FFCP PHASE1:Mm9::chr2:25284111..25284125,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11305 | |EntrezGene=11305 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=A2AJ26 | |UniProt=A2AJ26 | ||
|association_with_transcript=-68bp_to_NM_007379,uc008isc.1_5end | |association_with_transcript=-68bp_to_NM_007379,uc008isc.1_5end | ||
|cluster_id=chr2:25284111..25284125,+ | |||
|description=CAGE_peak_2_at_Abca2_5end | |description=CAGE_peak_2_at_Abca2_5end | ||
|id=chr2:25284111..25284125,+ | |id=chr2:25284111..25284125,+ | ||
|ontology_enrichment_celltype=CL:0000221!7.08e-13!44;CL:0000133!7.08e-13!44;CL:0002319!1.31e-12!43;CL:0000055!1.04e-11!50;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000393!1.80e-08!39;CL:0000211!1.80e-08!39 | |ontology_enrichment_celltype=CL:0000221!7.08e-13!44;CL:0000133!7.08e-13!44;CL:0002319!1.31e-12!43;CL:0000055!1.04e-11!50;CL:0000117!1.22e-10!23;CL:0000337!1.22e-10!23;CL:0000540!1.16e-09!33;CL:0000047!1.16e-09!33;CL:0000031!1.16e-09!33;CL:0000404!1.16e-09!33;CL:0000393!1.80e-08!39;CL:0000211!1.80e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.91e-13,44;CL:0000133,1.91e-13,44;CL:0002319,3.68e-13,43;CL:0000117,2.66e-11,23;CL:0000337,2.66e-11,23;CL:0000540,5.23e-10,33;CL:0000047,5.23e-10,33;CL:0000031,5.23e-10,33;CL:0000404,5.23e-10,33;CL:0000393,7.25e-09,39;CL:0000211,7.25e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.99e-28!73;UBERON:0005743!6.99e-28!73;UBERON:0000073!8.11e-28!75;UBERON:0001016!8.11e-28!75;UBERON:0001049!6.06e-23!52;UBERON:0005068!6.06e-23!52;UBERON:0006241!6.06e-23!52;UBERON:0007135!6.06e-23!52;UBERON:0000955!3.51e-22!50;UBERON:0006238!3.51e-22!50;UBERON:0000033!4.09e-22!63;UBERON:0004121!7.37e-22!102;UBERON:0000924!7.37e-22!102;UBERON:0006601!7.37e-22!102;UBERON:0002616!1.37e-21!49;UBERON:0002346!8.40e-20!71;UBERON:0003075!8.40e-20!71;UBERON:0007284!8.40e-20!71;UBERON:0007811!4.68e-19!86;UBERON:0002020!6.88e-17!34;UBERON:0003056!1.17e-16!49;UBERON:0003080!5.31e-16!40;UBERON:0000153!7.01e-16!94;UBERON:0002780!2.26e-15!39;UBERON:0001890!2.26e-15!39;UBERON:0006240!2.26e-15!39;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0000956!1.29e-10!21;UBERON:0001869!1.29e-10!21;UBERON:0000203!1.29e-10!21;UBERON:0002619!1.93e-09!17;UBERON:0000025!4.36e-08!114;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12;UBERON:0004111!1.86e-07!122;UBERON:0000477!5.87e-07!154;UBERON:0002021!7.26e-07!10;UBERON:0000411!7.26e-07!10;UBERON:0001950!7.26e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!6.99e-28!73;UBERON:0005743!6.99e-28!73;UBERON:0000073!8.11e-28!75;UBERON:0001016!8.11e-28!75;UBERON:0001049!6.06e-23!52;UBERON:0005068!6.06e-23!52;UBERON:0006241!6.06e-23!52;UBERON:0007135!6.06e-23!52;UBERON:0000955!3.51e-22!50;UBERON:0006238!3.51e-22!50;UBERON:0000033!4.09e-22!63;UBERON:0004121!7.37e-22!102;UBERON:0000924!7.37e-22!102;UBERON:0006601!7.37e-22!102;UBERON:0002616!1.37e-21!49;UBERON:0002346!8.40e-20!71;UBERON:0003075!8.40e-20!71;UBERON:0007284!8.40e-20!71;UBERON:0007811!4.68e-19!86;UBERON:0002020!6.88e-17!34;UBERON:0003056!1.17e-16!49;UBERON:0003080!5.31e-16!40;UBERON:0000153!7.01e-16!94;UBERON:0002780!2.26e-15!39;UBERON:0001890!2.26e-15!39;UBERON:0006240!2.26e-15!39;UBERON:0002791!2.27e-14!29;UBERON:0003528!2.27e-14!29;UBERON:0001893!2.27e-14!29;UBERON:0000956!1.29e-10!21;UBERON:0001869!1.29e-10!21;UBERON:0000203!1.29e-10!21;UBERON:0002619!1.93e-09!17;UBERON:0000025!4.36e-08!114;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12;UBERON:0004111!1.86e-07!122;UBERON:0000477!5.87e-07!154;UBERON:0002021!7.26e-07!10;UBERON:0000411!7.26e-07!10;UBERON:0001950!7.26e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.71e-29,73;UBERON:0001016,1.99e-29,75;UBERON:0000073,5.30e-26,54;UBERON:0004121,7.64e-25,95;UBERON:0000924,7.64e-25,95;UBERON:0006601,7.64e-25,95;UBERON:0002346,7.88e-25,64;UBERON:0003075,7.88e-25,64;UBERON:0007284,7.88e-25,64;UBERON:0001049,1.66e-24,52;UBERON:0005068,1.66e-24,52;UBERON:0006241,1.66e-24,52;UBERON:0007135,1.66e-24,52;UBERON:0000955,1.96e-21,47;UBERON:0006238,1.96e-21,47;UBERON:0002616,8.19e-21,46;UBERON:0010371,2.77e-20,73;UBERON:0002020,5.24e-18,34;UBERON:0003056,1.22e-17,49;UBERON:0003080,4.70e-17,40;UBERON:0002780,2.22e-16,39;UBERON:0001890,2.22e-16,39;UBERON:0006240,2.22e-16,39;UBERON:0003528,2.65e-15,29;UBERON:0002791,2.65e-15,29;UBERON:0001893,2.65e-15,29;UBERON:0010314,1.97e-14,92;UBERON:0000956,2.83e-11,21;UBERON:0001869,2.83e-11,21;UBERON:0000203,2.83e-11,21;UBERON:0002619,5.15e-10,17;UBERON:0000025,8.15e-09,114;UBERON:0004111,3.53e-08,122;UBERON:0003076,3.86e-08,12;UBERON:0003057,3.86e-08,12;UBERON:0002021,2.96e-07,10;UBERON:0000411,2.96e-07,10;UBERON:0001950,2.96e-07,10 | |||
|phase1_expression=1.60148847104794,0,1.81999695755814,0.60492842261366,0.500895729946347,0.671517087647559,0.700837921786577,4.9066862907799,2.111830832275,2.34064526321993,0,0.239316476986009,2.56801094896809,2.88487327982691,0,1.21485160433896,0,0.946386496074713,1.91960207048034,1.69755860719212,8.67441559540912,7.74469419366905,7.31359409589019,0.95995453676044,1.60586496747019,0,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,0,2.54012269383853,6.76571266343027,0,1.1554064790051,0.166234645358492,0.816677425049476,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,1.45653105909346,1.88845226963366,1.72340783073175,2.38610777810186,3.12956537739216,6.1047043786525,5.27246838562732,8.74934545834275,2.2397827460058,10.062679505548,0.671130424230945,2.17608642603403,8.06625117941913,0.514518872071894,0.286533439938757,2.06268836910977,4.85559506063035,5.81890077199236,3.80298842103708,1.0165335962074,0.889294796111139,1.7997994345628,3.9554654502679,0.7104801149461,4.79360176829448,7.68436610643109,3.21437798156281,2.43010688997043,3.15487442027073,17.9960120174396,13.4729809980484,2.81728838194394,2.97120960156533,7.35375029288017,40.7428759697738,39.455387468323,40.2449117131358,4.87979264601717,4.29991924931325,2.08365348222704,43.273364845214,24.1987922313622,36.213184723104,7.66034322231536,8.39992916714707,4.47358669980721,1.51452386666368,2.26714680320357,0.579728977403356,4.30211938490693,0,2.15881276655127,2.59910566979068,1.79210754838934,1.82577746171277,0,0,0,2.95771181531029,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,3.19714863213368,2.84831672011889,2.82040064223167,0.867426633830679,0.304465478312141,0.461230994512117,1.05505848386836,0.940709657085638,0.628332956648377,0,2.89198713839823,1.76922110389975,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,36.0120380324203,39.1665341741161,0.255457055208591,4.43315960671905,0,3.04968544975355,33.5531032266803,48.952564501593,8.16753288733619,19.2944995413427,24.0372529890511,41.3498208673525,40.3980745038717,1.62942982160506,8.9573018839267,45.4900965180614,5.05060454127538,0.650602214813519,1.37941262660084,1.0803727788321,2.41127708537144,4.49040894398764,2.69038812598185,5.99691037182265,4.9153640440413,0.646703978798527,0,0.703804496655795,0.876782929710299,0.834141747676794,1.0447564995665,0.205782136407943,0.398068533636986,3.51106593656617,1.28673953557358,3.12579849335152,0.207125772535502,0.938104239924385,0.540186184383045,0.946978942340841,0.590292695242212,1.07986979021165,0.465067889500816,1.60964040839772,1.63471479314037,0.822799249567402,0,1.05389452409612,1.46199987425332,2.41505126820156,2.41571553768669,23.7627641877464,4.6307075570678,0.991256348951394,0.528901133327089,0.213288250535234,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,2.51346727741403,0,2.8511185898344,2.52138233317913,2.10407459670956,3.73095569033118,4.42830443938806,3.1399745568275,3.70191491765402,2.37162101669719,0.166845105716094,0.196558995113203,0.674586337154561,0.405720242777006,0.964708639009667,1.78238096246994,1.43848068725405,0.486405680325106,0.823684239564244,0,2.23284568601102,0.312037673114561,2.27320990152401,2.51156378930677,4.3419916922703,1.84753190166605,0.37898282354097,0.814824882210129,0.339490171550376,0.234690248288502,1.34005005953453,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.956728611944923,1.14704320301017,0.518054945597687,0,0,1.63171705145613,0.983528546038072,0.827810238914197,55.3899535457882,63.4115224463819,0.491804836130026,1.26235463602186,1.57754109708128,1.17131623288992,2.80050417052639,1.67278158566786,1.55959071857676,0.849229592366497,2.02405350837447,2.92255857911312,2.76701444562566,12.5315313404505,1.56134093729095,1.42452482933804,1.79175655288934,1.64970122972535,0,0.971122544619926,0,0.754420319023592,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,4.08527526904546,1.44048875225048,1.03486947026204,1.50035924522115,2.30542303734956,2.67553226403106,2.30368628842969,2.43571959291679,0.469343416127421,0.63549621259146,0.220528398054962,1.31909002353184,0.807322133479528,1.14594557363496,0.835606408021955,0.820704498725306,1.1659233465194,62.1174761735207,1.87957968877638,0.412773735926445,0.555583582109135,0.753473828018764,1.0935538217682,0.915112692826091,5.09935289981566,4.47844647435706,6.08079884739465,0,0.790839983952838,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,1.69107881605257,1.19613236835183,0.66183396182839,0.583353565032143,1.03327858782185,0.506868376472335,1.64300134104056,2.47388331203505,9.12276296503684,3.62376181239009,3.16833006883652,0.948033361884535,1.82452693761148,1.64337531463724,1.55904987573354,2.32734704367726,2.38417625737518,2.64429988943931,1.9199638532695,2.1202954489111,2.97206545954499,2.72230699869469,2.14407337627455,1.92423683280659,2.22066114144981,1.81384306892169,0.221985953374065,0.269141569828427,0.167884616364078,1.15913756419314,2.064507229963,0.915758121336325,1.71494703263253,0.501572104035363,16.942555278512,17.4923589872727,16.6139698897425,13.9201077698387,17.8121455140367,16.6186657425734,14.1754725048679,11.7083512838297,14.0474146785103,11.9084871702919,0.207574695168353,2.39414924040619,2.04880326904961,0.729320151204882,0.628839487883947,1.47074806760011,2.00022055021454,1.64828045791115,2.24643446714271,1.01078884705519,1.2673964994512,1.32038438970253,1.591905626988,1.08842759088278,1.14870937911227,0.952587382566147,1.85414921511769,0.578727661391115,1.64834360321323,0.883193520806384,1.02860775715625,1.4198064492747,1.66905332963125,1.30811774969096,1.69396884747595,0.930760686808441,0.182927972872773,1.31534855718921,0.950628796921032,1.68342681497322,1.18635018124174,0.788035859004508,0.409231043169689,1.08455788830176,0.385813221962283,3.49734809113124,1.16965804222704,2.36358159453128,0.765153328275374,0.882365676478062,1.85494268496337 | |phase1_expression=1.60148847104794,0,1.81999695755814,0.60492842261366,0.500895729946347,0.671517087647559,0.700837921786577,4.9066862907799,2.111830832275,2.34064526321993,0,0.239316476986009,2.56801094896809,2.88487327982691,0,1.21485160433896,0,0.946386496074713,1.91960207048034,1.69755860719212,8.67441559540912,7.74469419366905,7.31359409589019,0.95995453676044,1.60586496747019,0,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,0,2.54012269383853,6.76571266343027,0,1.1554064790051,0.166234645358492,0.816677425049476,0.418531630736908,0.7813353445238,0,1.17646297606203,0.683045484958446,1.45653105909346,1.88845226963366,1.72340783073175,2.38610777810186,3.12956537739216,6.1047043786525,5.27246838562732,8.74934545834275,2.2397827460058,10.062679505548,0.671130424230945,2.17608642603403,8.06625117941913,0.514518872071894,0.286533439938757,2.06268836910977,4.85559506063035,5.81890077199236,3.80298842103708,1.0165335962074,0.889294796111139,1.7997994345628,3.9554654502679,0.7104801149461,4.79360176829448,7.68436610643109,3.21437798156281,2.43010688997043,3.15487442027073,17.9960120174396,13.4729809980484,2.81728838194394,2.97120960156533,7.35375029288017,40.7428759697738,39.455387468323,40.2449117131358,4.87979264601717,4.29991924931325,2.08365348222704,43.273364845214,24.1987922313622,36.213184723104,7.66034322231536,8.39992916714707,4.47358669980721,1.51452386666368,2.26714680320357,0.579728977403356,4.30211938490693,0,2.15881276655127,2.59910566979068,1.79210754838934,1.82577746171277,0,0,0,2.95771181531029,0,0,0,0.432982082022428,0.253359865475099,1.51657333504435,3.19714863213368,2.84831672011889,2.82040064223167,0.867426633830679,0.304465478312141,0.461230994512117,1.05505848386836,0.940709657085638,0.628332956648377,0,2.89198713839823,1.76922110389975,0.647067399789637,0.883366073841574,0.484875253135222,1.86391761218122,36.0120380324203,39.1665341741161,0.255457055208591,4.43315960671905,0,3.04968544975355,33.5531032266803,48.952564501593,8.16753288733619,19.2944995413427,24.0372529890511,41.3498208673525,40.3980745038717,1.62942982160506,8.9573018839267,45.4900965180614,5.05060454127538,0.650602214813519,1.37941262660084,1.0803727788321,2.41127708537144,4.49040894398764,2.69038812598185,5.99691037182265,4.9153640440413,0.646703978798527,0,0.703804496655795,0.876782929710299,0.834141747676794,1.0447564995665,0.205782136407943,0.398068533636986,3.51106593656617,1.28673953557358,3.12579849335152,0.207125772535502,0.938104239924385,0.540186184383045,0.946978942340841,0.590292695242212,1.07986979021165,0.465067889500816,1.60964040839772,1.63471479314037,0.822799249567402,0,1.05389452409612,1.46199987425332,2.41505126820156,2.41571553768669,23.7627641877464,4.6307075570678,0.991256348951394,0.528901133327089,0.213288250535234,1.16118335930219,0.128867461322093,0.201683524623343,0,0.190225626112559,0.949058123089023,0.164698954724011,0,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,0.398282546508734,0.758671603812327,2.51346727741403,0,2.8511185898344,2.52138233317913,2.10407459670956,3.73095569033118,4.42830443938806,3.1399745568275,3.70191491765402,2.37162101669719,0.166845105716094,0.196558995113203,0.674586337154561,0.405720242777006,0.964708639009667,1.78238096246994,1.43848068725405,0.486405680325106,0.823684239564244,0,2.23284568601102,0.312037673114561,2.27320990152401,2.51156378930677,4.3419916922703,1.84753190166605,0.37898282354097,0.814824882210129,0.339490171550376,0.234690248288502,1.34005005953453,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0.956728611944923,1.14704320301017,0.518054945597687,0,0,1.63171705145613,0.983528546038072,0.827810238914197,55.3899535457882,63.4115224463819,0.491804836130026,1.26235463602186,1.57754109708128,1.17131623288992,2.80050417052639,1.67278158566786,1.55959071857676,0.849229592366497,2.02405350837447,2.92255857911312,2.76701444562566,12.5315313404505,1.56134093729095,1.42452482933804,1.79175655288934,1.64970122972535,0,0.971122544619926,0,0.754420319023592,0.590603785761546,0.614870295887855,0.775284879504663,0,0.712994756769443,0.632073515871632,1.05418608574999,0,4.08527526904546,1.44048875225048,1.03486947026204,1.50035924522115,2.30542303734956,2.67553226403106,2.30368628842969,2.43571959291679,0.469343416127421,0.63549621259146,0.220528398054962,1.31909002353184,0.807322133479528,1.14594557363496,0.835606408021955,0.820704498725306,1.1659233465194,62.1174761735207,1.87957968877638,0.412773735926445,0.555583582109135,0.753473828018764,1.0935538217682,0.915112692826091,5.09935289981566,4.47844647435706,6.08079884739465,0,0.790839983952838,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,1.69107881605257,1.19613236835183,0.66183396182839,0.583353565032143,1.03327858782185,0.506868376472335,1.64300134104056,2.47388331203505,9.12276296503684,3.62376181239009,3.16833006883652,0.948033361884535,1.82452693761148,1.64337531463724,1.55904987573354,2.32734704367726,2.38417625737518,2.64429988943931,1.9199638532695,2.1202954489111,2.97206545954499,2.72230699869469,2.14407337627455,1.92423683280659,2.22066114144981,1.81384306892169,0.221985953374065,0.269141569828427,0.167884616364078,1.15913756419314,2.064507229963,0.915758121336325,1.71494703263253,0.501572104035363,16.942555278512,17.4923589872727,16.6139698897425,13.9201077698387,17.8121455140367,16.6186657425734,14.1754725048679,11.7083512838297,14.0474146785103,11.9084871702919,0.207574695168353,2.39414924040619,2.04880326904961,0.729320151204882,0.628839487883947,1.47074806760011,2.00022055021454,1.64828045791115,2.24643446714271,1.01078884705519,1.2673964994512,1.32038438970253,1.591905626988,1.08842759088278,1.14870937911227,0.952587382566147,1.85414921511769,0.578727661391115,1.64834360321323,0.883193520806384,1.02860775715625,1.4198064492747,1.66905332963125,1.30811774969096,1.69396884747595,0.930760686808441,0.182927972872773,1.31534855718921,0.950628796921032,1.68342681497322,1.18635018124174,0.788035859004508,0.409231043169689,1.08455788830176,0.385813221962283,3.49734809113124,1.16965804222704,2.36358159453128,0.765153328275374,0.882365676478062,1.85494268496337 | ||
|short_description=p2@Abca2 | |short_description=p2@Abca2 | ||
}} | }} |
Latest revision as of 10:14, 26 September 2015
Short description: | p2@Abca2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Abca2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -68bp_to_NM_007379, uc008isc.1_5end |
EntrezGene: | Abca2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.91e-13 | 44 |
neurectodermal cell | 1.91e-13 | 44 |
neural cell | 3.68e-13 | 43 |
CNS neuron (sensu Vertebrata) | 2.66e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-11 | 23 |
neuron | 5.23e-10 | 33 |
neuronal stem cell | 5.23e-10 | 33 |
neuroblast | 5.23e-10 | 33 |
electrically signaling cell | 5.23e-10 | 33 |
electrically responsive cell | 7.25e-09 | 39 |
electrically active cell | 7.25e-09 | 39 |