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FFCP PHASE1:Mm9::chr9:4796034..4796066,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|association_with_transcript=167bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|association_with_transcript=167bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|cluster_id=chr9:4796034..4796066,-
|description=CAGE_peak_5_at_Gria4_5end
|description=CAGE_peak_5_at_Gria4_5end
|id=chr9:4796034..4796066,-
|id=chr9:4796034..4796066,-
|ontology_enrichment_celltype=CL:0000540!6.96e-17!33;CL:0000047!6.96e-17!33;CL:0000031!6.96e-17!33;CL:0000404!6.96e-17!33;CL:0000393!1.09e-16!39;CL:0000211!1.09e-16!39;CL:0000221!3.66e-11!44;CL:0000133!3.66e-11!44;CL:0002319!1.03e-10!43;CL:0000055!1.54e-10!50;CL:0000117!6.52e-10!23;CL:0000337!6.52e-10!23;CL:0000107!3.73e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.06e-22,33;CL:0000047,1.06e-22,33;CL:0000031,1.06e-22,33;CL:0000404,1.06e-22,33;CL:0000393,7.50e-22,39;CL:0000211,7.50e-22,39;CL:0000221,9.69e-16,44;CL:0000133,9.69e-16,44;CL:0002319,4.78e-15,43;CL:0000117,4.03e-12,23;CL:0000337,4.03e-12,23;CL:0000107,5.77e-12,9;CL:0002321,2.32e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.18e-29!102;UBERON:0000924!5.18e-29!102;UBERON:0006601!5.18e-29!102;UBERON:0001017!2.45e-26!73;UBERON:0005743!2.45e-26!73;UBERON:0000073!1.14e-25!75;UBERON:0001016!1.14e-25!75;UBERON:0002346!3.68e-24!71;UBERON:0003075!3.68e-24!71;UBERON:0007284!3.68e-24!71;UBERON:0000033!1.23e-18!63;UBERON:0001049!2.39e-17!52;UBERON:0005068!2.39e-17!52;UBERON:0006241!2.39e-17!52;UBERON:0007135!2.39e-17!52;UBERON:0000955!3.53e-16!50;UBERON:0006238!3.53e-16!50;UBERON:0003056!1.22e-15!49;UBERON:0002616!1.67e-15!49;UBERON:0002020!5.13e-14!34;UBERON:0003080!8.70e-13!40;UBERON:0002780!3.67e-12!39;UBERON:0001890!3.67e-12!39;UBERON:0006240!3.67e-12!39;UBERON:0002791!3.15e-11!29;UBERON:0003528!3.15e-11!29;UBERON:0001893!3.15e-11!29;UBERON:0002410!3.73e-08!9;UBERON:0000956!5.11e-08!21;UBERON:0001869!5.11e-08!21;UBERON:0000203!5.11e-08!21;UBERON:0007811!9.65e-08!86;UBERON:0000153!1.11e-07!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0002619!4.15e-07!17;UBERON:0000010!8.32e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-36,73;UBERON:0001016,5.07e-35,75;UBERON:0004121,2.31e-33,95;UBERON:0000924,2.31e-33,95;UBERON:0006601,2.31e-33,95;UBERON:0002346,5.91e-28,64;UBERON:0003075,5.91e-28,64;UBERON:0007284,5.91e-28,64;UBERON:0010371,3.08e-26,73;UBERON:0000073,3.60e-24,54;UBERON:0001049,1.37e-22,52;UBERON:0005068,1.37e-22,52;UBERON:0006241,1.37e-22,52;UBERON:0007135,1.37e-22,52;UBERON:0010314,3.92e-20,92;UBERON:0002020,1.84e-19,34;UBERON:0000955,2.27e-18,47;UBERON:0006238,2.27e-18,47;UBERON:0002616,2.11e-17,46;UBERON:0003056,1.07e-16,49;UBERON:0003528,3.71e-15,29;UBERON:0002791,3.71e-15,29;UBERON:0001893,3.71e-15,29;UBERON:0003080,7.45e-15,40;UBERON:0002780,5.91e-14,39;UBERON:0001890,5.91e-14,39;UBERON:0006240,5.91e-14,39;UBERON:0002410,5.77e-12,9;UBERON:0000956,4.48e-11,21;UBERON:0001869,4.48e-11,21;UBERON:0000203,4.48e-11,21;UBERON:0002021,5.59e-11,10;UBERON:0000411,5.59e-11,10;UBERON:0001950,5.59e-11,10;UBERON:0002619,3.86e-10,17;UBERON:0000010,3.09e-09,11;UBERON:0003076,1.06e-08,12;UBERON:0003057,1.06e-08,12;UBERON:0002240,8.61e-07,6;UBERON:0005174,8.61e-07,6;UBERON:0001137,8.61e-07,6
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.76255545165808,1.31790010585369,1.83546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.270011876663381,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,1.0543001812006,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,0.791317726381163,1.09785172322892,2.08365348222704,3.90856198601933,4.50210088025344,4.27835093775068,7.07108605136802,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,1.21439728736295,1.21786191324856,0.691846491768175,0.60289056221049,2.70454026412121,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,29.5708604981663,28.6941988334433,0,0,0,0,7.78911324905078,2.74500361691176,1.7591609295801,6.43149984711423,6.13717097592793,4.77912502486988,5.353961681236,1.62942982160506,0.373220911830279,0,0.841767423545896,0.910843100738926,0.689706313300419,1.80062129805349,1.80845781402858,1.97305847538851,2.43416068541215,1.68663104207512,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,2.98423375899925,0,0,0.853153002140936,0.464473343720877,1.28867461322093,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,2.28497025219458,4.50830942692322,1.83286195060783,0.969762435838129,1.82353131714828,1.83385957660346,0.442830443938806,0.627994911365499,0.616985819609003,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,8.99083303931635,6.68106613575558,0,0,36.5989534522858,36.3108032195874,43.3001029442926,36.5622260867405,31.4146130456176,33.4030306330822,36.0281524490656,26.5952830699294,27.2748566783101,17.9939937196212,0,0.890328018336276,1.46598263418218,0.824850614862677,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0,0.886701168211368,0.535106452806212,1.31639216481697,0.304464949114599,0,0,0.441056796109924,0.16488625294148,1.45317984026315,0.663442174209714,0.716234064018819,0.820704498725306,0.291480836629851,7.23158677840988,0,0,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.40406943068342,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.01373675294467,1.76035857968631,0.5208175393758,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,5.64751842617067,6.44455331110048,4.01026859407578,3.60891682921744,6.16574267793578,8.3093328712867,6.75022500231806,8.55610286126019,5.89085131679466,7.24864436452548,0,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.749132059759059,0.960377286073039,1.03383844120104,0.952587382566147,0.695305955669133,2.50781986602817,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.941093804153306,1.01537529470012,0.914639864363863,0.263069711437843,1.08643291076689,0.561142271657738,1.30498519936592,0.29551344712669,0.818462086339379,0.77468420592983,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,1.76255545165808,1.31790010585369,1.83546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,1.01158230429799,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.03689612308478,0.270011876663381,1.26194976810829,5.42736870367227,3.97563373712904,1.34739879136449,1.0543001812006,0.919218786610021,4.40463523997555,3.44755812830007,4.76180253094355,0.791317726381163,1.09785172322892,2.08365348222704,3.90856198601933,4.50210088025344,4.27835093775068,7.07108605136802,5.41012387036591,2.05039390407831,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0.22836775943812,0,1.03909497345377,1.21439728736295,1.21786191324856,0.691846491768175,0.60289056221049,2.70454026412121,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0,0,29.5708604981663,28.6941988334433,0,0,0,0,7.78911324905078,2.74500361691176,1.7591609295801,6.43149984711423,6.13717097592793,4.77912502486988,5.353961681236,1.62942982160506,0.373220911830279,0,0.841767423545896,0.910843100738926,0.689706313300419,1.80062129805349,1.80845781402858,1.97305847538851,2.43416068541215,1.68663104207512,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,0.696504333044333,0.205782136407943,1.19420560091096,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,3.78521907415429,2.98423375899925,0,0,0.853153002140936,0.464473343720877,1.28867461322093,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.251335208800269,0.795825888164603,0.19496408711912,0,0.432276099749388,0.199141273254367,0.948339504765408,2.28497025219458,4.50830942692322,1.83286195060783,0.969762435838129,1.82353131714828,1.83385957660346,0.442830443938806,0.627994911365499,0.616985819609003,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.651859905768103,0.339490171550376,0,0,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,8.99083303931635,6.68106613575558,0,0,36.5989534522858,36.3108032195874,43.3001029442926,36.5622260867405,31.4146130456176,33.4030306330822,36.0281524490656,26.5952830699294,27.2748566783101,17.9939937196212,0,0.890328018336276,1.46598263418218,0.824850614862677,0,0,0,0,0,0.922305443831782,0,0,0,0,0,0,2.38307724027652,0.720244376125241,0.258717367565509,0,0.886701168211368,0.535106452806212,1.31639216481697,0.304464949114599,0,0,0.441056796109924,0.16488625294148,1.45317984026315,0.663442174209714,0.716234064018819,0.820704498725306,0.291480836629851,7.23158677840988,0,0,0.370389054739423,0,0,0,0,0,0,0,0.949007980743406,1.42323626988794,1.40406943068342,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.972255941720238,0.516639293910924,1.01373675294467,1.76035857968631,0.5208175393758,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,5.64751842617067,6.44455331110048,4.01026859407578,3.60891682921744,6.16574267793578,8.3093328712867,6.75022500231806,8.55610286126019,5.89085131679466,7.24864436452548,0,0.399024873401031,0.682934423016537,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.749132059759059,0.960377286073039,1.03383844120104,0.952587382566147,0.695305955669133,2.50781986602817,0.824171801606613,1.17759136107518,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.941093804153306,1.01537529470012,0.914639864363863,0.263069711437843,1.08643291076689,0.561142271657738,1.30498519936592,0.29551344712669,0.818462086339379,0.77468420592983,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0
|short_description=p5@Gria4
|short_description=p5@Gria4
}}
}}

Latest revision as of 18:44, 26 September 2015

Short description:p5@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 167bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I228.69
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.60
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E236.31
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E343.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D736.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.41
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D933.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D436.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D526.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.27
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.66e-3673
nervous system5.07e-3575
ectoderm-derived structure2.31e-3395
ectoderm2.31e-3395
presumptive ectoderm2.31e-3395
neurectoderm5.91e-2864
neural plate5.91e-2864
presumptive neural plate5.91e-2864
ecto-epithelium3.08e-2673
regional part of nervous system3.60e-2454
neural tube1.37e-2252
neural rod1.37e-2252
future spinal cord1.37e-2252
neural keel1.37e-2252
structure with developmental contribution from neural crest3.92e-2092
gray matter1.84e-1934
brain2.27e-1847
future brain2.27e-1847
regional part of brain2.11e-1746
pre-chordal neural plate1.07e-1649
brain grey matter3.71e-1529
regional part of telencephalon3.71e-1529
telencephalon3.71e-1529
anterior neural tube7.45e-1540
regional part of forebrain5.91e-1439
forebrain5.91e-1439
future forebrain5.91e-1439
autonomic nervous system5.77e-129
cerebral cortex4.48e-1121
cerebral hemisphere4.48e-1121
pallium4.48e-1121
occipital lobe5.59e-1110
visual cortex5.59e-1110
neocortex5.59e-1110
regional part of cerebral cortex3.86e-1017
peripheral nervous system3.09e-0911
posterior neural tube1.06e-0812
chordal neural plate1.06e-0812
spinal cord8.61e-076
dorsal region element8.61e-076
dorsum8.61e-076
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