!2.99e-09!10;UBERON:0007811!1.42e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.32e-30,34;UBERON:0001017,1.31e-27,73;UBERON:0001016,1.77e-26,75;UBERON:0000073,4.54e-25,54;UBERON:0001049,1.54e-24,52;UBERON:0005068,1.54e-24,52;UBERON:0006241,1.54e-24,52;UBERON:0007135,1.54e-24,52;UBERON:0003528,2.94e-24,29;UBERON:0002791,2.94e-24,29;UBERON:0001893,2.94e-24,29;UBERON:0002346,7.79e-23,64;UBERON:0003075,7.79e-23,64;UBERON:0007284,7.79e-23,64;UBERON:0000956,2.44e-20,21;UBERON:0001869,2.44e-20,21;UBERON:0000203,2.44e-20,21;UBERON:0003080,6.70e-20,40;UBERON:0000955,8.27e-20,47;UBERON:0006238,8.27e-20,47;UBERON:0002780,2.69e-19,39;UBERON:0001890,2.69e-19,39;UBERON:0006240,2.69e-19,39;UBERON:0004121,6.14e-19,95;UBERON:0000924,6.14e-19,95;UBERON:0006601,6.14e-19,95;UBERON:0002616,1.12e-18,46;UBERON:0010371,1.88e-18,73;UBERON:0002619,9.26e-17,17;UBERON:0003056,8.36e-16,49;UBERON:0002021,6.96e-14,10;UBERON:0000411,6.96e-14,10;UBERON:0001950,6.96e-14,10;UBERON:0010314,3.99e-12,92;UBERON:0002240,1.43e-07,6;UBERON:0005174,1.43e-07,6;UBERON:0001137,1.43e-07,6;UBERON:0001948,6.56e-07,5;UBERON:0002315,6.56e-07,5
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,2.7996195323289,1.35005938331691,2.10324961351382,3.42781181284564,6.18431914664518,6.85948475603743,7.95517409451362,3.67687514644008,0,4.72443150915195,3.22573719838111,1.45074916503213,1.37231465403614,0.52091337055676,0.279182999001381,5.6276261003168,6.57032465440283,11.490514833473,8.39992916714707,4.47358669980721,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,1.19832511523858,49.4100651044117,66.5968066198181,15.9918374576894,20.4572365864264,5.61027720310812,19.7934340942664,0.81471491080253,0,0,0,0,0.919608417733892,0.360124259610698,0.90422890701429,0.544291993210623,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,27.3376933133365,9.15851050175631,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,1.28440471990234,2.34423373184406,0,0,2.2085575359138,1.17131623288992,3.23135096599198,2.86762557543062,0.891194696329576,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,20.5645642509957,0.283880170416537,0,0.81443479676788,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.66882771809459,0.170870880797853,0.206386867963223,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0253218620656,16.1113832777512,22.9158205375759,13.4045482228076,13.0165678756422,9.06472676867641,12.1504050041725,14.4102785031751,18.5788387683524,19.1571315348173,0,0.399024873401031,0.512200817262403,1.45864030240976,0.838452650511929,3.49302666055027,1.77797382241292,2.47242068686673,3.53011130550997,2.02157769411038,3.04175159868288,1.32038438970253,2.34103768674706,1.6646539625266,1.66562859971278,2.85776214769844,2.20180219295225,1.35036454324594,0.412085900803307,0.883193520806384,1.37147700954166,1.95223386775271,1.66905332963125,1.45346416632329,1.31753132581463,1.01537529470012,1.28049581010941,1.31534855718921,2.17286582153379,1.68342681497322,1.89816028998679,1.0835493061312,0.818462086339379,0.929621047115796,1.92906610981141,3.2475375131933,2.8071793013449,2.14871054048298,0.57386499620653,0.441182838239031,0
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,2.7996195323289,1.35005938331691,2.10324961351382,3.42781181284564,6.18431914664518,6.85948475603743,7.95517409451362,3.67687514644008,0,4.72443150915195,3.22573719838111,1.45074916503213,1.37231465403614,0.52091337055676,0.279182999001381,5.6276261003168,6.57032465440283,11.490514833473,8.39992916714707,4.47358669980721,0,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,1.19832511523858,49.4100651044117,66.5968066198181,15.9918374576894,20.4572365864264,5.61027720310812,19.7934340942664,0.81471491080253,0,0,0,0,0.919608417733892,0.360124259610698,0.90422890701429,0.544291993210623,0.2562274405697,0.374806898238915,2.32833033665114,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,27.3376933133365,9.15851050175631,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0.312037673114561,0,0,0,0,0.757965647081939,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,1.28440471990234,2.34423373184406,0,0,2.2085575359138,1.17131623288992,3.23135096599198,2.86762557543062,0.891194696329576,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,20.5645642509957,0.283880170416537,0,0.81443479676788,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,1.66882771809459,0.170870880797853,0.206386867963223,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.469428954583016,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.0253218620656,16.1113832777512,22.9158205375759,13.4045482228076,13.0165678756422,9.06472676867641,12.1504050041725,14.4102785031751,18.5788387683524,19.1571315348173,0,0.399024873401031,0.512200817262403,1.45864030240976,0.838452650511929,3.49302666055027,1.77797382241292,2.47242068686673,3.53011130550997,2.02157769411038,3.04175159868288,1.32038438970253,2.34103768674706,1.6646539625266,1.66562859971278,2.85776214769844,2.20180219295225,1.35036454324594,0.412085900803307,0.883193520806384,1.37147700954166,1.95223386775271,1.66905332963125,1.45346416632329,1.31753132581463,1.01537529470012,1.28049581010941,1.31534855718921,2.17286582153379,1.68342681497322,1.89816028998679,1.0835493061312,0.818462086339379,0.929621047115796,1.92906610981141,3.2475375131933,2.8071793013449,2.14871054048298,0.57386499620653,0.441182838239031,0
|short_description=p3@Neto1
|short_description=p3@Neto1
}}
}}

Latest revision as of 19:39, 1 October 2015

Short description:p3@Neto1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Neto1_5end
Coexpression cluster:MCL_coexpression_mm9:288
Association with transcript: 232bp_to_ENSMUST00000058829, NM_144946, uc008fuz.2_5end
EntrezGene:Neto1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Neto1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F166.60
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B219.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E827.34
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter5.32e-3034
central nervous system1.31e-2773
nervous system1.77e-2675
regional part of nervous system4.54e-2554
neural tube1.54e-2452
neural rod1.54e-2452
future spinal cord1.54e-2452
neural keel1.54e-2452
brain grey matter2.94e-2429
regional part of telencephalon2.94e-2429
telencephalon2.94e-2429
neurectoderm7.79e-2364
neural plate7.79e-2364
presumptive neural plate7.79e-2364
cerebral cortex2.44e-2021
cerebral hemisphere2.44e-2021
pallium2.44e-2021
anterior neural tube6.70e-2040
brain8.27e-2047
future brain8.27e-2047
regional part of forebrain2.69e-1939
forebrain2.69e-1939
future forebrain2.69e-1939
ectoderm-derived structure6.14e-1995
ectoderm6.14e-1995
presumptive ectoderm6.14e-1995
regional part of brain1.12e-1846
ecto-epithelium1.88e-1873
regional part of cerebral cortex9.26e-1717
pre-chordal neural plate8.36e-1649
occipital lobe6.96e-1410
visual cortex6.96e-1410
neocortex6.96e-1410
structure with developmental contribution from neural crest3.99e-1292
spinal cord1.43e-076
dorsal region element1.43e-076
dorsum1.43e-076
regional part of spinal cord6.56e-075
gray matter of spinal cord6.56e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:86564576..86564625,%2B&oldid=4318796"