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FFCP PHASE1:Mm9::chr7:31077164..31077188,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76686
|EntrezGene=76686
|HGNC=
|HGNC=
|MCL_coexpression_id=42
|TSSclassifier=NA
|UniProt=D3Z2W8
|UniProt=D3Z2W8
|association_with_transcript=187bp_to_ENSMUST00000144508_5end
|association_with_transcript=187bp_to_ENSMUST00000144508_5end
|cluster_id=chr7:31077164..31077188,+
|description=CAGE_peak_6_at_Clip3_5end
|description=CAGE_peak_6_at_Clip3_5end
|id=chr7:31077164..31077188,+
|id=chr7:31077164..31077188,+
|ontology_enrichment_celltype=CL:0000055!8.38e-18!50;CL:0002319!1.08e-17!43;CL:0000221!7.43e-17!44;CL:0000133!7.43e-17!44;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!9.24e-16!33;CL:0000047!9.24e-16!33;CL:0000031!9.24e-16!33;CL:0000404!9.24e-16!33;CL:0000117!9.68e-11!23;CL:0000337!9.68e-11!23;CL:0002321!1.98e-07!70;CL:0000220!1.98e-07!70;CL:0000107!2.25e-07!9
|ontology_enrichment_celltype=CL:0000055!8.38e-18!50;CL:0002319!1.08e-17!43;CL:0000221!7.43e-17!44;CL:0000133!7.43e-17!44;CL:0000393!1.73e-16!39;CL:0000211!1.73e-16!39;CL:0000540!9.24e-16!33;CL:0000047!9.24e-16!33;CL:0000031!9.24e-16!33;CL:0000404!9.24e-16!33;CL:0000117!9.68e-11!23;CL:0000337!9.68e-11!23;CL:0002321!1.98e-07!70;CL:0000220!1.98e-07!70;CL:0000107!2.25e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002319,3.67e-29,43;CL:0000221,2.57e-28,44;CL:0000133,2.57e-28,44;CL:0000540,3.32e-26,33;CL:0000047,3.32e-26,33;CL:0000031,3.32e-26,33;CL:0000404,3.32e-26,33;CL:0000393,6.03e-23,39;CL:0000211,6.03e-23,39;CL:0002321,5.01e-16,70;CL:0000117,5.78e-16,23;CL:0000337,5.78e-16,23;CL:0000107,7.62e-13,9;CL:0000723,7.14e-08,91;CL:0000048,7.14e-08,91;CL:0000034,5.57e-07,97;CL:0002609,9.02e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.48e-27!73;UBERON:0005743!4.48e-27!73;UBERON:0000073!3.47e-26!75;UBERON:0001016!3.47e-26!75;UBERON:0004121!4.74e-26!102;UBERON:0000924!4.74e-26!102;UBERON:0006601!4.74e-26!102;UBERON:0002346!5.17e-21!71;UBERON:0003075!5.17e-21!71;UBERON:0007284!5.17e-21!71;UBERON:0001049!2.35e-16!52;UBERON:0005068!2.35e-16!52;UBERON:0006241!2.35e-16!52;UBERON:0007135!2.35e-16!52;UBERON:0000033!4.35e-16!63;UBERON:0000955!1.01e-15!50;UBERON:0006238!1.01e-15!50;UBERON:0002616!2.14e-15!49;UBERON:0003056!3.92e-12!49;UBERON:0003080!5.30e-10!40;UBERON:0002020!7.23e-10!34;UBERON:0002780!1.59e-09!39;UBERON:0001890!1.59e-09!39;UBERON:0006240!1.59e-09!39;UBERON:0003076!7.13e-08!12;UBERON:0003057!7.13e-08!12;UBERON:0002791!1.21e-07!29;UBERON:0003528!1.21e-07!29;UBERON:0001893!1.21e-07!29;UBERON:0002410!2.25e-07!9;UBERON:0000153!2.61e-07!94;UBERON:0007811!7.97e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.41e-31,73;UBERON:0001016,4.33e-30,75;UBERON:0004121,2.53e-24,95;UBERON:0000924,2.53e-24,95;UBERON:0006601,2.53e-24,95;UBERON:0000073,2.35e-20,54;UBERON:0002346,3.20e-17,64;UBERON:0003075,3.20e-17,64;UBERON:0007284,3.20e-17,64;UBERON:0001049,3.46e-16,52;UBERON:0005068,3.46e-16,52;UBERON:0006241,3.46e-16,52;UBERON:0007135,3.46e-16,52;UBERON:0010371,2.77e-15,73;UBERON:0002616,2.34e-14,46;UBERON:0000955,6.33e-14,47;UBERON:0006238,6.33e-14,47;UBERON:0002410,7.62e-13,9;UBERON:0002020,6.43e-12,34;UBERON:0010314,1.75e-10,92;UBERON:0000010,3.37e-10,11;UBERON:0003528,8.96e-10,29;UBERON:0002791,8.96e-10,29;UBERON:0001893,8.96e-10,29;UBERON:0003080,1.55e-09,40;UBERON:0002780,1.01e-08,39;UBERON:0001890,1.01e-08,39;UBERON:0006240,1.01e-08,39;UBERON:0003076,2.21e-08,12;UBERON:0003057,2.21e-08,12;UBERON:0003056,5.79e-08,49;UBERON:0002037,7.26e-08,4;UBERON:0002680,7.26e-08,4;UBERON:0001895,7.26e-08,4;UBERON:0010092,7.26e-08,4;UBERON:0006215,7.26e-08,4;UBERON:0004733,1.31e-07,6;UBERON:0004732,1.31e-07,6;UBERON:0002028,1.31e-07,6;UBERON:0007277,1.31e-07,6;UBERON:0000956,2.01e-07,21;UBERON:0001869,2.01e-07,21;UBERON:0000203,2.01e-07,21
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0,3.12956537739216,1.09012578190223,1.31811709640683,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0.899899717281399,0,0.7104801149461,2.69640099466564,5.37905627450176,1.8664130215526,1.35005938331691,1.68259969081106,0.856952953211411,1.32521124570968,1.34739879136449,1.0543001812006,0,2.20231761998777,1.53224805702225,2.30409799884365,0.791317726381163,1.9212405156506,2.08365348222704,1.3959149950069,0,1.37518422999129,1.17851434189467,2.13557521198654,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,1.75668478206928,29.5319856606972,0.510914110417183,0,0,0,1.19832511523858,0,0.753926112677186,0,1.02286182932132,2.28566849015516,0.486723789203273,0.611036183101898,0.124406970610093,0.252722758433675,0.210441855886474,0.910843100738926,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.384341160854549,0.374806898238915,1.29351685369508,1.94011193639558,1.70195472151037,0.879755620819744,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.26173969138476,1.02904612379284,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0.597423819763102,1.70701110857774,0.114248512609729,0,0,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.44292937929755,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,1.40654023910644,0.655739781506702,0,1.26203287766503,3.12350995437311,1.93881057959519,1.91175038362042,2.00518806674155,4.52922449262132,2.83367491172426,2.04579100537918,0.790575555893047,0.642642632843614,0.425820255624806,0.35613120733451,0.977321756121456,0.824850614862677,0,0,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0.354680467284547,1.60531935841864,0.658196082408484,0,0,0,0.220528398054962,0.8244312647074,1.13025098687134,0.301564624640779,0,0,0.582961673259701,0.927126510052548,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0,0,0,0,1.26534397432454,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.772758376128762,0,1.09890974560359,0.857473516316263,0,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0.685082519770642,0,0.675022500231806,0,2.26571204492102,2.5888015587591,0.103787347584177,1.99512436700516,0.170733605754134,0,0.628839487883947,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.441596760403192,0,0,0,0.436039249896986,0.0941093804153306,0,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.701794825336225,1.28922632428979,1.91288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0,3.12956537739216,1.09012578190223,1.31811709640683,0.388859798148567,0.699932108126813,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0.899899717281399,0,0.7104801149461,2.69640099466564,5.37905627450176,1.8664130215526,1.35005938331691,1.68259969081106,0.856952953211411,1.32521124570968,1.34739879136449,1.0543001812006,0,2.20231761998777,1.53224805702225,2.30409799884365,0.791317726381163,1.9212405156506,2.08365348222704,1.3959149950069,0,1.37518422999129,1.17851434189467,2.13557521198654,0.559198337475902,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0.346970653532272,0,0.461230994512117,0.150722640552623,0.940709657085638,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,1.75668478206928,29.5319856606972,0.510914110417183,0,0,0,1.19832511523858,0,0.753926112677186,0,1.02286182932132,2.28566849015516,0.486723789203273,0.611036183101898,0.124406970610093,0.252722758433675,0.210441855886474,0.910843100738926,0.459804208866946,0.900310649026746,0.30140963567143,0.408218994907967,0.384341160854549,0.374806898238915,1.29351685369508,1.94011193639558,1.70195472151037,0.879755620819744,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,1.26173969138476,1.02904612379284,0,0,0.213288250535234,0,0.257734922644187,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0.597423819763102,1.70701110857774,0.114248512609729,0,0,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0.486405680325106,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.44292937929755,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,1.40654023910644,0.655739781506702,0,1.26203287766503,3.12350995437311,1.93881057959519,1.91175038362042,2.00518806674155,4.52922449262132,2.83367491172426,2.04579100537918,0.790575555893047,0.642642632843614,0.425820255624806,0.35613120733451,0.977321756121456,0.824850614862677,0,0,0,0,0,0,0,0,0.356497378384721,0,0,1.03135543248187,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0.354680467284547,1.60531935841864,0.658196082408484,0,0,0,0.220528398054962,0.8244312647074,1.13025098687134,0.301564624640779,0,0,0.582961673259701,0.927126510052548,0,0.619160603889667,0.185194527369712,0,0.136694227721025,0,0,0,0,0,1.26534397432454,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.772758376128762,0,1.09890974560359,0.857473516316263,0,0.564751842617067,0.460325236507177,1.14579102687879,0.859265911718438,0.685082519770642,0,0.675022500231806,0,2.26571204492102,2.5888015587591,0.103787347584177,1.99512436700516,0.170733605754134,0,0.628839487883947,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.114870937911227,0,0,0.192909220463705,0,0.441596760403192,0,0,0,0.436039249896986,0.0941093804153306,0,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.749431733813838,0.701794825336225,1.28922632428979,1.91288332068843,0.441182838239031,0.231867835620421
|short_description=p6@Clip3
|short_description=p6@Clip3
}}
}}

Latest revision as of 14:23, 26 September 2015

Short description:p6@Clip3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Clip3_5end
Coexpression cluster:MCL_coexpression_mm9:42
Association with transcript: 187bp_to_ENSMUST00000144508_5end
EntrezGene:Clip3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Clip3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I229.53
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.41e-3173
nervous system4.33e-3075
ectoderm-derived structure2.53e-2495
ectoderm2.53e-2495
presumptive ectoderm2.53e-2495
regional part of nervous system2.35e-2054
neurectoderm3.20e-1764
neural plate3.20e-1764
presumptive neural plate3.20e-1764
neural tube3.46e-1652
neural rod3.46e-1652
future spinal cord3.46e-1652
neural keel3.46e-1652
ecto-epithelium2.77e-1573
regional part of brain2.34e-1446
brain6.33e-1447
future brain6.33e-1447
autonomic nervous system7.62e-139
gray matter6.43e-1234
structure with developmental contribution from neural crest1.75e-1092
peripheral nervous system3.37e-1011
brain grey matter8.96e-1029
regional part of telencephalon8.96e-1029
telencephalon8.96e-1029
anterior neural tube1.55e-0940
regional part of forebrain1.01e-0839
forebrain1.01e-0839
future forebrain1.01e-0839
posterior neural tube2.21e-0812
chordal neural plate2.21e-0812
pre-chordal neural plate5.79e-0849
cerebellum7.26e-084
regional part of metencephalon7.26e-084
metencephalon7.26e-084
future metencephalon7.26e-084
rhombic lip7.26e-084
segmental subdivision of hindbrain1.31e-076
segmental subdivision of nervous system1.31e-076
hindbrain1.31e-076
presumptive hindbrain1.31e-076
cerebral cortex2.01e-0721
cerebral hemisphere2.01e-0721
pallium2.01e-0721
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