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FFCP PHASE1:Mm9::chr5:122298984..122298991,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=231717
|EntrezGene=231717
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BH49
|UniProt=Q8BH49
|association_with_transcript=-45bp_to_ENSMUST00000056654,NM_175474,uc008zkj.1,uc008zkk.1_5end
|association_with_transcript=-45bp_to_ENSMUST00000056654,NM_175474,uc008zkj.1,uc008zkk.1_5end
|cluster_id=chr5:122298984..122298991,+
|description=CAGE_peak_4_at_Fam109a_5end
|description=CAGE_peak_4_at_Fam109a_5end
|id=chr5:122298984..122298991,+
|id=chr5:122298984..122298991,+
|ontology_enrichment_celltype=CL:0000117!2.28e-09!23;CL:0000337!2.28e-09!23;CL:0000221!3.83e-08!44;CL:0000133!3.83e-08!44;CL:0002319!7.62e-08!43;CL:0000540!4.86e-07!33;CL:0000047!4.86e-07!33;CL:0000031!4.86e-07!33;CL:0000404!4.86e-07!33
|ontology_enrichment_celltype=CL:0000117!2.28e-09!23;CL:0000337!2.28e-09!23;CL:0000221!3.83e-08!44;CL:0000133!3.83e-08!44;CL:0002319!7.62e-08!43;CL:0000540!4.86e-07!33;CL:0000047!4.86e-07!33;CL:0000031!4.86e-07!33;CL:0000404!4.86e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-22,23;CL:0000337,1.06e-22,23;CL:0002609,2.23e-18,6;CL:0000540,6.91e-15,33;CL:0000047,6.91e-15,33;CL:0000031,6.91e-15,33;CL:0000404,6.91e-15,33;CL:0002319,1.76e-12,43;CL:0000393,3.99e-12,39;CL:0000211,3.99e-12,39;CL:0000221,4.02e-12,44;CL:0000133,4.02e-12,44;CL:0000120,3.15e-10,3;CL:0002608,4.75e-10,3;CL:0002613,6.14e-09,3;CL:0002321,1.81e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.23e-08!52;UBERON:0005068!3.23e-08!52;UBERON:0006241!3.23e-08!52;UBERON:0007135!3.23e-08!52;UBERON:0001017!1.05e-07!73;UBERON:0005743!1.05e-07!73;UBERON:0000073!2.49e-07!75;UBERON:0001016!2.49e-07!75;UBERON:0000033!6.52e-07!63;UBERON:0002780!9.79e-07!39;UBERON:0001890!9.79e-07!39;UBERON:0006240!9.79e-07!39
|ontology_enrichment_uberon=UBERON:0001049!3.23e-08!52;UBERON:0005068!3.23e-08!52;UBERON:0006241!3.23e-08!52;UBERON:0007135!3.23e-08!52;UBERON:0001017!1.05e-07!73;UBERON:0005743!1.05e-07!73;UBERON:0000073!2.49e-07!75;UBERON:0001016!2.49e-07!75;UBERON:0000033!6.52e-07!63;UBERON:0002780!9.79e-07!39;UBERON:0001890!9.79e-07!39;UBERON:0006240!9.79e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.06e-12,29;UBERON:0002791,4.06e-12,29;UBERON:0001893,4.06e-12,29;UBERON:0002020,8.88e-12,34;UBERON:0001017,2.15e-10,73;UBERON:0001016,5.25e-10,75;UBERON:0002780,6.02e-10,39;UBERON:0001890,6.02e-10,39;UBERON:0006240,6.02e-10,39;UBERON:0003080,1.25e-09,40;UBERON:0002616,2.27e-09,46;UBERON:0001049,2.91e-09,52;UBERON:0005068,2.91e-09,52;UBERON:0006241,2.91e-09,52;UBERON:0007135,2.91e-09,52;UBERON:0000955,4.15e-09,47;UBERON:0006238,4.15e-09,47;UBERON:0000369,7.64e-09,5;UBERON:0002435,7.64e-09,5;UBERON:0000204,7.64e-09,5;UBERON:0010082,7.64e-09,5;UBERON:0000073,8.38e-09,54;UBERON:0002420,3.13e-08,8;UBERON:0007245,3.13e-08,8;UBERON:0010009,3.13e-08,8;UBERON:0010011,3.13e-08,8;UBERON:0000454,3.13e-08,8;UBERON:0003056,2.25e-07,49;UBERON:0004121,4.84e-07,95;UBERON:0000924,4.84e-07,95;UBERON:0006601,4.84e-07,95;UBERON:0002346,6.06e-07,64;UBERON:0003075,6.06e-07,64;UBERON:0007284,6.06e-07,64
|phase1_expression=0.320297694209588,0,0.454999239389536,0.60492842261366,0,0,0.467225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0,0.239316476986009,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0.971020706062307,0,0.608261587317087,0.183546752161682,0.782391344348039,0.872100625521786,0.659058548203415,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,1.82084814773638,2.64495489636016,1.90149421051854,0,0,1.3498495759221,0,0,0,0.384218305321555,1.34796496001021,2.16009501330705,2.10324961351382,1.14260393761521,0.441737081903227,1.71487118900936,2.1086003624012,1.83843757322004,0,0.383062014255563,0.153606533256243,1.18697658957174,1.73826522844578,1.04182674111352,1.11673199600552,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.559198337475902,0.302904773332736,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0.340860645156116,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0,0,0.301445281105245,0,0.376999773989026,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0,0.239630249011841,1.79970819298022,0.127070227073065,0.149790639404823,0,1.00523481690292,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.916554274652847,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,1.29340795759705,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,1.1270773567308,0,0.193952487167626,0.561086559122548,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.502518772325447,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.468846746368813,0,0,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.141940085208269,0,0.488660878060728,0,0,0,0.906970670894253,0.188605079755898,1.18120757152309,0,0,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0.493647061806363,1.2178597964584,0,0.63549621259146,0.220528398054962,0.65954501176592,0,0.301564624640779,0,0,0.291480836629851,0.18542530201051,0.170870880797853,1.03193433981611,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.419854356970974,0.414599921413271,0,0.949007980743406,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,1.44015003128933,0,0.608175645870493,0.410843828659309,0.25984164595559,0,0,0,0,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0,0.350630706544707,0.453460767230423,1.10992976687032,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0,0.859265911718438,0,0,0,1.35096360967266,0,0.51776031175182,0.31136204275253,0.798049746802062,0.853668028770671,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.282328141245992,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0,0,0.464810523557898,0.385813221962283,0.249810577937946,0,0.859484216193193,0.57386499620653,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0,0.454999239389536,0.60492842261366,0,0,0.467225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0,0.239316476986009,0.171200729931206,0.34968160967599,0,0,0,0.157731082679119,0,0,0.425216450755349,0,0,0,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0.523523743973798,0,0,0.971020706062307,0,0.608261587317087,0.183546752161682,0.782391344348039,0.872100625521786,0.659058548203415,0.58328969722285,0.279972843250725,1.43752564364972,0,0,0.336093799142464,0.257259436035947,0.573066879877513,0,1.82084814773638,2.64495489636016,1.90149421051854,0,0,1.3498495759221,0,0,0,0.384218305321555,1.34796496001021,2.16009501330705,2.10324961351382,1.14260393761521,0.441737081903227,1.71487118900936,2.1086003624012,1.83843757322004,0,0.383062014255563,0.153606533256243,1.18697658957174,1.73826522844578,1.04182674111352,1.11673199600552,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.559198337475902,0.302904773332736,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0.340860645156116,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0,0,0.301445281105245,0,0.376999773989026,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0.292780797011547,1.04723353406728,0,0.239630249011841,1.79970819298022,0.127070227073065,0.149790639404823,0,1.00523481690292,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.916554274652847,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0.30140963567143,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,1.29340795759705,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.92614151141356,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,1.1270773567308,0,0.193952487167626,0.561086559122548,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.502518772325447,0,0.390267295715598,0.472905432318573,0.221464689648775,0.318909537314974,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0,0.468846746368813,0,0,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0,0.404810701674894,0.292255857911312,0.790575555893047,0,0.141940085208269,0,0.488660878060728,0,0,0,0.906970670894253,0.188605079755898,1.18120757152309,0,0,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0.493647061806363,1.2178597964584,0,0.63549621259146,0.220528398054962,0.65954501176592,0,0.301564624640779,0,0,0.291480836629851,0.18542530201051,0.170870880797853,1.03193433981611,0,0.188368457004691,0.136694227721025,0,0.339956859987711,0.419854356970974,0.414599921413271,0,0.949007980743406,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,1.12738587736838,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,1.44015003128933,0,0.608175645870493,0.410843828659309,0.25984164595559,0,0,0,0,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0,0.350630706544707,0.453460767230423,1.10992976687032,0.269141569828427,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0.920650473014354,0,0.859265911718438,0,0,0,1.35096360967266,0,0.51776031175182,0.31136204275253,0.798049746802062,0.853668028770671,0.486213434136588,0.628839487883947,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.581385666529314,0.282328141245992,0.507687647350059,0.365855945745545,0,0.135804113845862,0,0.474540072496697,0,0,0.464810523557898,0.385813221962283,0.249810577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|short_description=p4@Fam109a
|short_description=p4@Fam109a
}}
}}

Latest revision as of 19:41, 1 October 2015

Short description:p4@Fam109a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Fam109a_5end
Coexpression cluster:NA
Association with transcript: -45bp_to_ENSMUST00000056654, NM_175474, uc008zkj.1, uc008zkk.1_5end
EntrezGene:Fam109a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Fam109a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter4.06e-1229
regional part of telencephalon4.06e-1229
telencephalon4.06e-1229
gray matter8.88e-1234
central nervous system2.15e-1073
nervous system5.25e-1075
regional part of forebrain6.02e-1039
forebrain6.02e-1039
future forebrain6.02e-1039
anterior neural tube1.25e-0940
regional part of brain2.27e-0946
neural tube2.91e-0952
neural rod2.91e-0952
future spinal cord2.91e-0952
neural keel2.91e-0952
brain4.15e-0947
future brain4.15e-0947
corpus striatum7.64e-095
striatum7.64e-095
ventral part of telencephalon7.64e-095
future corpus striatum7.64e-095
regional part of nervous system8.38e-0954
basal ganglion3.13e-088
nuclear complex of neuraxis3.13e-088
aggregate regional part of brain3.13e-088
collection of basal ganglia3.13e-088
cerebral subcortex3.13e-088
pre-chordal neural plate2.25e-0749
ectoderm-derived structure4.84e-0795
ectoderm4.84e-0795
presumptive ectoderm4.84e-0795
neurectoderm6.06e-0764
neural plate6.06e-0764
presumptive neural plate6.06e-0764
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