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FFCP PHASE1:Mm9::chr3:107261840..107261893,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=99738
|EntrezGene=99738
|HGNC=
|HGNC=
|MCL_coexpression_id=984
|TSSclassifier=NA
|UniProt=Q8R1C0
|UniProt=Q8R1C0
|association_with_transcript=-24bp_to_ENSMUST00000009617,NM_145922,uc008qxa.1_5end
|association_with_transcript=-24bp_to_ENSMUST00000009617,NM_145922,uc008qxa.1_5end
|cluster_id=chr3:107261840..107261893,-
|description=CAGE_peak_1_at_Kcnc4_5end
|description=CAGE_peak_1_at_Kcnc4_5end
|id=chr3:107261840..107261893,-
|id=chr3:107261840..107261893,-
|ontology_enrichment_celltype=CL:0000117!1.42e-08!23;CL:0000337!1.42e-08!23
|ontology_enrichment_celltype=CL:0000117!1.42e-08!23;CL:0000337!1.42e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-10,23;CL:0000337,2.64e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.95e-19!71;UBERON:0003075!2.95e-19!71;UBERON:0007284!2.95e-19!71;UBERON:0004121!6.35e-19!102;UBERON:0000924!6.35e-19!102;UBERON:0006601!6.35e-19!102;UBERON:0000033!4.05e-17!63;UBERON:0001049!1.85e-16!52;UBERON:0005068!1.85e-16!52;UBERON:0006241!1.85e-16!52;UBERON:0007135!1.85e-16!52;UBERON:0000955!2.71e-15!50;UBERON:0006238!2.71e-15!50;UBERON:0002616!1.06e-14!49;UBERON:0001017!1.07e-13!73;UBERON:0005743!1.07e-13!73;UBERON:0000073!2.95e-13!75;UBERON:0001016!2.95e-13!75;UBERON:0003056!2.45e-12!49;UBERON:0002020!5.83e-12!34;UBERON:0003080!1.06e-10!40;UBERON:0002780!4.99e-10!39;UBERON:0001890!4.99e-10!39;UBERON:0006240!4.99e-10!39;UBERON:0002791!5.54e-09!29;UBERON:0003528!5.54e-09!29;UBERON:0001893!5.54e-09!29;UBERON:0002021!5.09e-08!10;UBERON:0000411!5.09e-08!10;UBERON:0001950!5.09e-08!10;UBERON:0007811!2.19e-07!86;UBERON:0003076!5.43e-07!12;UBERON:0003057!5.43e-07!12
|ontology_enrichment_uberon=UBERON:0002346!2.95e-19!71;UBERON:0003075!2.95e-19!71;UBERON:0007284!2.95e-19!71;UBERON:0004121!6.35e-19!102;UBERON:0000924!6.35e-19!102;UBERON:0006601!6.35e-19!102;UBERON:0000033!4.05e-17!63;UBERON:0001049!1.85e-16!52;UBERON:0005068!1.85e-16!52;UBERON:0006241!1.85e-16!52;UBERON:0007135!1.85e-16!52;UBERON:0000955!2.71e-15!50;UBERON:0006238!2.71e-15!50;UBERON:0002616!1.06e-14!49;UBERON:0001017!1.07e-13!73;UBERON:0005743!1.07e-13!73;UBERON:0000073!2.95e-13!75;UBERON:0001016!2.95e-13!75;UBERON:0003056!2.45e-12!49;UBERON:0002020!5.83e-12!34;UBERON:0003080!1.06e-10!40;UBERON:0002780!4.99e-10!39;UBERON:0001890!4.99e-10!39;UBERON:0006240!4.99e-10!39;UBERON:0002791!5.54e-09!29;UBERON:0003528!5.54e-09!29;UBERON:0001893!5.54e-09!29;UBERON:0002021!5.09e-08!10;UBERON:0000411!5.09e-08!10;UBERON:0001950!5.09e-08!10;UBERON:0007811!2.19e-07!86;UBERON:0003076!5.43e-07!12;UBERON:0003057!5.43e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-21,54;UBERON:0001049,2.85e-19,52;UBERON:0005068,2.85e-19,52;UBERON:0006241,2.85e-19,52;UBERON:0007135,2.85e-19,52;UBERON:0001017,8.53e-18,73;UBERON:0001016,5.07e-17,75;UBERON:0002346,5.29e-17,64;UBERON:0003075,5.29e-17,64;UBERON:0007284,5.29e-17,64;UBERON:0002020,1.28e-16,34;UBERON:0004121,1.56e-14,95;UBERON:0000924,1.56e-14,95;UBERON:0006601,1.56e-14,95;UBERON:0000955,2.58e-14,47;UBERON:0006238,2.58e-14,47;UBERON:0010371,1.17e-13,73;UBERON:0002616,1.85e-13,46;UBERON:0002021,5.26e-13,10;UBERON:0000411,5.26e-13,10;UBERON:0001950,5.26e-13,10;UBERON:0010314,9.33e-13,92;UBERON:0003528,1.10e-11,29;UBERON:0002791,1.10e-11,29;UBERON:0001893,1.10e-11,29;UBERON:0003080,1.04e-10,40;UBERON:0003076,1.10e-10,12;UBERON:0003057,1.10e-10,12;UBERON:0003056,3.20e-10,49;UBERON:0002780,9.54e-10,39;UBERON:0001890,9.54e-10,39;UBERON:0006240,9.54e-10,39;UBERON:0002240,1.61e-08,6;UBERON:0005174,1.61e-08,6;UBERON:0001137,1.61e-08,6;UBERON:0002619,3.03e-08,17;UBERON:0000956,1.59e-07,21;UBERON:0001869,1.59e-07,21;UBERON:0000203,1.59e-07,21;UBERON:0001948,4.07e-07,5;UBERON:0002315,4.07e-07,5;UBERON:0002950,4.49e-07,4;UBERON:0001891,4.49e-07,4;UBERON:0009616,4.49e-07,4;UBERON:0010286,4.49e-07,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,13.4255962669788,8.39300455616131,0.122490799214954,0,0.919218786610021,9.91042928994498,9.19348834213351,9.83081812839958,0.659431438650969,1.18933936683133,1.56274011167028,15.6342479440773,8.4414391504752,10.0846843532695,6.18720029494702,4.9830088279686,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,7.3031098468511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,2.52351636410202,1.38788261412909,0.304465478312141,1.15307748628029,0.904335843315735,0.940709657085638,1.0053327306374,0,1.01219549843938,0.884610551949874,5.98537344805414,6.62524555381181,1.93950101254089,0,5.27005434620785,4.81727425670947,0,0,0,0,12.7322043494099,1.83000241127451,0.251308704225729,9.03886464999838,7.41574826257959,10.389402227978,7.13861557498134,0.203678727700633,2.86136032403214,4.54900965180614,1.05220927943237,0,0.229902104433473,0.360124259610698,0.452114453507145,0.476255494059295,1.0249097622788,0.468508622798644,1.81092359517311,0,0,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,10.0939175310781,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,11.3990918891332,15.003095883802,0,37.6181681534516,0,0,0,0,0,0,0,0,0,5.46246237917072,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.484393280087717,0.542816324353403,0.716234064018819,0.164140899745061,0.291480836629851,11.4963687246516,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21479882314986,0.221985953374065,0,0,1.15913756419314,0,0.36630324853453,0.428736758158132,0,9.03602948187307,9.66682996665071,8.59343270159095,7.38968684077857,5.48066015816514,6.0431511791176,6.07520250208625,7.20513925158753,4.53142408984205,5.69536342927002,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,1.28367683836726,1.26348605881899,0.50695859978048,1.13175804831646,0.561849044819294,1.21647789569252,0.861532034334199,0.476293691283074,0.579421629724277,1.73618298417335,3.29668720642645,1.17759136107518,0,0.70990322463735,1.43061713968393,0.436039249896986,1.03520318456864,0.846146078916765,0.73171189149109,0,0.407412341537585,1.12228454331548,0.830445126869219,0.492522411877817,0.409231043169689,0.154936841185966,0.578719832943424,1.24905288968973,2.10538447600868,0.859484216193193,2.29545998482612,7.27951683094401,6.26043156175138
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,13.4255962669788,8.39300455616131,0.122490799214954,0,0.919218786610021,9.91042928994498,9.19348834213351,9.83081812839958,0.659431438650969,1.18933936683133,1.56274011167028,15.6342479440773,8.4414391504752,10.0846843532695,6.18720029494702,4.9830088279686,1.67759501242771,0,0.151143120213571,0,0,0,0,0,0,7.3031098468511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,2.52351636410202,1.38788261412909,0.304465478312141,1.15307748628029,0.904335843315735,0.940709657085638,1.0053327306374,0,1.01219549843938,0.884610551949874,5.98537344805414,6.62524555381181,1.93950101254089,0,5.27005434620785,4.81727425670947,0,0,0,0,12.7322043494099,1.83000241127451,0.251308704225729,9.03886464999838,7.41574826257959,10.389402227978,7.13861557498134,0.203678727700633,2.86136032403214,4.54900965180614,1.05220927943237,0,0.229902104433473,0.360124259610698,0.452114453507145,0.476255494059295,1.0249097622788,0.468508622798644,1.81092359517311,0,0,0.175951124163949,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0,10.0939175310781,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.0632365371242573,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,11.3990918891332,15.003095883802,0,37.6181681534516,0,0,0,0,0,0,0,0,0,5.46246237917072,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.484393280087717,0.542816324353403,0.716234064018819,0.164140899745061,0.291480836629851,11.4963687246516,0,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.337912250981556,0.117357238645754,0,0,0,4.60848010012585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21479882314986,0.221985953374065,0,0,1.15913756419314,0,0.36630324853453,0.428736758158132,0,9.03602948187307,9.66682996665071,8.59343270159095,7.38968684077857,5.48066015816514,6.0431511791176,6.07520250208625,7.20513925158753,4.53142408984205,5.69536342927002,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,1.28367683836726,1.26348605881899,0.50695859978048,1.13175804831646,0.561849044819294,1.21647789569252,0.861532034334199,0.476293691283074,0.579421629724277,1.73618298417335,3.29668720642645,1.17759136107518,0,0.70990322463735,1.43061713968393,0.436039249896986,1.03520318456864,0.846146078916765,0.73171189149109,0,0.407412341537585,1.12228454331548,0.830445126869219,0.492522411877817,0.409231043169689,0.154936841185966,0.578719832943424,1.24905288968973,2.10538447600868,0.859484216193193,2.29545998482612,7.27951683094401,6.26043156175138
|short_description=p1@Kcnc4
|short_description=p1@Kcnc4
}}
}}

Latest revision as of 07:04, 27 September 2015

Short description:p1@Kcnc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnc4_5end
Coexpression cluster:MCL_coexpression_mm9:984
Association with transcript: -24bp_to_ENSMUST00000009617, NM_145922, uc008qxa.1_5end
EntrezGene:Kcnc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.73
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A315.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.64e-1023
neuroblast (sensu Vertebrata)2.64e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.72e-2154
neural tube2.85e-1952
neural rod2.85e-1952
future spinal cord2.85e-1952
neural keel2.85e-1952
central nervous system8.53e-1873
nervous system5.07e-1775
neurectoderm5.29e-1764
neural plate5.29e-1764
presumptive neural plate5.29e-1764
gray matter1.28e-1634
ectoderm-derived structure1.56e-1495
ectoderm1.56e-1495
presumptive ectoderm1.56e-1495
brain2.58e-1447
future brain2.58e-1447
ecto-epithelium1.17e-1373
regional part of brain1.85e-1346
occipital lobe5.26e-1310
visual cortex5.26e-1310
neocortex5.26e-1310
structure with developmental contribution from neural crest9.33e-1392
brain grey matter1.10e-1129
regional part of telencephalon1.10e-1129
telencephalon1.10e-1129
anterior neural tube1.04e-1040
posterior neural tube1.10e-1012
chordal neural plate1.10e-1012
pre-chordal neural plate3.20e-1049
regional part of forebrain9.54e-1039
forebrain9.54e-1039
future forebrain9.54e-1039
spinal cord1.61e-086
dorsal region element1.61e-086
dorsum1.61e-086
regional part of cerebral cortex3.03e-0817
cerebral cortex1.59e-0721
cerebral hemisphere1.59e-0721
pallium1.59e-0721
regional part of spinal cord4.07e-075
gray matter of spinal cord4.07e-075
regional part of midbrain4.49e-074
midbrain4.49e-074
presumptive midbrain4.49e-074
midbrain neural tube4.49e-074
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