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FFCP PHASE1:Mm9::chr7:26022759..26022847,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=606496
|EntrezGene=606496
|HGNC=
|HGNC=
|MCL_coexpression_id=240
|TSSclassifier=NA
|UniProt=Q2NL51,D3Z7E5
|UniProt=Q2NL51,D3Z7E5
|association_with_transcript=22bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end
|association_with_transcript=22bp_to_ENSMUST00000071739,ENSMUST00000108411,NM_001031667,uc009frx.1_5end
|cluster_id=chr7:26022759..26022847,-
|description=CAGE_peak_1_at_Gsk3a_5end
|description=CAGE_peak_1_at_Gsk3a_5end
|id=chr7:26022759..26022847,-
|id=chr7:26022759..26022847,-
|ontology_enrichment_celltype=CL:0000117!1.41e-10!23;CL:0000337!1.41e-10!23
|ontology_enrichment_celltype=CL:0000117!1.41e-10!23;CL:0000337!1.41e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-10,23;CL:0000337,1.41e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.11e-17!52;UBERON:0005068!1.11e-17!52;UBERON:0006241!1.11e-17!52;UBERON:0007135!1.11e-17!52;UBERON:0000955!4.64e-17!50;UBERON:0006238!4.64e-17!50;UBERON:0002616!1.75e-16!49;UBERON:0002020!5.11e-15!34;UBERON:0000033!4.76e-14!63;UBERON:0007811!6.04e-14!86;UBERON:0001017!3.41e-13!73;UBERON:0005743!3.41e-13!73;UBERON:0002791!5.73e-13!29;UBERON:0003528!5.73e-13!29;UBERON:0001893!5.73e-13!29;UBERON:0000153!7.82e-13!94;UBERON:0000073!1.01e-12!75;UBERON:0001016!1.01e-12!75;UBERON:0003080!2.60e-12!40;UBERON:0002346!7.86e-12!71;UBERON:0003075!7.86e-12!71;UBERON:0007284!7.86e-12!71;UBERON:0002780!1.03e-11!39;UBERON:0001890!1.03e-11!39;UBERON:0006240!1.03e-11!39;UBERON:0003056!2.60e-10!49;UBERON:0000064!4.71e-10!99;UBERON:0000956!6.43e-09!21;UBERON:0001869!6.43e-09!21;UBERON:0000203!6.43e-09!21;UBERON:0004121!7.36e-09!102;UBERON:0000924!7.36e-09!102;UBERON:0006601!7.36e-09!102;UBERON:0002619!3.04e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-18,54;UBERON:0001049,1.11e-17,52;UBERON:0005068,1.11e-17,52;UBERON:0006241,1.11e-17,52;UBERON:0007135,1.11e-17,52;UBERON:0000955,1.85e-15,47;UBERON:0006238,1.85e-15,47;UBERON:0002020,5.11e-15,34;UBERON:0002616,6.76e-15,46;UBERON:0002346,1.89e-13,64;UBERON:0003075,1.89e-13,64;UBERON:0007284,1.89e-13,64;UBERON:0001017,3.41e-13,73;UBERON:0003528,5.73e-13,29;UBERON:0002791,5.73e-13,29;UBERON:0001893,5.73e-13,29;UBERON:0001016,1.01e-12,75;UBERON:0003080,2.60e-12,40;UBERON:0002780,1.03e-11,39;UBERON:0001890,1.03e-11,39;UBERON:0006240,1.03e-11,39;UBERON:0010371,3.94e-11,73;UBERON:0003056,2.60e-10,49;UBERON:0004121,9.49e-10,95;UBERON:0000924,9.49e-10,95;UBERON:0006601,9.49e-10,95;UBERON:0000956,6.43e-09,21;UBERON:0001869,6.43e-09,21;UBERON:0000203,6.43e-09,21;UBERON:0011216,9.69e-08,194;UBERON:0010314,1.55e-07,92;UBERON:0002619,3.04e-07,17
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4269,46.7634774391752,33.157639632293,33.454127362315,40.1787117292967,35.1995944064382,37.2767085321265,44.498510137285,53.5309839695105,37.9016980983025,78.3533184771025,38.7247854253905,38.0554528051325,39.2791400454976,34.2273532215987,38.1840843609159,38.14110255987,42.7070382288156,38.1688013709587,60.6376143273275,75.4638616395607,60.9901462812384,53.3167316213132,49.3012594391171,54.6966664736517,81.2781198330366,76.0949588812245,70.7951197672617,61.2911537774495,57.7528093703404,70.0340553159449,65.73867270922,62.3730436734416,70.6194917640018,67.5548494609469,59.1766301235702,34.40782277298,17.3147743256288,20.4819231964176,49.4565360722408,37.161130139334,43.4069349513418,55.307041802399,42.1320567389705,83.5832727073258,68.5884602395694,71.0390436664852,69.0849793021624,69.1933344968349,56.6545423042275,70.8773625243396,77.4552469545659,68.4245037566149,82.8416498802912,51.3747370541674,50.6761589219309,39.7809301407133,41.8143553357466,52.1936774943676,52.7630869251541,41.3378913711004,45.9458177642734,46.5332853908132,42.9585259998456,49.681942778487,47.3452116879051,45.5097726303629,56.1500586590704,58.7564847415924,49.5345438934397,53.7703272384129,49.1918512182448,46.977792691577,39.7437084362873,40.8014410338644,36.0275886503455,40.2957161010972,37.0633362412438,42.5374399477294,48.907243361389,50.671048485758,38.6712475813629,45.3585740245178,39.2799590160417,53.0298531015058,54.2759697889355,37.6492559716114,50.6643470678109,36.2664428644546,67.1990454653074,43.7452107792914,48.990600323012,39.5966847382506,51.8389834930861,39.8812677267125
|phase1_expression=40.9981048588273,212.526023252371,205.65965620407,221.101338465293,260.465779572101,63.96200259843,47.8905913220828,40.1573535903302,29.56563165185,26.2152269480633,36.6406452002581,47.4644346022252,36.1233540154844,36.7165690159789,42.3049397505892,44.5445588257617,49.6688933470984,28.7070570475996,24.9548269162445,16.9755860719212,60.3807360072595,34.4539600667072,25.5975793356157,42.5579844630462,39.9172149056876,125.756800141189,102.952117082019,74.9839889746894,50.1661827364827,57.2108394555043,39.4680308966442,40.0069324279568,53.5106365198576,31.6963362030877,38.7061170466708,26.9300125480758,32.8712663582414,78.6839465785387,44.5361146378566,48.6877081895632,61.7643062432565,63.5232301011354,72.3410426016419,21.4024590558481,20.1740093126834,23.4939842766952,76.6743517461078,48.6196098728396,48.7703325670527,47.6353252731994,36.5364560442196,25.8754615856949,32.8853907873163,32.6412963905105,42.6839124910929,25.9832030396306,18.9112070359579,21.1425557833751,78.7011032743835,60.8339626162838,63.3831403506179,50.8266798103698,47.1326241938904,62.9929802096979,45.4878526780808,52.5755285060114,46.4380171303527,59.9380556301625,66.9834895512766,63.0477732008995,71.5104868594699,79.1253226798536,61.4014543845486,63.5727247925611,87.3152240976133,54.2339084099912,68.271846219621,97.8085009732538,95.5432636853834,80.978180666339,94.9641740593012,65.114171319595,75.9377757283756,66.9687505937699,92.1373434094165,62.1666315349439,70.1892386339577,77.7285689091503,38.5446324065907,43.9070764220424,10.7249860819621,15.487629785665,27.19885334831,38.318926606285,22.0923981932207,25.5375325645481,58.9866564553358,28.6322941931137,16.6263042945836,15.1936017039446,43.3797732912176,12.8326477414318,22.9324715735981,42.6640021891999,19.4841936910093,20.522149103483,24.7706978057244,53.0955040693629,42.9836886854305,54.9235914539852,43.0243610380017,33.1867371360234,42.4332514951148,33.6111488432348,37.3932088691541,52.277301993145,37.8208300633592,70.1306881061572,53.9612436689423,47.3976870345909,57.1979532812419,47.0328995541165,24.2309289583559,75.2446648319676,72.4685605574554,63.6088067469393,29.7141508774682,23.3962065087429,27.1930285936358,114.589839144689,104.767638045465,115.099386535384,115.245524287479,151.639266196886,105.764114680816,97.8314816298579,43.6890870917857,49.7627882440372,45.2373737596278,59.7654870717586,36.1734831436316,38.6235535448235,44.835470321532,37.525499641093,49.9387903770746,38.9465709665943,53.6910881727246,40.6164292060255,57.5566541130689,49.9240051643043,47.8587057725941,37.9208617099704,35.8680951501021,40.3972513165713,36.6292202806139,30.0541742895925,31.5995934290956,28.8229655968481,30.9738214341196,37.6968906014613,29.7848096175992,32.9513572473657,40.9568392562414,36.9916755685119,35.481435964097,38.8331687733181,34.0707219777516,47.1731983163365,44.4311594766397,39.4001913789829,60.0719878734791,48.0997958629343,46.1055242111206,64.8217002612596,118.603530990168,91.4822004051839,134.150025891422,96.2600062655301,36.472290841525,34.3710274353449,42.9128646202571,40.9417554985385,40.2504259359215,47.3661809020272,73.5520045393993,49.2449874624793,41.972979869645,47.3516403457939,44.6467759502785,74.6020109183004,54.8990646681723,61.1363708890907,43.8132851201619,31.7610865055046,32.6852433451933,31.3623044881784,31.8082078954906,37.4525278214301,40.0287279996549,36.9025369949005,34.2257226694197,47.2611137820496,41.799820419288,42.8791921690362,51.4984567196592,53.9669069723649,53.1493518037878,57.88251834058,43.5410206546228,34.5235364940973,33.0755862621072,34.0456152353221,34.5043695665651,32.0041214994913,29.3315412727687,34.0981485228601,29.6005732311155,46.3145780508832,43.0474933088189,35.8138768246216,46.9339132153035,34.6279974981384,32.6219445121018,44.0541457071975,33.0880660831559,54.0520204566103,43.5072997733087,33.8840975162626,48.9526139778485,38.5078789581984,48.8698498680484,45.1305062774316,27.142431109069,25.5635671394793,32.4564420192564,37.2514607511389,106.284490571918,104.552824440245,37.868972382012,66.9047957091588,32.1818383804582,24.5976408906882,40.2841753760334,29.3931621481639,32.7514050901119,39.0645612488589,28.3367491172426,35.3629588072687,34.3900366813475,88.0420406995751,47.6918686299783,50.926762648835,45.7712355783549,39.0979191444909,29.2039304347918,33.5037277893874,38.6974152914881,26.7819213253375,45.1811896107582,45.1929667477573,41.0900986137472,35.262771759318,34.580245703318,35.0800801308756,47.4383738587494,43.3169281642385,46.9806655940227,39.4333795928569,49.9324519401432,43.2960810763816,37.4187892985197,42.0950409540887,38.3399218002942,60.5885248738053,30.9766654644098,33.6812992673474,32.8587313101893,45.8383783177315,32.454349765877,44.872816146548,46.4358418172201,46.1235928283622,56.8387631428209,107.546675166096,51.4321351201537,39.4198917809755,36.8537109465726,47.4688511651821,49.6200046627321,59.7111032069024,31.9559448388448,33.3084456530306,27.7781947346892,54.4162252268615,46.5013910564269,46.7634774391752,33.157639632293,33.454127362315,40.1787117292967,35.1995944064382,37.2767085321265,44.498510137285,53.5309839695105,37.9016980983025,78.3533184771025,38.7247854253905,38.0554528051325,39.2791400454976,34.2273532215987,38.1840843609159,38.14110255987,42.7070382288156,38.1688013709587,60.6376143273275,75.4638616395607,60.9901462812384,53.3167316213132,49.3012594391171,54.6966664736517,81.2781198330366,76.0949588812245,70.7951197672617,61.2911537774495,57.7528093703404,70.0340553159449,65.73867270922,62.3730436734416,70.6194917640018,67.5548494609469,59.1766301235702,34.40782277298,17.3147743256288,20.4819231964176,49.4565360722408,37.161130139334,43.4069349513418,55.307041802399,42.1320567389705,83.5832727073258,68.5884602395694,71.0390436664852,69.0849793021624,69.1933344968349,56.6545423042275,70.8773625243396,77.4552469545659,68.4245037566149,82.8416498802912,51.3747370541674,50.6761589219309,39.7809301407133,41.8143553357466,52.1936774943676,52.7630869251541,41.3378913711004,45.9458177642734,46.5332853908132,42.9585259998456,49.681942778487,47.3452116879051,45.5097726303629,56.1500586590704,58.7564847415924,49.5345438934397,53.7703272384129,49.1918512182448,46.977792691577,39.7437084362873,40.8014410338644,36.0275886503455,40.2957161010972,37.0633362412438,42.5374399477294,48.907243361389,50.671048485758,38.6712475813629,45.3585740245178,39.2799590160417,53.0298531015058,54.2759697889355,37.6492559716114,50.6643470678109,36.2664428644546,67.1990454653074,43.7452107792914,48.990600323012,39.5966847382506,51.8389834930861,39.8812677267125
|short_description=p1@Gsk3a
|short_description=p1@Gsk3a
}}
}}

Latest revision as of 10:24, 26 September 2015

Short description:p1@Gsk3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gsk3a_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 22bp_to_ENSMUST00000071739, ENSMUST00000108411, NM_001031667, uc009frx.1_5end
EntrezGene:Gsk3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gsk3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5212.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6205.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I3221.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I4260.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I763.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E940.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F226.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E636.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F147.46
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E436.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A142.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A344.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A360.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.60
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D142.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D239.92
GP2+ M cell, pool1.CNhs13228.11845-124H9125.76
GP2+ M cell, pool2.CNhs13231.11846-124I1102.95
GP2+ M cell, pool3.CNhs13240.11847-124I274.98
Ileum epithelium, pool1.CNhs13199.10252-104B950.17
Ileum epithelium, pool2.CNhs13232.10253-104C157.21
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C839.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I340.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G653.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F538.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.87
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G878.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H144.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G961.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H263.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H472.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B323.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B776.67
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C248.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.77
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C347.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C436.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A232.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A142.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.14
Mouse Granule cells, donor1.CNhs12131.11713-123C378.70
Mouse Granule cells, donor2.CNhs12357.11731-123E360.83
Mouse Granule cells, donor3.CNhs12108.11636-122C763.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C650.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D147.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C762.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E745.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D252.58
Mouse Microglia, donor1.CNhs12629.11718-123C846.44
Mouse Microglia, donor2.CNhs12634.11736-123E859.94
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D566.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F563.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D971.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F179.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D561.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D263.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F287.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F397.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D795.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D480.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F494.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E475.94
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E566.97
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I692.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D662.17
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F670.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E177.73
Mouse Schwann, donor1.CNhs12507.11728-123D938.54
Mouse Schwann, donor2.CNhs12573.11746-123F943.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C838.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A758.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G220.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B653.10
accessory axillary lymph node, adult.CNhs10475.1063-29H942.98
adrenal gland, adult.CNhs10508.49-24D754.92
adrenal gland, embryo E14.CNhs11038.406-44C543.02
adrenal gland, embryo E16.CNhs11004.1254-43D633.19
adrenal gland, embryo E17.CNhs11043.1263-45I142.43
adrenal gland, embryo E18.CNhs11026.1262-18F533.61
adrenal gland, neonate N00.CNhs11191.1311-23C137.39
adrenal gland, neonate N25.CNhs11223.1377-27I352.28
amnion, adult pregnant day17.5.CNhs10488.583-22A837.82
aorta, adult.CNhs10498.46-23H170.13
bone (os femoris), adult.CNhs10483.56-12G253.96
bone (os femoris), neonate N02.CNhs11227.1985-43F547.40
bone (os femoris), neonate N16.CNhs11225.1525-43A657.20
bone (os femoris), neonate N20.CNhs11195.1350-25C347.03
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B275.24
cerebellum, neonate N30.CNhs11135.1395-42I272.47
colon, adult.CNhs10468.36-18H763.61
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D427.19
corpora quadrigemina, adult.CNhs10501.16-22A4114.59
corpus striatum, adult.CNhs10487.19-21D8104.77
corpus striatum, neonate N00.CNhs11226.630-43F1115.10
cortex, adult.CNhs10473.12-14D5115.25
cortex, neonate N30.CNhs11107.1392-42F2151.64
diencephalon, adult.CNhs10482.20-12F2105.76
diencephalon, neonate N30.CNhs11201.1388-42B297.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B143.69
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A249.76
epididymis, adult.CNhs10490.58-23B245.24
eyeball, adult.CNhs10484.31-12G459.77
eyeball, embryo E12.CNhs11016.345-16C636.17
eyeball, embryo E14.CNhs10521.399-16E238.62
eyeball, embryo E15.CNhs10593.426-16C944.84
eyeball, embryo E17.CNhs11023.1261-18D437.53
eyeball, neonate N00.CNhs11207.633-15C649.94
eyeball, neonate N01.CNhs11140.1532-43E738.95
eyeball, neonate N02.CNhs11205.1551-44G853.69
eyeball, neonate N16.CNhs11188.777-19A240.62
forelimb, embryo E11.CNhs10596.335-25E257.56
forelimb, embryo E12.CNhs10600.359-14H249.92
forelimb, embryo E13.CNhs10589.384-1E247.86
forelimb, embryo E14.CNhs10577.413-26A837.92
forelimb, embryo E15.CNhs11007.437-20E735.87
forelimb, embryo E17.CNhs10598.1517-43C440.40
forelimb, embryo E18.CNhs11008.1520-43B536.63
gonad, embryo E13.CNhs11044.1564-45I630.05
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C831.60
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.82
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.97
heart, embryo E11.CNhs10586.331-24E937.70
heart, embryo E12.CNhs11015.353-12F529.78
heart, embryo E13.CNhs11013.376-3I932.95
heart, embryo E14.CNhs10597.403-26D440.96
heart, embryo E15.CNhs11017.431-16C836.99
heart, embryo E16.CNhs11021.457-17C635.48
heart, embryo E17.CNhs11025.479-18E538.83
heart, embryo E18.CNhs11030.1283-20G334.07
heart, neonate N00.CNhs11213.639-21E347.17
heart, neonate N03.CNhs11221.1349-25I244.43
heart, neonate N10.CNhs11118.749-24G139.40
heart, neonate N16.CNhs11209.782-15G160.07
heart, neonate N20.CNhs11127.821-26I648.10
heart, neonate N25.CNhs11196.1351-25D346.11
heart, neonate N30.CNhs11202.1390-42D264.82
hippocampus, adult.CNhs10478.13-16E8118.60
hippocampus, neonate N00.CNhs11228.627-43G191.48
intestinal mucosa, adult.CNhs10506.860-29I3134.15
intestine, adult.CNhs10496.178-9A396.26
intestine, embryo E12.CNhs11019.1251-16I536.47
intestine, embryo E13.CNhs11010.381-16D534.37
intestine, embryo E15.CNhs10602.976-16D842.91
intestine, embryo E16.CNhs10585.463-22H440.94
intestine, embryo E17.CNhs10582.482-18D340.25
intestine, embryo E18.CNhs10526.1289-20F747.37
intestine, neonate N00.CNhs11126.644-26D173.55
intestine, neonate N01.CNhs11192.1322-23E949.24
intestine, neonate N06.CNhs11102.688-20B841.97
intestine, neonate N07.CNhs11095.720-20F247.35
intestine, neonate N10.CNhs11098.755-23A544.65
intestine, neonate N20.CNhs11187.827-18D174.60
intestine, neonate N25.CNhs11121.1352-25E354.90
intestine, neonate N30.CNhs11131.1384-42G161.14
kidney, embryo E14.CNhs10606.411-4I943.81
kidney, embryo E15.CNhs10997.434-16F831.76
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I231.36
kidney, embryo E18.CNhs11001.1288-20C731.81
kidney, neonate N00.CNhs11214.646-21G737.45
kidney, neonate N10.CNhs11206.758-6D540.03
kidney, neonate N20.CNhs11113.832-19I136.90
kidney, neonate N25.CNhs11122.1353-25F334.23
kidney, neonate N30.CNhs11203.1385-42H147.26
liver, adult pregnant day01.CNhs10466.508-5B241.80
liver, embryo E12.CNhs10601.355-15F842.88
liver, embryo E13.CNhs10524.378-3H651.50
liver, embryo E14.CNhs10594.409-16E153.97
liver, embryo E15.CNhs10520.433-16D753.15
liver, embryo E16.CNhs10523.462-17F557.88
liver, embryo E17.CNhs10510.481-18A343.54
liver, embryo E18.CNhs10579.499-43G434.52
liver, neonate N00.CNhs11117.641-24F433.08
liver, neonate N03.CNhs11123.1345-25G234.05
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H232.00
liver, neonate N10.CNhs11115.751-24B929.33
liver, neonate N20.CNhs11220.823-25A334.10
liver, neonate N25.CNhs11198.1368-26H129.60
liver, neonate N30.CNhs11106.1382-42D146.31
lung, adult.CNhs10474.28-22B143.05
lung, embryo E12.CNhs10522.354-16G235.81
lung, embryo E14.CNhs10604.404-26F846.93
lung, embryo E15.CNhs11020.432-17C534.63
lung, embryo E16.CNhs10998.458-17B632.62
lung, embryo E17.CNhs10605.480-44A644.05
lung, embryo E18.CNhs10583.1287-20I633.09
lung, neonate N00.CNhs11224.640-42C654.05
lung, neonate N06.CNhs11212.683-20E543.51
lung, neonate N07.CNhs11111.715-19A333.88
lung, neonate N10.CNhs11219.750-23E648.95
lung, neonate N20.CNhs11109.822-18A438.51
lung, neonate N25.CNhs11119.1359-25C748.87
lung, neonate N30.CNhs11133.1394-42H245.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.56
mammary gland, adult lactating day02.CNhs10480.595-22B632.46
mammary gland, adult pregnant day19.CNhs10476.588-5H237.25
medulla oblongata, adult.CNhs10477.17-12C2106.28
medulla oblongata, neonate N30.CNhs11200.1396-42A3104.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C737.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C266.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D729.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D832.75
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D535.36
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D634.39
olfactory brain, adult.CNhs10489.18-22I988.04
ovary, adult.CNhs10507.91-2I747.69
ovary, embryo E18.CNhs11040.505-44H750.93
ovary, neonate N00.CNhs11217.1299-22I445.77
oviduct, adult pregnant day01.CNhs10500.988-6G639.10
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F433.50
pancreas, embryo E15.CNhs11042.1556-45F238.70
pancreas, embryo E16.CNhs11003.460-26E526.78
pancreas, embryo E17.CNhs10599.1558-45G345.18
pancreas, embryo E18.CNhs10580.1535-43I745.19
pancreas, neonate N00.CNhs11105.645-26G941.09
pancreas, neonate N01.CNhs11138.1531-43D735.26
pancreas, neonate N02.CNhs11139.1539-43D834.58
pancreas, neonate N16.CNhs11136.787-43B635.08
pancreas, neonate N25.CNhs11094.1555-45E247.44
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G846.98
pituitary gland, embryo E12.CNhs11018.346-16E639.43
pituitary gland, embryo E13.CNhs11009.370-44C749.93
pituitary gland, embryo E14.CNhs11037.398-44A543.30
pituitary gland, embryo E15.CNhs10592.427-16B937.42
pituitary gland, embryo E16.CNhs11036.449-43F642.10
pituitary gland, embryo E17.CNhs11039.1265-44F538.34
pituitary gland, neonate N00.CNhs11190.1308-22E960.59
placenta, adult pregnant day10.CNhs10472.539-13I730.98
placenta, adult pregnant day17.CNhs10464.577-18G333.68
prostate, adult.CNhs10470.859-1F832.86
skin, adult.CNhs10492.30-1C345.84
skin, neonate N00.CNhs11124.650-25G432.45
skin, neonate N03.CNhs11215.662-22H344.87
skin, neonate N06.CNhs11097.693-20I546.44
skin, neonate N10.CNhs11108.762-6C446.12
small intestine, neonate N16.CNhs11114.790-21I156.84
spinal cord, adult.CNhs10505.24-13C9107.55
spleen, adult.CNhs10465.25-2G251.43
spleen, embryo E16.CNhs11035.461-43C139.42
spleen, embryo E18.CNhs11011.1271-21F236.85
spleen, neonate N10.CNhs11116.752-24D147.47
spleen, neonate N20.CNhs11112.824-19H149.62
spleen, neonate N25.CNhs11099.1354-25G359.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.78
stomach, adult.CNhs10503.33-1H654.42
stomach, embryo E12.CNhs10588.356-43E346.50
stomach, embryo E15.CNhs10603.1252-16G846.76
stomach, embryo E16.CNhs11022.459-17D433.16
stomach, embryo E17.CNhs11006.1035-18D533.45
stomach, embryo E18.CNhs10999.1286-20C640.18
stomach, neonate N03.CNhs11193.1340-24B835.20
stomach, neonate N07.CNhs11210.718-18A937.28
stomach, neonate N25.CNhs11104.1355-25E444.50
stomach, neonate N30.CNhs11134.1386-42I153.53
submandibular gland, adult.CNhs10469.59-29C137.90
testis, adult.CNhs10504.57-7G578.35
testis, embryo E13.CNhs11031.389-23F538.72
testis, embryo E15.CNhs11034.443-27C538.06
testis, embryo E16.CNhs11033.470-26G539.28
testis, embryo E17.CNhs11029.486-18I534.23
testis, embryo E18.CNhs11027.503-18G538.18
testis, neonate N00.CNhs11189.1300-22B738.14
testis, neonate N07.CNhs11222.726-26I442.71
testis, neonate N10.CNhs11204.763-44D938.17
testis, neonate N20.CNhs11110.839-18H360.64
testis, neonate N30.CNhs11130.1391-42E275.46
thymus, adult.CNhs10471.38-12B560.99
thymus, embryo E14.CNhs11041.402-44I453.32
thymus, embryo E15.CNhs11005.430-45I249.30
thymus, embryo E16.CNhs11002.456-26C554.70
thymus, embryo E17.CNhs10581.478-18C181.28
thymus, embryo E18.CNhs10595.1273-19G476.09
thymus, neonate N02.CNhs11181.1541-43F870.80
thymus, neonate N03.CNhs11137.2104-43C761.29
thymus, neonate N06.CNhs11197.681-26C457.75
thymus, neonate N07.CNhs11211.713-19D370.03
thymus, neonate N10.CNhs11194.748-24E465.74
thymus, neonate N20.CNhs11186.820-7A262.37
thymus, neonate N25.CNhs11125.1362-25G770.62
thymus, neonate N30.CNhs11132.1393-42G267.55
tongue, adult.CNhs10499.32-1B459.18
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H334.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F717.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.48
urinary bladder, adult.CNhs10481.879-12E449.46
uterus, adult pregnant day19.CNhs10497.590-15F537.16
uterus, adult.CNhs10509.92-27E543.41
vagina, adult.CNhs10502.89-27D555.31
vesicular gland, adult.CNhs10491.51-27F842.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A183.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A268.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A371.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D769.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A469.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A670.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A777.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A868.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A982.84
whole body, embryo E11.CNhs11014.324-5I851.37
whole body, embryo E12.CNhs10587.857-27C950.68
whole body, embryo E13.CNhs10512.372-23H239.78
whole body, embryo E14.5.CNhs10578.420-27D241.81
whole body, embryo E14.CNhs10519.395-14B152.19
whole body, embryo E16.CNhs10514.453-14F252.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G545.95
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G546.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G542.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.68
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G547.35
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G545.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G556.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G558.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G549.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G553.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.98
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G540.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G548.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G550.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G545.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.28
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G553.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G554.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G550.66
whole body, embryo E17.5.CNhs10513.490-9F936.27
whole body, embryo E17.CNhs10517.475-3I567.20
whole body, embryo E18.CNhs10516.493-3B343.75
whole body, neonate N00.CNhs10525.657-19C248.99
whole body, neonate N01.CNhs10576.659-23C639.60
whole body, neonate N06.CNhs10515.692-21D151.84
whole body, neonate N10.CNhs10518.761-6B439.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.41e-1023
neuroblast (sensu Vertebrata)1.41e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.14e-1854
neural tube1.11e-1752
neural rod1.11e-1752
future spinal cord1.11e-1752
neural keel1.11e-1752
brain1.85e-1547
future brain1.85e-1547
gray matter5.11e-1534
regional part of brain6.76e-1546
neurectoderm1.89e-1364
neural plate1.89e-1364
presumptive neural plate1.89e-1364
central nervous system3.41e-1373
brain grey matter5.73e-1329
regional part of telencephalon5.73e-1329
telencephalon5.73e-1329
nervous system1.01e-1275
anterior neural tube2.60e-1240
regional part of forebrain1.03e-1139
forebrain1.03e-1139
future forebrain1.03e-1139
ecto-epithelium3.94e-1173
pre-chordal neural plate2.60e-1049
ectoderm-derived structure9.49e-1095
ectoderm9.49e-1095
presumptive ectoderm9.49e-1095
cerebral cortex6.43e-0921
cerebral hemisphere6.43e-0921
pallium6.43e-0921
organ system subdivision9.69e-08194
structure with developmental contribution from neural crest1.55e-0792
regional part of cerebral cortex3.04e-0717
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