FFCP PHASE1:Mm9::chr9:95307722..95307752,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54371 | |EntrezGene=54371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=23 | |||
|TSSclassifier=NA | |||
|UniProt=Q80WV3 | |UniProt=Q80WV3 | ||
|association_with_transcript=-33bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | |association_with_transcript=-33bp_to_ENSMUST00000036267,NM_018763,uc009raz.2_5end | ||
|cluster_id=chr9:95307722..95307752,- | |||
|description=CAGE_peak_2_at_Chst2_5end | |description=CAGE_peak_2_at_Chst2_5end | ||
|id=chr9:95307722..95307752,- | |id=chr9:95307722..95307752,- | ||
|ontology_enrichment_celltype=CL:0000221!3.27e-09!44;CL:0000133!3.27e-09!44;CL:0002319!9.91e-09!43;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!6.03e-07!50 | |ontology_enrichment_celltype=CL:0000221!3.27e-09!44;CL:0000133!3.27e-09!44;CL:0002319!9.91e-09!43;CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000055!6.03e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.66e-09,23;CL:0000337,7.66e-09,23;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0002319,3.27e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.79e-18!75;UBERON:0001016!4.79e-18!75;UBERON:0001017!6.53e-18!73;UBERON:0005743!6.53e-18!73;UBERON:0001049!7.14e-17!52;UBERON:0005068!7.14e-17!52;UBERON:0006241!7.14e-17!52;UBERON:0007135!7.14e-17!52;UBERON:0002346!1.21e-15!71;UBERON:0003075!1.21e-15!71;UBERON:0007284!1.21e-15!71;UBERON:0000955!2.43e-15!50;UBERON:0006238!2.43e-15!50;UBERON:0002616!5.10e-15!49;UBERON:0004121!5.53e-15!102;UBERON:0000924!5.53e-15!102;UBERON:0006601!5.53e-15!102;UBERON:0002020!3.49e-13!34;UBERON:0000033!1.15e-12!63;UBERON:0003080!1.74e-11!40;UBERON:0002780!4.28e-11!39;UBERON:0001890!4.28e-11!39;UBERON:0006240!4.28e-11!39;UBERON:0002791!1.40e-10!29;UBERON:0003528!1.40e-10!29;UBERON:0001893!1.40e-10!29;UBERON:0000153!5.13e-10!94;UBERON:0000475!6.62e-10!200;UBERON:0003056!7.29e-10!49;UBERON:0001264!2.20e-09!12;UBERON:0003922!2.20e-09!12;UBERON:0002114!2.20e-09!12;UBERON:0003923!2.20e-09!12;UBERON:0003924!2.20e-09!12;UBERON:0003921!2.20e-09!12;UBERON:0007811!7.58e-09!86;UBERON:0001045!1.29e-08!13;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21;UBERON:0002619!5.75e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-18,54;UBERON:0001016,1.21e-17,75;UBERON:0001017,1.68e-17,73;UBERON:0001049,2.58e-17,52;UBERON:0005068,2.58e-17,52;UBERON:0006241,2.58e-17,52;UBERON:0007135,2.58e-17,52;UBERON:0000955,1.69e-14,47;UBERON:0006238,1.69e-14,47;UBERON:0002616,3.58e-14,46;UBERON:0002346,1.42e-13,64;UBERON:0003075,1.42e-13,64;UBERON:0007284,1.42e-13,64;UBERON:0002020,1.61e-13,34;UBERON:0004121,3.25e-12,95;UBERON:0000924,3.25e-12,95;UBERON:0006601,3.25e-12,95;UBERON:0003080,9.02e-12,40;UBERON:0002780,2.27e-11,39;UBERON:0001890,2.27e-11,39;UBERON:0006240,2.27e-11,39;UBERON:0010371,6.71e-11,73;UBERON:0003528,7.68e-11,29;UBERON:0002791,7.68e-11,29;UBERON:0001893,7.68e-11,29;UBERON:0003056,4.20e-10,49;UBERON:0001264,1.31e-09,12;UBERON:0000956,2.23e-07,21;UBERON:0001869,2.23e-07,21;UBERON:0000203,2.23e-07,21;UBERON:0010314,3.40e-07,92;UBERON:0002619,4.00e-07,17 | |||
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| ||
|short_description=p2@Chst2 | |short_description=p2@Chst2 | ||
}} | }} |
Latest revision as of 06:34, 27 September 2015
Short description: | p2@Chst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chst2_5end |
Coexpression cluster: | MCL_coexpression_mm9:23 |
Association with transcript: | -33bp_to_ENSMUST00000036267, NM_018763, uc009raz.2_5end |
EntrezGene: | Chst2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.66e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.66e-09 | 23 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
neural cell | 3.27e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.34e-18 | 54 |
nervous system | 1.21e-17 | 75 |
central nervous system | 1.68e-17 | 73 |
neural tube | 2.58e-17 | 52 |
neural rod | 2.58e-17 | 52 |
future spinal cord | 2.58e-17 | 52 |
neural keel | 2.58e-17 | 52 |
brain | 1.69e-14 | 47 |
future brain | 1.69e-14 | 47 |
regional part of brain | 3.58e-14 | 46 |
neurectoderm | 1.42e-13 | 64 |
neural plate | 1.42e-13 | 64 |
presumptive neural plate | 1.42e-13 | 64 |
gray matter | 1.61e-13 | 34 |
ectoderm-derived structure | 3.25e-12 | 95 |
ectoderm | 3.25e-12 | 95 |
presumptive ectoderm | 3.25e-12 | 95 |
anterior neural tube | 9.02e-12 | 40 |
regional part of forebrain | 2.27e-11 | 39 |
forebrain | 2.27e-11 | 39 |
future forebrain | 2.27e-11 | 39 |
ecto-epithelium | 6.71e-11 | 73 |
brain grey matter | 7.68e-11 | 29 |
regional part of telencephalon | 7.68e-11 | 29 |
telencephalon | 7.68e-11 | 29 |
pre-chordal neural plate | 4.20e-10 | 49 |
pancreas | 1.31e-09 | 12 |
cerebral cortex | 2.23e-07 | 21 |
cerebral hemisphere | 2.23e-07 | 21 |
pallium | 2.23e-07 | 21 |
structure with developmental contribution from neural crest | 3.40e-07 | 92 |
regional part of cerebral cortex | 4.00e-07 | 17 |