FFCP PHASE1:Mm9::chr2:158450639..158450666,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109275 | |EntrezGene=109275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=A2ACC9,Q80US4 | |UniProt=A2ACC9,Q80US4 | ||
|association_with_transcript=0bp_to_NM_175419,uc008nql.1,uc008nqm.1,uc012cij.1_5end | |association_with_transcript=0bp_to_NM_175419,uc008nql.1,uc008nqm.1,uc012cij.1_5end | ||
|cluster_id=chr2:158450639..158450666,+ | |||
|description=CAGE_peak_1_at_Actr5_5end | |description=CAGE_peak_1_at_Actr5_5end | ||
|id=chr2:158450639..158450666,+ | |id=chr2:158450639..158450666,+ | ||
|ontology_enrichment_celltype=CL:0000988!5.52e-13!32;CL:0002032!5.52e-13!32;CL:0000037!5.52e-13!32;CL:0000566!5.52e-13!32;CL:0000837!5.52e-13!32;CL:0002031!1.36e-11!25;CL:0000838!1.02e-08!12;CL:0000084!5.05e-08!11;CL:0000827!5.05e-08!11;CL:0000542!8.37e-08!13;CL:0000051!8.37e-08!13;CL:0002320!3.15e-07!46;CL:0000134!3.15e-07!46;CL:0000791!3.93e-07!9;CL:0000789!3.93e-07!9;CL:0002420!3.93e-07!9;CL:0002419!3.93e-07!9;CL:0000790!3.93e-07!9 | |ontology_enrichment_celltype=CL:0000988!5.52e-13!32;CL:0002032!5.52e-13!32;CL:0000037!5.52e-13!32;CL:0000566!5.52e-13!32;CL:0000837!5.52e-13!32;CL:0002031!1.36e-11!25;CL:0000838!1.02e-08!12;CL:0000084!5.05e-08!11;CL:0000827!5.05e-08!11;CL:0000542!8.37e-08!13;CL:0000051!8.37e-08!13;CL:0002320!3.15e-07!46;CL:0000134!3.15e-07!46;CL:0000791!3.93e-07!9;CL:0000789!3.93e-07!9;CL:0002420!3.93e-07!9;CL:0002419!3.93e-07!9;CL:0000790!3.93e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.52e-13,32;CL:0002032,5.52e-13,32;CL:0000037,5.52e-13,32;CL:0000837,5.52e-13,32;CL:0002031,1.36e-11,25;CL:0000838,1.02e-08,12;CL:0000084,5.05e-08,11;CL:0000827,5.05e-08,11;CL:0000542,8.37e-08,13;CL:0000051,8.37e-08,13;CL:0002320,3.15e-07,46;CL:0000134,3.15e-07,46;CL:0000791,3.93e-07,9;CL:0000789,3.93e-07,9;CL:0002420,3.93e-07,9;CL:0002419,3.93e-07,9;CL:0000790,3.93e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-12!45;UBERON:0003061!2.04e-12!45;UBERON:0002193!1.81e-10!48;UBERON:0004177!9.46e-09!29;UBERON:0003408!1.23e-08!24;UBERON:0002370!2.03e-08!23;UBERON:0000974!2.03e-08!23;UBERON:0004807!2.03e-08!23;UBERON:0005058!2.03e-08!23;UBERON:0003351!2.03e-08!23;UBERON:0009113!2.03e-08!23;UBERON:0003295!2.03e-08!23;UBERON:0009722!2.03e-08!23;UBERON:0005562!2.03e-08!23;UBERON:0007690!2.03e-08!23;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0006562!1.21e-07!24;UBERON:0001557!1.21e-07!24;UBERON:0001042!1.21e-07!24;UBERON:0008814!1.21e-07!24;UBERON:0009145!1.21e-07!24;UBERON:0001004!1.77e-07!42;UBERON:0000065!2.98e-07!41;UBERON:0002384!3.15e-07!46 | |ontology_enrichment_uberon=UBERON:0002390!2.04e-12!45;UBERON:0003061!2.04e-12!45;UBERON:0002193!1.81e-10!48;UBERON:0004177!9.46e-09!29;UBERON:0003408!1.23e-08!24;UBERON:0002370!2.03e-08!23;UBERON:0000974!2.03e-08!23;UBERON:0004807!2.03e-08!23;UBERON:0005058!2.03e-08!23;UBERON:0003351!2.03e-08!23;UBERON:0009113!2.03e-08!23;UBERON:0003295!2.03e-08!23;UBERON:0009722!2.03e-08!23;UBERON:0005562!2.03e-08!23;UBERON:0007690!2.03e-08!23;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0006562!1.21e-07!24;UBERON:0001557!1.21e-07!24;UBERON:0001042!1.21e-07!24;UBERON:0008814!1.21e-07!24;UBERON:0009145!1.21e-07!24;UBERON:0001004!1.77e-07!42;UBERON:0000065!2.98e-07!41;UBERON:0002384!3.15e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.04e-12,45;UBERON:0003061,2.04e-12,45;UBERON:0002193,1.81e-10,48;UBERON:0002405,1.81e-10,48;UBERON:0000153,1.25e-09,43;UBERON:0007811,2.39e-09,36;UBERON:0000926,6.26e-09,120;UBERON:0004120,6.26e-09,120;UBERON:0006603,6.26e-09,120;UBERON:0004177,9.46e-09,29;UBERON:0005057,9.46e-09,29;UBERON:0003408,1.23e-08,24;UBERON:0002370,2.03e-08,23;UBERON:0000974,2.03e-08,23;UBERON:0004807,2.03e-08,23;UBERON:0005058,2.03e-08,23;UBERON:0003351,2.03e-08,23;UBERON:0009113,2.03e-08,23;UBERON:0003295,2.03e-08,23;UBERON:0009722,2.03e-08,23;UBERON:0005562,2.03e-08,23;UBERON:0007690,2.03e-08,23;UBERON:0006562,1.21e-07,24;UBERON:0001557,1.21e-07,24;UBERON:0001042,1.21e-07,24;UBERON:0008814,1.21e-07,24;UBERON:0009145,1.21e-07,24;UBERON:0001004,1.77e-07,42;UBERON:0000065,2.98e-07,41;UBERON:0002384,3.15e-07,46;UBERON:0000077,3.49e-07,35 | |||
|phase1_expression=9.12848428497326,3.83872948403297,5.91499011206397,8.46899791659124,6.51164448930251,7.21880869221126,7.2419918584613,24.5334314538995,19.9919985455367,20.1295492636914,18.320322600129,21.2193942927595,27.3921167889929,31.6461856756771,11.6588416635482,10.3262386368811,13.2916756844348,26.6565529727711,25.5032846506674,26.7365480632759,7.48380953329414,16.3830069481461,12.7987896678078,6.07971206614945,5.50582274561208,6.89078356938024,8.61523992318149,6.46413698057667,6.08074942260396,4.03248207615889,7.09537634096975,22.2260735710871,28.2929802288902,15.8481681015439,9.53210345179206,10.472782657585,12.2501613757421,23.8563029520037,15.626706890476,12.5645698553712,20.5881020810855,20.4913645487534,28.1596004758069,8.56098362233926,5.98123894195136,5.50640256485045,7.82391344348039,3.92445281484804,3.73466510648602,2.72201858703997,2.65974201088189,4.31257693094915,30.0330864843348,29.7398478224651,23.19047214083,3.34437266846731,2.86533439938757,1.54701627683233,9.3065571995415,9.52183762689659,4.43681982454325,6.43804610931351,3.55717918444456,15.2982951937838,9.88866362566974,12.7886420690298,7.49000276296012,9.22123932771731,8.29516898467821,9.45041568321835,10.0955981448663,3.42781181284564,9.49734726091938,9.55428233876641,11.5973019932066,10.1114066527102,4.40463523997555,3.95830748064082,4.45458946443106,7.64940468835124,8.96578907303615,4.68822033501084,6.70039197603314,6.75315132038016,4.5839474333043,4.41942878210502,3.84403538157578,9.31997229126503,5.6794644999888,4.45872204630035,13.6236309689789,6.0229671388697,3.39985666853875,6.47643829965381,3.89865850468601,6.72040330646003,6.74133216632409,5.79463096765396,5.45550609666024,4.59341446863442,9.99988280414432,1.28326477414318,2.54805239706646,7.11066703153331,7.57718643539249,6.33399663687746,7.07734223020697,6.73684890342454,5.95557132388495,7.42210695324124,7.80683970447611,10.0473607843007,7.61031140944993,8.28974523039424,10.2302175208063,8.04266184509923,6.67426412882809,4.33798070759735,15.9229899350977,6.79420769779119,10.1587098491781,11.1521308221101,3.72783522436244,7.31951992528868,8.79676168616511,7.91916871146633,12.3409578241098,14.3976655438418,15.8837783841331,10.0359728401231,5.03250663100489,10.0523481690292,4.86708096538374,4.34716277461562,6.2336413367868,5.353961681236,8.65634592727688,8.9573018839267,7.32895999457657,8.20723237957248,10.539755879979,10.1156925950728,8.10279584124071,8.89158425230719,14.5598108183842,11.4021211053516,11.056803498048,11.9003550539947,10.3472636607764,8.69887968771969,9.67731182901719,10.0830036916684,9.45360647367033,8.358051996532,8.0255033199098,8.7575077400137,9.12877143507205,11.0659600059328,13.924011470384,7.45652781127807,8.67746421930056,7.56260658136262,6.15536312521547,4.72234156193769,6.32495162838251,4.65067889500816,5.36546802799238,8.64063533517054,8.22799249567402,9.19337798842933,6.89084881139774,6.87139940899062,7.46470391989572,8.32079796314305,5.67782861123144,5.35103984372279,4.95628174475697,5.81791246659797,6.82522401712749,6.96710015581316,7.47431275668141,7.66397393568702,6.44896327150124,8.75037880117772,9.01605216934572,9.38784041926862,6.53471542880701,9.74886713001639,9.35827618171777,7.19055526923377,6.91641759599022,6.37252074413975,11.1904061562318,8.22589290790047,5.63538678365402,8.5533557695032,5.81857461502877,11.3620028222316,9.10606134589305,9.15182917473533,7.37894020854462,10.8589504251184,8.89357881261447,7.17433954579204,7.27268281918851,5.8464149220062,8.92584534109413,8.68237775108701,7.63877555344259,5.75392274901621,9.40384315295205,6.04035109013779,11.5014565221884,12.2806512730606,5.92871578917665,6.31447194867779,5.38192240565737,12.0610880340842,10.9004382198297,11.1799932944586,7.65935389277522,8.99648954608497,9.15291968325158,9.04533790185805,8.33152743101048,9.17128144931655,8.6699329258405,8.41565820665345,8.13219320153184,11.7981586595331,11.7425787668809,9.9807850421243,9.04747703635634,6.52686820582452,7.37646409528554,6.89841865761831,6.42202359951168,4.80567915028033,4.59017847054691,4.54447668967871,5.99465616890888,7.41833614163613,4.95473814785438,6.4521575447189,5.79276552614225,6.22768367735431,4.04810701674894,4.38383786866968,4.34816555741176,13.4954952897159,8.94222536812092,8.369083372361,9.77321756121457,12.2077890999676,7.96470830039777,12.1390318077491,9.06970670894253,6.03536255218874,5.31543407185391,9.53048958626175,8.5281336745513,7.27067458955011,9.62542921638748,7.58488219045958,9.48767477174989,9.28219889233682,12.5962654128902,10.9837267359099,12.9358683782754,14.7892554171799,7.27094957933322,9.63191615051181,9.21474515371877,13.3964577610424,3.75474732901937,4.44847348814022,10.8058915046931,6.5954501176592,8.23468576149118,6.87567344180977,7.28171298419132,9.84845398470368,9.03590593552537,5.37733375830478,9.91051108627546,8.2554747185289,7.77817014952789,11.4904758772862,9.70529016819279,11.2101304871196,15.6380155594347,16.6542228265153,21.835595861099,8.59203556213602,8.6992398234812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| ||
|short_description=p1@Actr5 | |short_description=p1@Actr5 | ||
}} | }} |
Latest revision as of 01:18, 26 September 2015
Short description: | p1@Actr5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Actr5_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_NM_175419, uc008nql.1, uc008nqm.1, uc012cij.1_5end |
EntrezGene: | Actr5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.52e-13 | 32 |
hematopoietic oligopotent progenitor cell | 5.52e-13 | 32 |
hematopoietic stem cell | 5.52e-13 | 32 |
hematopoietic multipotent progenitor cell | 5.52e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 1.36e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.02e-08 | 12 |
T cell | 5.05e-08 | 11 |
pro-T cell | 5.05e-08 | 11 |
lymphocyte | 8.37e-08 | 13 |
common lymphoid progenitor | 8.37e-08 | 13 |
connective tissue cell | 3.15e-07 | 46 |
mesenchymal cell | 3.15e-07 | 46 |
mature alpha-beta T cell | 3.93e-07 | 9 |
alpha-beta T cell | 3.93e-07 | 9 |
immature T cell | 3.93e-07 | 9 |
mature T cell | 3.93e-07 | 9 |
immature alpha-beta T cell | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.04e-12 | 45 |
blood island | 2.04e-12 | 45 |
hemolymphoid system | 1.81e-10 | 48 |
immune system | 1.81e-10 | 48 |
anterior region of body | 1.25e-09 | 43 |
craniocervical region | 2.39e-09 | 36 |
mesoderm | 6.26e-09 | 120 |
mesoderm-derived structure | 6.26e-09 | 120 |
presumptive mesoderm | 6.26e-09 | 120 |
hemopoietic organ | 9.46e-09 | 29 |
immune organ | 9.46e-09 | 29 |
gland of gut | 1.23e-08 | 24 |
thymus | 2.03e-08 | 23 |
neck | 2.03e-08 | 23 |
respiratory system epithelium | 2.03e-08 | 23 |
hemolymphoid system gland | 2.03e-08 | 23 |
pharyngeal epithelium | 2.03e-08 | 23 |
thymic region | 2.03e-08 | 23 |
pharyngeal gland | 2.03e-08 | 23 |
entire pharyngeal arch endoderm | 2.03e-08 | 23 |
thymus primordium | 2.03e-08 | 23 |
early pharyngeal endoderm | 2.03e-08 | 23 |
pharynx | 1.21e-07 | 24 |
upper respiratory tract | 1.21e-07 | 24 |
chordate pharynx | 1.21e-07 | 24 |
pharyngeal arch system | 1.21e-07 | 24 |
pharyngeal region of foregut | 1.21e-07 | 24 |
respiratory system | 1.77e-07 | 42 |
respiratory tract | 2.98e-07 | 41 |
connective tissue | 3.15e-07 | 46 |
mixed endoderm/mesoderm-derived structure | 3.49e-07 | 35 |