FFCP PHASE1:Mm9::chrX:93291373..93291395,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:93291373..93291395,+
|short_description=p2@Msn
|description=CAGE_peak_2_at_Msn_5end
|association_with_transcript=0bp_to_ENSMUST00000117399,ENSMUST000001499...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17698 | |EntrezGene=17698 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P26041 | |UniProt=P26041 | ||
|association_with_transcript=0bp_to_ENSMUST00000117399,ENSMUST00000149985,NM_010833,uc009tue.1,uc009tuf.1,uc009tug.1_5end | |||
|cluster_id=chrX:93291373..93291395,+ | |||
|description=CAGE_peak_2_at_Msn_5end | |||
|id=chrX:93291373..93291395,+ | |||
|ontology_enrichment_celltype=CL:0000219!2.82e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.93e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.32e-12,87;UBERON:0000926,6.16e-11,120;UBERON:0004120,6.16e-11,120;UBERON:0006603,6.16e-11,120;UBERON:0004872,7.34e-11,33;UBERON:0004535,2.82e-09,23;UBERON:0001009,2.82e-09,23;UBERON:0005178,3.91e-09,17;UBERON:0005181,3.91e-09,17;UBERON:0002224,3.91e-09,17;UBERON:0000915,3.91e-09,17;UBERON:0008947,3.91e-09,17;UBERON:0003258,3.91e-09,17;UBERON:0002204,9.50e-08,32;UBERON:0000065,1.30e-07,41;UBERON:0002048,2.68e-07,14;UBERON:0000117,2.68e-07,14;UBERON:0000171,2.68e-07,14;UBERON:0000170,2.68e-07,14;UBERON:0005597,2.68e-07,14;UBERON:0000118,2.68e-07,14;UBERON:0001004,3.73e-07,42;UBERON:0007100,4.11e-07,18;UBERON:0000948,4.11e-07,18;UBERON:0005498,4.11e-07,18;UBERON:0004140,4.11e-07,18;UBERON:0009881,4.11e-07,18;UBERON:0004141,4.11e-07,18;UBERON:0003084,4.11e-07,18;UBERON:0007005,4.11e-07,18;UBERON:0004139,4.11e-07,18;UBERON:0004291,4.11e-07,18 | |||
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| ||
|short_description=p2@Msn | |||
}} | }} |
Latest revision as of 00:50, 2 October 2015
Short description: | p2@Msn |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Msn_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000117399, ENSMUST00000149985, NM_010833, uc009tue.1, uc009tuf.1, uc009tug.1_5end |
EntrezGene: | Msn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.93e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.32e-12 | 87 |
mesoderm | 6.16e-11 | 120 |
mesoderm-derived structure | 6.16e-11 | 120 |
presumptive mesoderm | 6.16e-11 | 120 |
splanchnic layer of lateral plate mesoderm | 7.34e-11 | 33 |
cardiovascular system | 2.82e-09 | 23 |
circulatory system | 2.82e-09 | 23 |
thoracic cavity element | 3.91e-09 | 17 |
thoracic segment organ | 3.91e-09 | 17 |
thoracic cavity | 3.91e-09 | 17 |
thoracic segment of trunk | 3.91e-09 | 17 |
respiratory primordium | 3.91e-09 | 17 |
endoderm of foregut | 3.91e-09 | 17 |
musculoskeletal system | 9.50e-08 | 32 |
respiratory tract | 1.30e-07 | 41 |
lung | 2.68e-07 | 14 |
respiratory tube | 2.68e-07 | 14 |
respiration organ | 2.68e-07 | 14 |
pair of lungs | 2.68e-07 | 14 |
lung primordium | 2.68e-07 | 14 |
lung bud | 2.68e-07 | 14 |
respiratory system | 3.73e-07 | 42 |
primary circulatory organ | 4.11e-07 | 18 |
heart | 4.11e-07 | 18 |
primitive heart tube | 4.11e-07 | 18 |
primary heart field | 4.11e-07 | 18 |
anterior lateral plate mesoderm | 4.11e-07 | 18 |
heart tube | 4.11e-07 | 18 |
heart primordium | 4.11e-07 | 18 |
cardiac mesoderm | 4.11e-07 | 18 |
cardiogenic plate | 4.11e-07 | 18 |
heart rudiment | 4.11e-07 | 18 |