FFCP PHASE1:Mm9::chr2:103637774..103637819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53872 | |EntrezGene=53872 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60865 | |UniProt=Q60865 | ||
|association_with_transcript=0bp_to_ENSMUST00000028607,NM_001111291,NM_016739,uc008ljd.2,uc012cai.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028607,NM_001111291,NM_016739,uc008ljd.2,uc012cai.1_5end | ||
|cluster_id=chr2:103637774..103637819,- | |||
|description=CAGE_peak_3_at_Caprin1_5end | |description=CAGE_peak_3_at_Caprin1_5end | ||
|id=chr2:103637774..103637819,- | |id=chr2:103637774..103637819,- | ||
|ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23 | |ontology_enrichment_celltype=CL:0000117!4.77e-07!23;CL:0000337!4.77e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.77e-07,23;CL:0000337,4.77e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.22e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0002346!6.48e-13!71;UBERON:0003075!6.48e-13!71;UBERON:0007284!6.48e-13!71;UBERON:0000153!7.19e-13!94;UBERON:0000955!1.34e-12!50;UBERON:0006238!1.34e-12!50;UBERON:0003080!2.23e-12!40;UBERON:0000033!2.83e-12!63;UBERON:0002616!3.17e-12!49;UBERON:0002020!6.86e-12!34;UBERON:0002780!7.81e-12!39;UBERON:0001890!7.81e-12!39;UBERON:0006240!7.81e-12!39;UBERON:0007811!2.68e-11!86;UBERON:0002791!1.70e-10!29;UBERON:0003528!1.70e-10!29;UBERON:0001893!1.70e-10!29;UBERON:0001017!2.74e-10!73;UBERON:0005743!2.74e-10!73;UBERON:0000073!3.87e-09!75;UBERON:0001016!3.87e-09!75;UBERON:0000468!2.94e-08!333;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0000922!1.71e-07!328;UBERON:0002619!3.04e-07!17 | |ontology_enrichment_uberon=UBERON:0003056!2.22e-13!49;UBERON:0001049!2.51e-13!52;UBERON:0005068!2.51e-13!52;UBERON:0006241!2.51e-13!52;UBERON:0007135!2.51e-13!52;UBERON:0002346!6.48e-13!71;UBERON:0003075!6.48e-13!71;UBERON:0007284!6.48e-13!71;UBERON:0000153!7.19e-13!94;UBERON:0000955!1.34e-12!50;UBERON:0006238!1.34e-12!50;UBERON:0003080!2.23e-12!40;UBERON:0000033!2.83e-12!63;UBERON:0002616!3.17e-12!49;UBERON:0002020!6.86e-12!34;UBERON:0002780!7.81e-12!39;UBERON:0001890!7.81e-12!39;UBERON:0006240!7.81e-12!39;UBERON:0007811!2.68e-11!86;UBERON:0002791!1.70e-10!29;UBERON:0003528!1.70e-10!29;UBERON:0001893!1.70e-10!29;UBERON:0001017!2.74e-10!73;UBERON:0005743!2.74e-10!73;UBERON:0000073!3.87e-09!75;UBERON:0001016!3.87e-09!75;UBERON:0000468!2.94e-08!333;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0004121!1.70e-07!102;UBERON:0000924!1.70e-07!102;UBERON:0006601!1.70e-07!102;UBERON:0000922!1.71e-07!328;UBERON:0002619!3.04e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.33e-14,64;UBERON:0003075,4.33e-14,64;UBERON:0007284,4.33e-14,64;UBERON:0000073,1.01e-13,54;UBERON:0003056,2.22e-13,49;UBERON:0001049,2.51e-13,52;UBERON:0005068,2.51e-13,52;UBERON:0006241,2.51e-13,52;UBERON:0007135,2.51e-13,52;UBERON:0003080,2.23e-12,40;UBERON:0000955,5.15e-12,47;UBERON:0006238,5.15e-12,47;UBERON:0002020,6.86e-12,34;UBERON:0002780,7.81e-12,39;UBERON:0001890,7.81e-12,39;UBERON:0006240,7.81e-12,39;UBERON:0002616,1.21e-11,46;UBERON:0010371,4.77e-11,73;UBERON:0003528,1.70e-10,29;UBERON:0002791,1.70e-10,29;UBERON:0001893,1.70e-10,29;UBERON:0001017,2.74e-10,73;UBERON:0001016,3.87e-09,75;UBERON:0000922,1.69e-08,320;UBERON:0000956,4.19e-08,21;UBERON:0001869,4.19e-08,21;UBERON:0000203,4.19e-08,21;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0004121,6.46e-08,95;UBERON:0000924,6.46e-08,95;UBERON:0006601,6.46e-08,95;UBERON:0002619,3.04e-07,17;UBERON:0010314,4.52e-07,92 | |||
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|phase1_expression=37.1545325283122,22.6834014965585,20.4749657725291,41.1351327377289,32.0573267165662,28.875234768845,22.660426137766,25.3081713945489,17.1762241025033,13.3416780003536,23.4568616468942,19.0655459998854,29.104124088305,23.4286678482913,59.6266473650036,41.1024792801347,42.6732745658169,30.2843678743908,30.7136331276855,33.5267824920444,32.3164502574065,38.5248890659435,39.9635677382571,24.6388331101846,25.2350209173887,14.3557991028755,17.230479846363,19.39241094173,29.6436534351943,44.3573028377478,21.2861290229093,35.5617177137393,33.8285633171514,15.8481681015439,42.7500397231886,39.2313763046042,36.7504841272264,29.2972141515835,21.8773896466664,43.4524707498253,28.8233429135197,29.3709558532132,35.9277661243054,46.9595131048903,38.7259877258546,38.1777244496298,15.6478268869608,15.9158364157726,14.0599156950062,22.3594383935426,25.6175151574413,15.8127820801469,27.8519126055842,31.9159342484992,34.6176613116738,24.439646423415,24.6418758347331,30.9403255366465,60.0879888753005,60.8339626162838,63.3831403506179,18.2976047317331,15.1180115338894,9.89889689009539,11.8663963508037,11.3676818391376,11.3848041996994,13.4476406862544,55.3702529727271,46.5770487244333,47.7437662267637,47.1324124266276,41.744154239855,59.4080376192527,51.8523998208659,68.9414089957516,51.7544640697127,47.2443150915195,54.0694997061977,61.3271237945401,61.7541594316265,63.030517837368,47.4611098302348,42.207195752376,45.3810795897126,69.5323461717856,64.3519997211945,69.7133927386624,18.098560206631,26.072188236841,31.3053647797812,19.7897491705719,11.5595126730318,29.6836755400799,41.5856907166508,30.9138552097162,29.2124393874044,40.5624167735777,28.8362465109184,28.9738451098479,31.1263957706464,39.7812079984385,20.3844191765317,21.3320010945999,26.4119070033681,25.0826266820348,31.3425155909166,32.0856702010559,59.8146511224967,33.2510391505207,45.2796702859615,49.627872964879,37.3597105554815,37.0777695759451,38.9218620619183,43.354974008738,27.4386414185155,33.6916501623394,36.2690326299448,39.147577687273,40.8556809151728,37.3353944914121,59.6453635897991,60.8984057784018,48.5916359807216,50.8359539865097,39.8984364604715,32.9946502046374,34.1818910826544,68.3045315685992,91.0426199609067,88.7119725916823,75.6135792836403,66.4860189058859,57.3495002984386,59.2180610197315,43.2817296363844,34.9583587414361,35.6339089391481,39.1421851948842,69.7445574280092,47.3598335132954,57.4398194079064,40.8410056334788,51.9118488524632,52.3985115965036,42.3531795009974,54.5864112259323,64.6703978798527,66.5653402190724,58.0638709741031,51.0726056556249,51.16069385751,38.6559904839605,33.1309239616789,56.5257317764521,43.5372176134206,34.2272716462571,35.8046009238447,49.503059635985,56.051728335482,45.7357636110978,42.1405629341674,40.5334317399652,37.7954426574077,35.345159602062,27.6321603441608,33.9787146288463,34.2284487820039,31.1918181750281,31.0493540560627,26.9007976862611,32.7129671783665,32.3437469212496,75.0735116373934,63.0805273885014,35.3548097792664,56.3279706993349,68.0389519207396,57.5946946213888,49.3562376863617,48.8074129588489,48.2560355143369,42.0398633708756,48.8764933390847,49.9037832813753,43.7323263312469,37.2048602716952,41.7223146434917,49.4350674759822,50.5763036706784,40.2265371973822,37.5542443887102,56.3245167165963,63.116331976925,56.6150691409974,45.9667394587273,43.6244799717781,44.5817586726014,46.3495864655951,43.1746501563781,40.5976669302724,23.7162101669719,56.5604908377559,56.4124315974893,53.0674585228255,53.9607922893418,44.3765973944447,36.1568709529616,34.2358403566465,42.8036998686093,37.3403521935791,44.5681440234799,41.3076451912039,47.4297263134132,42.4332514951148,44.3111611399123,28.4641677604387,33.8098338004887,58.9318290606208,48.7265279561657,49.0563297890294,33.0913250086788,29.4811013097596,25.7087132156895,25.172240573656,46.9752729436449,36.9846031713454,38.7475087837694,28.0206268163912,32.8101465545202,25.458234310346,18.0949540727127,25.5635671394793,24.5882136509518,32.5605360639584,59.7248194754586,53.2141057128602,30.819769730815,26.2569764292548,42.5936096211947,43.3387006169269,39.4224817851022,36.801194884693,31.8602103937824,45.8583979877909,39.2666380624648,41.5003318234063,34.7853244592941,57.5165156395035,49.8209699081023,38.9963672031289,48.5403138873657,45.0368435715022,23.8941249011933,50.9839335925461,36.8834739496996,34.8919397548412,24.5100571091041,29.2063390546731,30.4945385938501,33.4451031119305,33.5107535681638,30.97160227771,33.7339547439996,33.0033738394198,50.0446220458068,61.4008330646768,44.240669853702,52.2982365477085,57.1035552328121,52.975538827815,46.5673728304002,30.4464949114599,56.5558816433542,36.0114520468494,35.7256004849038,37.099406911833,36.1680315798828,40.7715372514334,35.8117032009409,48.4215654247931,48.0943380439254,50.8065327508797,55.0204236169086,40.6582129887548,39.4464343297486,49.352535735229,54.9510795438521,41.1800711771741,33.1457938488018,37.227086318093,28.4691946037113,13.3653886522116,67.221398635991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| ||
|short_description=p3@Caprin1 | |short_description=p3@Caprin1 | ||
}} | }} |
Latest revision as of 21:51, 1 October 2015
Short description: | p3@Caprin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Caprin1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028607, NM_001111291, NM_016739, uc008ljd.2, uc012cai.1_5end |
EntrezGene: | Caprin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.77e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.77e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.33e-14 | 64 |
neural plate | 4.33e-14 | 64 |
presumptive neural plate | 4.33e-14 | 64 |
regional part of nervous system | 1.01e-13 | 54 |
pre-chordal neural plate | 2.22e-13 | 49 |
neural tube | 2.51e-13 | 52 |
neural rod | 2.51e-13 | 52 |
future spinal cord | 2.51e-13 | 52 |
neural keel | 2.51e-13 | 52 |
anterior neural tube | 2.23e-12 | 40 |
brain | 5.15e-12 | 47 |
future brain | 5.15e-12 | 47 |
gray matter | 6.86e-12 | 34 |
regional part of forebrain | 7.81e-12 | 39 |
forebrain | 7.81e-12 | 39 |
future forebrain | 7.81e-12 | 39 |
regional part of brain | 1.21e-11 | 46 |
ecto-epithelium | 4.77e-11 | 73 |
brain grey matter | 1.70e-10 | 29 |
regional part of telencephalon | 1.70e-10 | 29 |
telencephalon | 1.70e-10 | 29 |
central nervous system | 2.74e-10 | 73 |
nervous system | 3.87e-09 | 75 |
embryo | 1.69e-08 | 320 |
cerebral cortex | 4.19e-08 | 21 |
cerebral hemisphere | 4.19e-08 | 21 |
pallium | 4.19e-08 | 21 |
occipital lobe | 6.12e-08 | 10 |
visual cortex | 6.12e-08 | 10 |
neocortex | 6.12e-08 | 10 |
ectoderm-derived structure | 6.46e-08 | 95 |
ectoderm | 6.46e-08 | 95 |
presumptive ectoderm | 6.46e-08 | 95 |
regional part of cerebral cortex | 3.04e-07 | 17 |
structure with developmental contribution from neural crest | 4.52e-07 | 92 |