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FFCP PHASE1:Mm9::chr5:135499391..135499450,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20907
|EntrezGene=20907
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=D6RFB9,O35526,Q497P1,Q5D0A4
|UniProt=D6RFB9,O35526,Q497P1,Q5D0A4
|association_with_transcript=0bp_to_ENSMUST00000150838,NM_016801,uc008zxk.1,uc008zxl.1_5end
|association_with_transcript=0bp_to_ENSMUST00000150838,NM_016801,uc008zxk.1,uc008zxl.1_5end
|cluster_id=chr5:135499391..135499450,+
|description=CAGE_peak_1_at_Stx1a_5end
|description=CAGE_peak_1_at_Stx1a_5end
|id=chr5:135499391..135499450,+
|id=chr5:135499391..135499450,+
|ontology_enrichment_celltype=CL:0000540!1.78e-16!33;CL:0000047!1.78e-16!33;CL:0000031!1.78e-16!33;CL:0000404!1.78e-16!33;CL:0000393!8.56e-14!39;CL:0000211!8.56e-14!39;CL:0000117!1.17e-13!23;CL:0000337!1.17e-13!23;CL:0000221!3.94e-11!44;CL:0000133!3.94e-11!44;CL:0002319!4.19e-11!43;CL:0000055!2.49e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-16,33;CL:0000047,1.76e-16,33;CL:0000031,1.76e-16,33;CL:0000404,1.76e-16,33;CL:0000393,8.48e-14,39;CL:0000211,8.48e-14,39;CL:0000117,1.16e-13,23;CL:0000337,1.16e-13,23;CL:0000221,3.91e-11,44;CL:0000133,3.91e-11,44;CL:0002319,4.16e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.37e-24!73;UBERON:0005743!1.37e-24!73;UBERON:0000073!6.79e-24!75;UBERON:0001016!6.79e-24!75;UBERON:0002346!4.04e-19!71;UBERON:0003075!4.04e-19!71;UBERON:0007284!4.04e-19!71;UBERON:0001049!1.06e-18!52;UBERON:0005068!1.06e-18!52;UBERON:0006241!1.06e-18!52;UBERON:0007135!1.06e-18!52;UBERON:0004121!1.27e-18!102;UBERON:0000924!1.27e-18!102;UBERON:0006601!1.27e-18!102;UBERON:0003080!3.60e-18!40;UBERON:0002020!9.24e-18!34;UBERON:0002780!9.97e-18!39;UBERON:0001890!9.97e-18!39;UBERON:0006240!9.97e-18!39;UBERON:0000955!1.05e-17!50;UBERON:0006238!1.05e-17!50;UBERON:0003056!2.89e-17!49;UBERON:0002616!3.64e-17!49;UBERON:0000033!6.37e-16!63;UBERON:0002791!1.13e-14!29;UBERON:0003528!1.13e-14!29;UBERON:0001893!1.13e-14!29;UBERON:0007811!1.76e-11!86;UBERON:0000153!2.47e-11!94;UBERON:0000956!2.96e-10!21;UBERON:0001869!2.96e-10!21;UBERON:0000203!2.96e-10!21;UBERON:0002619!3.00e-08!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0000468!7.18e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-24,73;UBERON:0001016,6.68e-24,75;UBERON:0000073,2.79e-20,54;UBERON:0002346,9.88e-20,64;UBERON:0003075,9.88e-20,64;UBERON:0007284,9.88e-20,64;UBERON:0001049,1.05e-18,52;UBERON:0005068,1.05e-18,52;UBERON:0006241,1.05e-18,52;UBERON:0007135,1.05e-18,52;UBERON:0004121,1.10e-18,95;UBERON:0000924,1.10e-18,95;UBERON:0006601,1.10e-18,95;UBERON:0003080,3.56e-18,40;UBERON:0002020,9.14e-18,34;UBERON:0002780,9.85e-18,39;UBERON:0001890,9.85e-18,39;UBERON:0006240,9.85e-18,39;UBERON:0003056,2.86e-17,49;UBERON:0010371,1.97e-16,73;UBERON:0000955,3.53e-16,47;UBERON:0006238,3.53e-16,47;UBERON:0010314,3.83e-16,92;UBERON:0002616,1.19e-15,46;UBERON:0003528,1.12e-14,29;UBERON:0002791,1.12e-14,29;UBERON:0001893,1.12e-14,29;UBERON:0000956,2.94e-10,21;UBERON:0001869,2.94e-10,21;UBERON:0000203,2.94e-10,21;UBERON:0002619,2.99e-08,17;UBERON:0002021,3.35e-08,10;UBERON:0000411,3.35e-08,10;UBERON:0001950,3.35e-08,10
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086926,1.12738587736838,12.4098733216502,13.0712207461107,14.9727415024917,13.1743019947286,15.0370951686793,14.9043693080108,14.9735042570543,16.9872137969652,9.42178071221424,4.03242008761012,5.37218905067903,6.89265731986558,5.13554785824136,2.07873316764472,3.04345382634718,5.16571522431289,3.96644983415897,3.69223817936443,5.25025539730368,3.73413352609499,4.2346997757473,5.36018344068638,5.38786313185845,5.72696820689688,2.0405734525369,6.65957860122194,7.08739467214858,9.23365390002431,5.02292944483695,5.44279178808428,6.41030684935428,4.71610433973945,1.50471631210609,401.538560100734,418.895965221531,397.589486326941,303.149013654265,353.502580201651,388.272463258306,378.687622630043,300.814563753779,299.073989929575,294.087857075034,7.16132698330819,20.7492934168536,19.9758318732337,16.7743634777123,17.1882793354945,15.0751676929012,19.5577120465421,20.6035057238894,20.5388294138762,16.172621552883,19.7713853914387,19.4285131627658,17.0427543595186,18.119118130578,17.2880761556396,17.6228665774737,13.4425818096032,19.4838312668342,16.8955219329356,18.9886606973373,21.9436321526666,18.4574838405711,16.6905332963125,17.8776092457764,15.0575008664529,16.2460047152019,13.5366699925852,16.5733918205841,16.2964936615034,18.5176949647054,14.8293772655218,15.2681947682123,19.6430900721451,15.9584946421545,12.1531164918119,40.9689347818231,18.9484602840781,16.7599422157673,11.2860115920618,3.75005412503176,6.26043156175138
|phase1_expression=20.6592012765184,1.04692622291808,0.909998478779072,0.90739263392049,0,4.02910252588535,5.60670337429262,24.9208014242242,9.01047821770667,14.0438715793196,3.5955773327356,3.82906363177615,13.8672591244277,20.9808965805594,1.99865857089398,2.02475267389826,0.699561878128147,3.47008381894061,2.74228867211478,2.12194825899015,19.2197835741418,1.98581902401771,3.6567970479451,2.55987876469451,1.60586496747019,1.72269589234506,0.430761996159075,1.50829862880122,1.90023419456374,1.51218077855958,3.76941868114018,1.90509202037889,0.61506478758457,0,1.1554064790051,1.49611180822643,1.83752420636132,0.418531630736908,0,0,0,0,0,2.39203954153597,3.95370031756107,3.12029478674859,5.47673941043627,6.5407546914134,2.19686182734472,2.13872888981712,4.75953833526233,7.18762821824858,2.01339127269284,17.4086914082723,33.9454737133889,20.0662360108039,7.44986943840768,11.3447860301037,81.3312172655583,94.1603943104219,88.1025650873589,5.76035704517525,2.66788438833342,0.899899717281399,0,2.1314403448383,4.19440154725767,5.37905627450176,27.5814368740551,38.3416864862001,28.3938697824366,79.1253226798536,99.1699748872745,32.9500249888226,34.5043695665651,43.203282970671,27.5289702498472,38.5615761017267,32.4109785170674,94.2986957270886,109.053271174072,81.2624858068546,25.9640189071284,47.8348218526928,36.6715794664344,77.1926893941009,88.9823004994393,73.814180546819,7.1182621733193,5.36558076758177,16.232411367294,5.16254326188832,0,0.539703191637817,0,0.448026887097336,4.21333260395256,3.74946709671727,3.11743205523443,5.3000936176551,11.8308472612412,11.5493829672886,22.9324715735981,14.2213340630666,8.87613268145978,7.85415582972806,15.1657333504435,4.33898742932428,6.47344709117929,8.90652834388949,11.450031566565,14.3098774806706,11.0695438682908,8.74191315205211,11.8764594207062,4.52399728786832,10.3821886448437,5.63937491987655,3.5384422077995,3.558870698843,3.75430581382669,4.84875253135222,3.72783522436244,2.34224637609238,2.72280718857492,2.04365644166873,0.838705871541442,3.59941638596045,0.635351135365324,25.1648274200102,39.8025524452205,60.6910520705135,180.429644359583,211.220967754853,30.7526305948149,51.4304803924792,10.0820970211813,4.47865094196335,3.28539585963777,1.68353484709179,11.3204785377552,17.4725599369439,14.0448461248172,14.4676625122286,10.2054748726992,12.9394857487698,14.4300655821982,8.53721123438752,4.95806383745537,13.0483195315795,15.1317966780996,7.01426343768239,11.6779844674751,9.05455632957633,8.43706759272568,13.5343301436575,0,0.257347907114715,0.568326998791185,10.9776659443816,11.4917769390737,12.064158117888,9.46978942340841,9.83821158737019,9.2560267732427,6.0458825635106,5.36546802799238,3.61972561338225,7.07607354627966,5.41752631461014,6.08016071593918,4.9707995724613,4.61055242111206,3.48936688776967,58.4606057008274,50.5261646782287,2.31293148088659,2.11560453330835,9.81125952462076,13.7019636397659,13.6599509001419,9.07575860805041,13.3426826306922,7.22857379227725,4.74529061544512,4.28217282282428,7.79139147280835,6.96347652144028,7.99352757188393,6.29173586057955,2.16138049874694,3.18626037206988,8.91439134479484,11.3106027483632,11.270773567308,11.2008230314923,10.861339281387,8.83711330618014,8.15751328902919,3.98547399544926,3.92496819603437,1.85095745882701,1.1858105083486,3.50374722003798,3.14494392181125,3.14806957338795,2.43432145666204,2.65294875727659,2.5462585178142,5.17853047411459,3.08056930872567,3.56929837144506,1.43768206527355,2.97712758134803,3.74445207737473,2.02063102357689,1.07638448113147,0.482443521363367,4.43407656399851,11.9379589415405,14.6668478797823,11.0334305753872,11.4998221661366,14.0705256251125,9.04565835366852,12.4885534628991,10.0886492227962,9.7444463445461,10.8429242687091,7.04612253277673,7.9435091658312,4.77341893318988,1.50791283939272,1.08781136763742,3.44234991113325,3.03530420935206,12.36239542906,16.4096361229084,1.96721934452011,1.76729649043061,26.8181986503818,29.6733445665445,27.1433481143327,8.84184552424442,16.4871018820972,16.7015153165411,21.8597778904443,25.4262596382841,18.5785255634866,37.2732727049296,10.6455063906201,12.8207234640424,12.2165219515182,9.40329700943452,3.98235415019888,9.95400608235424,6.65111825322452,7.92141334974772,7.97315110778086,12.604841065701,6.97756391554197,12.3601468022352,10.6949213515416,3.47640433729398,1.05418608574999,4.12542172992747,9.53230896110606,11.7039711120352,19.7918786187614,16.7182887324642,26.4236948126988,28.0039043635251,29.6188237083818,19.1812917942198,2.11204537257339,2.33015277950202,3.52845436887939,3.79238381765404,4.19807509409354,5.06628569396509,4.65552141612232,3.61109979439135,3.20628920292836,12.0526446306831,1.02522528478712,5.98521917093345,5.00025223898222,2.26042148405629,2.32380187125743,2.51655990527175,1.5298058699447,1.6794174278839,0.690999869022119,2.86401185404534,13.4442797271983,12.8091264289915,9.07244862903131,7.10900206449194,8.95286511359328,6.60835297285622,7.02554373665355,5.49687478166462,3.24037433229482,0.621339313086926,1.12738587736838,12.4098733216502,13.0712207461107,14.9727415024917,13.1743019947286,15.0370951686793,14.9043693080108,14.9735042570543,16.9872137969652,9.42178071221424,4.03242008761012,5.37218905067903,6.89265731986558,5.13554785824136,2.07873316764472,3.04345382634718,5.16571522431289,3.96644983415897,3.69223817936443,5.25025539730368,3.73413352609499,4.2346997757473,5.36018344068638,5.38786313185845,5.72696820689688,2.0405734525369,6.65957860122194,7.08739467214858,9.23365390002431,5.02292944483695,5.44279178808428,6.41030684935428,4.71610433973945,1.50471631210609,401.538560100734,418.895965221531,397.589486326941,303.149013654265,353.502580201651,388.272463258306,378.687622630043,300.814563753779,299.073989929575,294.087857075034,7.16132698330819,20.7492934168536,19.9758318732337,16.7743634777123,17.1882793354945,15.0751676929012,19.5577120465421,20.6035057238894,20.5388294138762,16.172621552883,19.7713853914387,19.4285131627658,17.0427543595186,18.119118130578,17.2880761556396,17.6228665774737,13.4425818096032,19.4838312668342,16.8955219329356,18.9886606973373,21.9436321526666,18.4574838405711,16.6905332963125,17.8776092457764,15.0575008664529,16.2460047152019,13.5366699925852,16.5733918205841,16.2964936615034,18.5176949647054,14.8293772655218,15.2681947682123,19.6430900721451,15.9584946421545,12.1531164918119,40.9689347818231,18.9484602840781,16.7599422157673,11.2860115920618,3.75005412503176,6.26043156175138
|short_description=p1@Stx1a
|short_description=p1@Stx1a
}}
}}

Latest revision as of 00:07, 2 October 2015

Short description:p1@Stx1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stx1a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000150838, NM_016801, uc008zxk.1, uc008zxl.1_5end
EntrezGene:Stx1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stx1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C381.33
Mouse Granule cells, donor2.CNhs12357.11731-123E394.16
Mouse Granule cells, donor3.CNhs12108.11636-122C788.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F179.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D599.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F234.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D494.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4109.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D881.26
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E547.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D677.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F688.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E173.81
Mouse Schwann, donor1.CNhs12507.11728-123D97.12
Mouse Schwann, donor2.CNhs12573.11746-123F95.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C111.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A810.38
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F160.69
cortex, adult.CNhs10473.12-14D5180.43
cortex, neonate N30.CNhs11107.1392-42F2211.22
diencephalon, adult.CNhs10482.20-12F230.75
diencephalon, neonate N30.CNhs11201.1388-42B251.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C611.32
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C914.04
eyeball, embryo E17.CNhs11023.1261-18D414.47
eyeball, neonate N00.CNhs11207.633-15C610.21
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G814.43
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E215.13
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I613.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E910.98
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I912.06
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E858.46
hippocampus, neonate N00.CNhs11228.627-43G150.53
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I98.91
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G78.84
kidney, neonate N10.CNhs11206.758-6D58.16
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C511.03
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A614.07
lung, embryo E18.CNhs10583.1287-20I69.05
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A39.74
lung, neonate N10.CNhs11219.750-23E610.84
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A316.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.82
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E327.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D525.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I937.27
ovary, adult.CNhs10507.91-2I710.65
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I412.22
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F49.95
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E57.92
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I712.60
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D810.69
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E611.70
pituitary gland, embryo E13.CNhs11009.370-44C719.79
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B926.42
pituitary gland, embryo E16.CNhs11036.449-43F628.00
pituitary gland, embryo E17.CNhs11039.1265-44F529.62
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H35.07
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E313.44
stomach, embryo E15.CNhs10603.1252-16G812.81
stomach, embryo E16.CNhs11022.459-17D49.07
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B86.61
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F512.41
testis, embryo E15.CNhs11034.443-27C513.07
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I513.17
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B714.90
testis, neonate N07.CNhs11222.726-26I414.97
testis, neonate N10.CNhs11204.763-44D916.99
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A25.36
thymus, neonate N25.CNhs11125.1362-25G75.39
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1401.54
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2418.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3397.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7303.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4353.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5388.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6378.69
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7300.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8299.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9294.09
whole body, embryo E11.CNhs11014.324-5I87.16
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H219.98
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F215.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.54
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.04
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I540.97
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C611.29
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.76e-1633
neuronal stem cell1.76e-1633
neuroblast1.76e-1633
electrically signaling cell1.76e-1633
electrically responsive cell8.48e-1439
electrically active cell8.48e-1439
CNS neuron (sensu Vertebrata)1.16e-1323
neuroblast (sensu Vertebrata)1.16e-1323
ectodermal cell3.91e-1144
neurectodermal cell3.91e-1144
neural cell4.16e-1143

Uber anatomy
Ontology termp-valuen
central nervous system1.35e-2473
nervous system6.68e-2475
regional part of nervous system2.79e-2054
neurectoderm9.88e-2064
neural plate9.88e-2064
presumptive neural plate9.88e-2064
neural tube1.05e-1852
neural rod1.05e-1852
future spinal cord1.05e-1852
neural keel1.05e-1852
ectoderm-derived structure1.10e-1895
ectoderm1.10e-1895
presumptive ectoderm1.10e-1895
anterior neural tube3.56e-1840
gray matter9.14e-1834
regional part of forebrain9.85e-1839
forebrain9.85e-1839
future forebrain9.85e-1839
pre-chordal neural plate2.86e-1749
ecto-epithelium1.97e-1673
brain3.53e-1647
future brain3.53e-1647
structure with developmental contribution from neural crest3.83e-1692
regional part of brain1.19e-1546
brain grey matter1.12e-1429
regional part of telencephalon1.12e-1429
telencephalon1.12e-1429
cerebral cortex2.94e-1021
cerebral hemisphere2.94e-1021
pallium2.94e-1021
regional part of cerebral cortex2.99e-0817
occipital lobe3.35e-0810
visual cortex3.35e-0810
neocortex3.35e-0810
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