FFCP PHASE1:Mm9::chrX:70737460..70737474,+: Difference between revisions
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{{FFCP|EntrezGene=12111|HGNC=|MCL_coexpression_id=188|UniProt=|association_with_transcript=64bp_to_ENSMUST00000155231_5end|description=CAGE_peak_5_at_Bgn_5end|id=chrX:70737460..70737474,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,3.29e-18,6;CL:0000187,3.29e-18,6;CL:0000056,3.29e-18,6;CL:0000222,1.63e-15,7;CL:0000355,6.42e-12,9;CL:0002494,1.43e-10,3;CL:0000737,1.43e-10,3;CL:0000746,1.43e-10,3;CL:0000513,1.43e-10,3;CL:0000151,7.58e-10,3;CL:0000499,7.58e-10,3;CL:0000327,7.58e-10,3;CL:0000192,2.70e-09,3;CL:0000359,2.70e-09,3;CL:0002539,2.70e-09,3;CL:0000514,2.70e-09,3;CL:0000708,4.31e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.42e-12,9;UBERON:0002036,6.42e-12,9;UBERON:0002385,6.42e-12,9;UBERON:0000486,6.42e-12,9;UBERON:0007503,6.42e-12,9;UBERON:0001015,6.42e-12,9;UBERON:0002329,6.42e-12,9;UBERON:0003082,6.42e-12,9;UBERON:0003059,6.42e-12,9;UBERON:0007282,6.42e-12,9;UBERON:0004290,6.42e-12,9;UBERON:0009618,6.42e-12,9;UBERON:0000383,1.17e-10,10;UBERON:0007524,1.26e-09,11;UBERON:0003077,1.26e-09,11;UBERON:0007285,1.26e-09,11;UBERON:0001135,2.70e-09,3;UBERON:0004237,2.70e-09,3;UBERON:0004695,2.70e-09,3;UBERON:0002111,2.70e-09,3;UBERON:0004178,2.70e-09,3;UBERON:0003210,4.31e-07,2;UBERON:0000947,4.52e-07,4;UBERON:0001637,4.52e-07,4;UBERON:0004573,4.52e-07,4;UBERON:0003509,4.52e-07,4;UBERON:0004571,4.52e-07,4;UBERON:0010191,4.52e-07,4;UBERON:0004572,4.52e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.52065396829272,2.20256102594018,3.9119567217402,0,0.219686182734472,1.1665793944457,1.95980990275508,0,0,0,0,10.8048963135098,9.16907007804022,22.17389996793,0,0,0,2.03306719241479,3.55717918444456,0.449949858640699,2.96659908770092,1.4209602298922,3.59520132622086,0.384218305321555,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0.151143120213571,0.289864488701678,2.58127163094416,0,0.539703191637817,0,0,0.140444420131752,7.83979483859066,17.6654483129951,12.3668851078619,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.520455980298408,0.913396434936424,0.230615497256059,0.452167921657868,0,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0.712875546952214,0.622034853050465,0,0,0,0,0.540186389416048,0.90422890701429,0.408218994907967,0.2562274405697,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,0.196764231747404,1.07986979021165,0,0.268273401399619,0.233530684734339,0.329119699826961,0.656669856316381,0.0810688095458557,0,0.658650345873152,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.779856348476481,0,0.648414149624083,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.442830443938806,0.941992367048249,0.246794327843601,0.592905254174298,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,1.66277871149944,0,0,0.339490171550376,0.469380496577004,0.837531287209079,0.714130922658041,0.390267295715598,0.472905432318573,0.8858587585951,0.637819074629948,0.327726629431476,2.07221978239075,1.01254341007058,0,0,0.491764273019036,0,0.160550589987792,0,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.477489376012546,0,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0.674321731924103,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,1.16670713006429,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,0,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.320125762024346,0.17230640686684,0.476293691283074,0.811190281613988,0.192909220463705,0.824171801606613,0.441596760403192,0,0.70990322463735,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,1.68342681497322,0.237270036248348,0.29551344712669,1.22769312950907,0.154936841185966,0.192906610981141,0.749431733813838,0,0.644613162144895,0.382576664137687,0.882365676478062,0.463735671240843|short_description=p5@Bgn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12111 | |||
|HGNC= | |||
|MCL_coexpression_id=188 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENSMUST00000155231_5end | |||
|cluster_id=chrX:70737460..70737474,+ | |||
|description=CAGE_peak_5_at_Bgn_5end | |||
|id=chrX:70737460..70737474,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.29e-18,6;CL:0000187,3.29e-18,6;CL:0000056,3.29e-18,6;CL:0000222,1.63e-15,7;CL:0000355,6.42e-12,9;CL:0002494,1.43e-10,3;CL:0000737,1.43e-10,3;CL:0000746,1.43e-10,3;CL:0000513,1.43e-10,3;CL:0000151,7.58e-10,3;CL:0000499,7.58e-10,3;CL:0000327,7.58e-10,3;CL:0000192,2.70e-09,3;CL:0000359,2.70e-09,3;CL:0002539,2.70e-09,3;CL:0000514,2.70e-09,3;CL:0000708,4.31e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.42e-12,9;UBERON:0002036,6.42e-12,9;UBERON:0002385,6.42e-12,9;UBERON:0000486,6.42e-12,9;UBERON:0007503,6.42e-12,9;UBERON:0001015,6.42e-12,9;UBERON:0002329,6.42e-12,9;UBERON:0003082,6.42e-12,9;UBERON:0003059,6.42e-12,9;UBERON:0007282,6.42e-12,9;UBERON:0004290,6.42e-12,9;UBERON:0009618,6.42e-12,9;UBERON:0000383,1.17e-10,10;UBERON:0007524,1.26e-09,11;UBERON:0003077,1.26e-09,11;UBERON:0007285,1.26e-09,11;UBERON:0001135,2.70e-09,3;UBERON:0004237,2.70e-09,3;UBERON:0004695,2.70e-09,3;UBERON:0002111,2.70e-09,3;UBERON:0004178,2.70e-09,3;UBERON:0003210,4.31e-07,2;UBERON:0000947,4.52e-07,4;UBERON:0001637,4.52e-07,4;UBERON:0004573,4.52e-07,4;UBERON:0003509,4.52e-07,4;UBERON:0004571,4.52e-07,4;UBERON:0010191,4.52e-07,4;UBERON:0004572,4.52e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,1.52065396829272,2.20256102594018,3.9119567217402,0,0.219686182734472,1.1665793944457,1.95980990275508,0,0,0,0,10.8048963135098,9.16907007804022,22.17389996793,0,0,0,2.03306719241479,3.55717918444456,0.449949858640699,2.96659908770092,1.4209602298922,3.59520132622086,0.384218305321555,0.103689612308478,0.270011876663381,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0.151143120213571,0.289864488701678,2.58127163094416,0,0.539703191637817,0,0,0.140444420131752,7.83979483859066,17.6654483129951,12.3668851078619,0,1.28326477414318,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.520455980298408,0.913396434936424,0.230615497256059,0.452167921657868,0,0.125666591329675,0.247194967734374,0.578397427679647,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0.712875546952214,0.622034853050465,0,0,0,0,0.540186389416048,0.90422890701429,0.408218994907967,0.2562274405697,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.74126083261083,1.23469281844766,0,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,0.196764231747404,1.07986979021165,0,0.268273401399619,0.233530684734339,0.329119699826961,0.656669856316381,0.0810688095458557,0,0.658650345873152,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.779856348476481,0,0.648414149624083,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0.189709611372772,0.442830443938806,0.941992367048249,0.246794327843601,0.592905254174298,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,1.66277871149944,0,0,0.339490171550376,0.469380496577004,0.837531287209079,0.714130922658041,0.390267295715598,0.472905432318573,0.8858587585951,0.637819074629948,0.327726629431476,2.07221978239075,1.01254341007058,0,0,0.491764273019036,0,0.160550589987792,0,0.983609672260053,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.477489376012546,0,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.457556346413045,0,0,0,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.87345025498471,0.674321731924103,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,1.16670713006429,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.314578033277133,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.386379188064381,1.68914227906064,0,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.320125762024346,0.17230640686684,0.476293691283074,0.811190281613988,0.192909220463705,0.824171801606613,0.441596760403192,0,0.70990322463735,0.476872379894642,0.436039249896986,0.470546902076653,0.169229215783353,0.365855945745545,0.526139422875686,0.407412341537585,1.68342681497322,0.237270036248348,0.29551344712669,1.22769312950907,0.154936841185966,0.192906610981141,0.749431733813838,0,0.644613162144895,0.382576664137687,0.882365676478062,0.463735671240843 | |||
|short_description=p5@Bgn | |||
}} |
Latest revision as of 23:34, 1 October 2015
Short description: | p5@Bgn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bgn_5end |
Coexpression cluster: | MCL_coexpression_mm9:188 |
Association with transcript: | 64bp_to_ENSMUST00000155231_5end |
EntrezGene: | Bgn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.29e-18 | 6 |
muscle cell | 3.29e-18 | 6 |
myoblast | 3.29e-18 | 6 |
mesodermal cell | 1.63e-15 | 7 |
multi-potent skeletal muscle stem cell | 6.42e-12 | 9 |
cardiocyte | 1.43e-10 | 3 |
striated muscle cell | 1.43e-10 | 3 |
cardiac muscle cell | 1.43e-10 | 3 |
cardiac muscle myoblast | 1.43e-10 | 3 |
secretory cell | 7.58e-10 | 3 |
stromal cell | 7.58e-10 | 3 |
extracellular matrix secreting cell | 7.58e-10 | 3 |
smooth muscle cell | 2.70e-09 | 3 |
vascular associated smooth muscle cell | 2.70e-09 | 3 |
aortic smooth muscle cell | 2.70e-09 | 3 |
smooth muscle myoblast | 2.70e-09 | 3 |
leptomeningeal cell | 4.31e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.42e-12 | 9 |
striated muscle tissue | 6.42e-12 | 9 |
muscle tissue | 6.42e-12 | 9 |
multilaminar epithelium | 6.42e-12 | 9 |
epithelial vesicle | 6.42e-12 | 9 |
musculature | 6.42e-12 | 9 |
somite | 6.42e-12 | 9 |
myotome | 6.42e-12 | 9 |
presomitic mesoderm | 6.42e-12 | 9 |
presumptive segmental plate | 6.42e-12 | 9 |
dermomyotome | 6.42e-12 | 9 |
trunk paraxial mesoderm | 6.42e-12 | 9 |
musculature of body | 1.17e-10 | 10 |
dense mesenchyme tissue | 1.26e-09 | 11 |
paraxial mesoderm | 1.26e-09 | 11 |
presumptive paraxial mesoderm | 1.26e-09 | 11 |
smooth muscle tissue | 2.70e-09 | 3 |
blood vessel smooth muscle | 2.70e-09 | 3 |
arterial system smooth muscle | 2.70e-09 | 3 |
artery smooth muscle tissue | 2.70e-09 | 3 |
aorta smooth muscle tissue | 2.70e-09 | 3 |
blood-cerebrospinal fluid barrier | 4.31e-07 | 2 |
aorta | 4.52e-07 | 4 |
artery | 4.52e-07 | 4 |
systemic artery | 4.52e-07 | 4 |
arterial blood vessel | 4.52e-07 | 4 |
systemic arterial system | 4.52e-07 | 4 |
aortic system | 4.52e-07 | 4 |
arterial system | 4.52e-07 | 4 |