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FFCP PHASE1:Mm9::chr9:4796218..4796267,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|association_with_transcript=0bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|cluster_id=chr9:4796218..4796267,-
|description=CAGE_peak_1_at_Gria4_5end
|description=CAGE_peak_1_at_Gria4_5end
|id=chr9:4796218..4796267,-
|id=chr9:4796218..4796267,-
|ontology_enrichment_celltype=CL:0000540!2.57e-16!33;CL:0000047!2.57e-16!33;CL:0000031!2.57e-16!33;CL:0000404!2.57e-16!33;CL:0000393!8.03e-15!39;CL:0000211!8.03e-15!39;CL:0000221!4.11e-12!44;CL:0000133!4.11e-12!44;CL:0000117!5.73e-12!23;CL:0000337!5.73e-12!23;CL:0002319!8.83e-12!43;CL:0000055!1.84e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.09e-18,33;CL:0000047,1.09e-18,33;CL:0000031,1.09e-18,33;CL:0000404,1.09e-18,33;CL:0000393,1.36e-16,39;CL:0000211,1.36e-16,39;CL:0000117,1.22e-13,23;CL:0000337,1.22e-13,23;CL:0000221,8.40e-12,44;CL:0000133,8.40e-12,44;CL:0002319,1.98e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.54e-29!102;UBERON:0000924!8.54e-29!102;UBERON:0006601!8.54e-29!102;UBERON:0001017!1.50e-28!73;UBERON:0005743!1.50e-28!73;UBERON:0000073!5.75e-28!75;UBERON:0001016!5.75e-28!75;UBERON:0002346!4.34e-26!71;UBERON:0003075!4.34e-26!71;UBERON:0007284!4.34e-26!71;UBERON:0000033!1.12e-21!63;UBERON:0001049!5.65e-21!52;UBERON:0005068!5.65e-21!52;UBERON:0006241!5.65e-21!52;UBERON:0007135!5.65e-21!52;UBERON:0000955!5.56e-20!50;UBERON:0006238!5.56e-20!50;UBERON:0002616!2.96e-19!49;UBERON:0003056!9.70e-18!49;UBERON:0002020!3.98e-16!34;UBERON:0003080!3.50e-15!40;UBERON:0002780!1.66e-14!39;UBERON:0001890!1.66e-14!39;UBERON:0006240!1.66e-14!39;UBERON:0002791!4.09e-13!29;UBERON:0003528!4.09e-13!29;UBERON:0001893!4.09e-13!29;UBERON:0000956!4.94e-09!21;UBERON:0001869!4.94e-09!21;UBERON:0000203!4.94e-09!21;UBERON:0007811!5.92e-09!86;UBERON:0000153!1.75e-08!94;UBERON:0002619!4.70e-08!17;UBERON:0002021!8.54e-08!10;UBERON:0000411!8.54e-08!10;UBERON:0001950!8.54e-08!10;UBERON:0000468!1.40e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.93e-30,73;UBERON:0001016,8.26e-29,75;UBERON:0002346,3.18e-27,64;UBERON:0003075,3.18e-27,64;UBERON:0007284,3.18e-27,64;UBERON:0004121,1.53e-26,95;UBERON:0000924,1.53e-26,95;UBERON:0006601,1.53e-26,95;UBERON:0000073,1.22e-23,54;UBERON:0010371,5.40e-23,73;UBERON:0001049,5.63e-22,52;UBERON:0005068,5.63e-22,52;UBERON:0006241,5.63e-22,52;UBERON:0007135,5.63e-22,52;UBERON:0003056,3.68e-19,49;UBERON:0000955,1.83e-18,47;UBERON:0006238,1.83e-18,47;UBERON:0002020,4.92e-18,34;UBERON:0002616,1.13e-17,46;UBERON:0010314,2.33e-17,92;UBERON:0003080,3.44e-16,40;UBERON:0002780,2.02e-15,39;UBERON:0001890,2.02e-15,39;UBERON:0006240,2.02e-15,39;UBERON:0003528,1.48e-14,29;UBERON:0002791,1.48e-14,29;UBERON:0001893,1.48e-14,29;UBERON:0000956,7.62e-10,21;UBERON:0001869,7.62e-10,21;UBERON:0000203,7.62e-10,21;UBERON:0002021,8.45e-09,10;UBERON:0000411,8.45e-09,10;UBERON:0001950,8.45e-09,10;UBERON:0002619,1.07e-08,17
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.95370031756107,1.83546752161682,0.782391344348039,0.218025156380447,0,0.972149495371417,0.139986421625363,0,0,0,0,0,0.85960031981627,1.03134418455488,20.0293296251002,19.5726662330652,20.9164363157039,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,4.25127410464758,3.51015439662396,5.67877395648731,38.8485338789173,35.3389665522582,8.94182834269164,6.80502844229478,6.43453150627015,63.8672109796454,50.4364985436492,56.2199911717851,14.1118327871307,13.9061218275663,19.7947080811569,42.4358158482099,31.5147061617741,40.7971321564083,49.4976023595762,52.1080351724717,30.0103107778734,0.37863096666592,0.831287161174641,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,1.82577746171277,0,0,0,6.76048414928066,0,0,0,0,0,0,1.37020655662872,0,2.07818994690755,4.68410382268567,3.34912026143355,2.99800146432876,3.3158980921577,4.11560474974967,0.502666365318702,0.494389935468748,0.578397427679647,0,0,0.220841518460394,0,0,84.9064311333487,77.0763881073515,0.510914110417183,0,0,0,58.1187680890712,33.8550446085784,21.6125485634127,43.2822557278768,45.7730668621292,46.3367339367819,44.7785886067011,5.70300437561771,0.373220911830279,0.505445516867349,5.05060454127538,1.17108398666433,4.59804208866946,3.60124259610698,6.32960234910003,11.0219128625151,12.9394857487698,10.1197862524507,13.9699820199068,0.431135985865684,1.89106080167819,0.879755620819744,1.09597866213787,1.39023624612799,1.74126083261083,0.205782136407943,1.99034266818493,0,0,0,0.207125772535502,0,0,1.18372367792605,0.590292695242212,0.462801338662135,0,0.536546802799238,0.583826711835847,0.329119699826961,0,0.324275238183423,0,0.219550115291051,0,21.2392848049769,11.216602749342,0.330418782983798,0,1.49301775374664,2.32236671860439,2.19074684247559,1.4117846723634,0.667134131534611,1.52180500890047,0,0.494096864172033,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,0.648414149624083,0.199141273254367,2.0863469104839,4.56994050438915,7.88954149711563,3.46207257337034,3.87904974335251,5.75113723100612,4.23684798732524,1.18088118383682,1.56998727841375,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.977789858652155,0.678980343100753,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,49.7706828962155,48.1740031893955,0,0,21.7700671397217,26.9402733564681,21.5423397732799,16.9667846546312,14.704712489438,22.0799694015289,12.9539424535966,16.3663280430335,15.4162233399144,58.8018009051907,0,2.13678724400706,7.32991317091092,1.48473110675282,0,0.485561272309963,0,0.377210159511796,0,0,0.775284879504663,0,0.712994756769443,0,0,0,14.9793426531667,1.26042765821917,0.388076051348264,0.428674070063185,4.61084607469911,6.0645397984704,4.77192159746151,2.13125464380219,0,0.21183207086382,0.661585194164886,0.98931751764888,0.807322133479528,1.02531972377865,0.954978752025092,0.984845398470368,0.291480836629851,52.2899351669637,0,0.82554747185289,0.185194527369712,0,0,0.228778173206523,0,0,0,0,2.37251995185852,2.64315307264903,2.05210147561422,2.71814784818809,1.9652630737156,0.944050424693745,1.1571483801547,0.785267825952089,0.388844919875379,0,0.56369293868419,2.69129782879162,2.48187735685646,4.083474955225,2.45403664607689,3.04121025883401,3.87278887530988,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,5.02292944483695,1.12609485270709,1.83151624267265,0.214368379079066,0,45.1801474093653,45.1118731777033,41.2484769676366,31.2772791865511,54.1215190618807,64.9638751755142,60.7520250208625,52.6875807772338,58.4553707589624,47.1161883694156,0.62272408550506,1.99512436700516,4.09760653809922,4.37592090722929,3.77303692730368,4.59608771125035,4.4449345560323,7.2112270033613,7.06022261101994,5.81203587056734,6.84394109703647,6.41329560712659,5.71213195566283,5.76226371643823,6.54764346093991,3.81034953026459,5.91010062318763,4.62982129112892,5.76920261124629,5.4463600449727,7.54312355247914,6.38912902173615,7.39152188836695,7.26732083161643,7.0582035311498,7.02301245500915,6.95126296916536,5.26139422875686,5.29636043998861,2.24456908663095,5.69448086996036,5.71325997778268,4.91077251803627,7.2820315357404,5.5942917184531,6.99469618226249,3.97683734357194,2.79332370262788,2.48674831689496,1.54413993383661,1.85494268496337
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26971862646661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.95370031756107,1.83546752161682,0.782391344348039,0.218025156380447,0,0.972149495371417,0.139986421625363,0,0,0,0,0,0.85960031981627,1.03134418455488,20.0293296251002,19.5726662330652,20.9164363157039,0.677689064138264,0,0,0,0,0.299600110518405,1.15265491596466,4.25127410464758,3.51015439662396,5.67877395648731,38.8485338789173,35.3389665522582,8.94182834269164,6.80502844229478,6.43453150627015,63.8672109796454,50.4364985436492,56.2199911717851,14.1118327871307,13.9061218275663,19.7947080811569,42.4358158482099,31.5147061617741,40.7971321564083,49.4976023595762,52.1080351724717,30.0103107778734,0.37863096666592,0.831287161174641,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,1.82577746171277,0,0,0,6.76048414928066,0,0,0,0,0,0,1.37020655662872,0,2.07818994690755,4.68410382268567,3.34912026143355,2.99800146432876,3.3158980921577,4.11560474974967,0.502666365318702,0.494389935468748,0.578397427679647,0,0,0.220841518460394,0,0,84.9064311333487,77.0763881073515,0.510914110417183,0,0,0,58.1187680890712,33.8550446085784,21.6125485634127,43.2822557278768,45.7730668621292,46.3367339367819,44.7785886067011,5.70300437561771,0.373220911830279,0.505445516867349,5.05060454127538,1.17108398666433,4.59804208866946,3.60124259610698,6.32960234910003,11.0219128625151,12.9394857487698,10.1197862524507,13.9699820199068,0.431135985865684,1.89106080167819,0.879755620819744,1.09597866213787,1.39023624612799,1.74126083261083,0.205782136407943,1.99034266818493,0,0,0,0.207125772535502,0,0,1.18372367792605,0.590292695242212,0.462801338662135,0,0.536546802799238,0.583826711835847,0.329119699826961,0,0.324275238183423,0,0.219550115291051,0,21.2392848049769,11.216602749342,0.330418782983798,0,1.49301775374664,2.32236671860439,2.19074684247559,1.4117846723634,0.667134131534611,1.52180500890047,0,0.494096864172033,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,0.648414149624083,0.199141273254367,2.0863469104839,4.56994050438915,7.88954149711563,3.46207257337034,3.87904974335251,5.75113723100612,4.23684798732524,1.18088118383682,1.56998727841375,0.370191491765402,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.977789858652155,0.678980343100753,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,49.7706828962155,48.1740031893955,0,0,21.7700671397217,26.9402733564681,21.5423397732799,16.9667846546312,14.704712489438,22.0799694015289,12.9539424535966,16.3663280430335,15.4162233399144,58.8018009051907,0,2.13678724400706,7.32991317091092,1.48473110675282,0,0.485561272309963,0,0.377210159511796,0,0,0.775284879504663,0,0.712994756769443,0,0,0,14.9793426531667,1.26042765821917,0.388076051348264,0.428674070063185,4.61084607469911,6.0645397984704,4.77192159746151,2.13125464380219,0,0.21183207086382,0.661585194164886,0.98931751764888,0.807322133479528,1.02531972377865,0.954978752025092,0.984845398470368,0.291480836629851,52.2899351669637,0,0.82554747185289,0.185194527369712,0,0,0.228778173206523,0,0,0,0,2.37251995185852,2.64315307264903,2.05210147561422,2.71814784818809,1.9652630737156,0.944050424693745,1.1571483801547,0.785267825952089,0.388844919875379,0,0.56369293868419,2.69129782879162,2.48187735685646,4.083474955225,2.45403664607689,3.04121025883401,3.87278887530988,0.651021924219751,0.838874755405687,0.241584120826006,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,5.02292944483695,1.12609485270709,1.83151624267265,0.214368379079066,0,45.1801474093653,45.1118731777033,41.2484769676366,31.2772791865511,54.1215190618807,64.9638751755142,60.7520250208625,52.6875807772338,58.4553707589624,47.1161883694156,0.62272408550506,1.99512436700516,4.09760653809922,4.37592090722929,3.77303692730368,4.59608771125035,4.4449345560323,7.2112270033613,7.06022261101994,5.81203587056734,6.84394109703647,6.41329560712659,5.71213195566283,5.76226371643823,6.54764346093991,3.81034953026459,5.91010062318763,4.62982129112892,5.76920261124629,5.4463600449727,7.54312355247914,6.38912902173615,7.39152188836695,7.26732083161643,7.0582035311498,7.02301245500915,6.95126296916536,5.26139422875686,5.29636043998861,2.24456908663095,5.69448086996036,5.71325997778268,4.91077251803627,7.2820315357404,5.5942917184531,6.99469618226249,3.97683734357194,2.79332370262788,2.48674831689496,1.54413993383661,1.85494268496337
|short_description=p1@Gria4
|short_description=p1@Gria4
}}
}}

Latest revision as of 18:45, 26 September 2015

Short description:p1@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C320.03
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D363.87
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F350.44
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D756.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.44
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D649.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.01
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B284.91
cerebellum, neonate N30.CNhs11135.1395-42I277.08
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A458.12
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F121.61
cortex, adult.CNhs10473.12-14D543.28
cortex, neonate N30.CNhs11107.1392-42F245.77
diencephalon, adult.CNhs10482.20-12F246.34
diencephalon, neonate N30.CNhs11201.1388-42B244.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C611.02
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E821.24
hippocampus, neonate N00.CNhs11228.627-43G111.22
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G75.75
kidney, neonate N10.CNhs11206.758-6D54.24
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C249.77
medulla oblongata, neonate N30.CNhs11200.1396-42A348.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.77
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.94
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C952.29
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A341.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A858.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.12
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.09e-1833
neuronal stem cell1.09e-1833
neuroblast1.09e-1833
electrically signaling cell1.09e-1833
electrically responsive cell1.36e-1639
electrically active cell1.36e-1639
CNS neuron (sensu Vertebrata)1.22e-1323
neuroblast (sensu Vertebrata)1.22e-1323
ectodermal cell8.40e-1244
neurectodermal cell8.40e-1244
neural cell1.98e-1143

Uber anatomy
Ontology termp-valuen
central nervous system1.93e-3073
nervous system8.26e-2975
neurectoderm3.18e-2764
neural plate3.18e-2764
presumptive neural plate3.18e-2764
ectoderm-derived structure1.53e-2695
ectoderm1.53e-2695
presumptive ectoderm1.53e-2695
regional part of nervous system1.22e-2354
ecto-epithelium5.40e-2373
neural tube5.63e-2252
neural rod5.63e-2252
future spinal cord5.63e-2252
neural keel5.63e-2252
pre-chordal neural plate3.68e-1949
brain1.83e-1847
future brain1.83e-1847
gray matter4.92e-1834
regional part of brain1.13e-1746
structure with developmental contribution from neural crest2.33e-1792
anterior neural tube3.44e-1640
regional part of forebrain2.02e-1539
forebrain2.02e-1539
future forebrain2.02e-1539
brain grey matter1.48e-1429
regional part of telencephalon1.48e-1429
telencephalon1.48e-1429
cerebral cortex7.62e-1021
cerebral hemisphere7.62e-1021
pallium7.62e-1021
occipital lobe8.45e-0910
visual cortex8.45e-0910
neocortex8.45e-0910
regional part of cerebral cortex1.07e-0817
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