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FFCP PHASE1:Mm9::chr3:135271185..135271254,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18033
|EntrezGene=18033
|HGNC=
|HGNC=
|MCL_coexpression_id=115
|TSSclassifier=NA
|UniProt=F6Z9G5
|UniProt=F6Z9G5
|association_with_transcript=0bp_to_ENSMUST00000132668_5end
|association_with_transcript=0bp_to_ENSMUST00000132668_5end
|cluster_id=chr3:135271185..135271254,-
|description=CAGE_peak_4_at_Nfkb1_5end
|description=CAGE_peak_4_at_Nfkb1_5end
|id=chr3:135271185..135271254,-
|id=chr3:135271185..135271254,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000049,8.53e-09,19
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!1.44e-15!70;UBERON:0002390!7.96e-13!45;UBERON:0003061!7.96e-13!45;UBERON:0002193!1.32e-12!48;UBERON:0005057!5.48e-09!51;UBERON:0000926!5.67e-09!193;UBERON:0004120!5.67e-09!193;UBERON:0006603!5.67e-09!193;UBERON:0001041!1.09e-08!92;UBERON:0009569!2.32e-08!66;UBERON:0002371!4.28e-08!16;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22;UBERON:0003104!1.17e-07!131;UBERON:0009142!1.17e-07!131;UBERON:0000077!1.73e-07!97;UBERON:0003081!7.86e-07!88;UBERON:0002368!8.36e-07!60
|ontology_enrichment_uberon=UBERON:0002405!1.44e-15!70;UBERON:0002390!7.96e-13!45;UBERON:0003061!7.96e-13!45;UBERON:0002193!1.32e-12!48;UBERON:0005057!5.48e-09!51;UBERON:0000926!5.67e-09!193;UBERON:0004120!5.67e-09!193;UBERON:0006603!5.67e-09!193;UBERON:0001041!1.09e-08!92;UBERON:0009569!2.32e-08!66;UBERON:0002371!4.28e-08!16;UBERON:0001474!1.05e-07!22;UBERON:0004765!1.05e-07!22;UBERON:0001434!1.05e-07!22;UBERON:0003104!1.17e-07!131;UBERON:0009142!1.17e-07!131;UBERON:0000077!1.73e-07!97;UBERON:0003081!7.86e-07!88;UBERON:0002368!8.36e-07!60
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.56e-16,45;UBERON:0003061,1.56e-16,45;UBERON:0002193,1.28e-15,48;UBERON:0002405,1.28e-15,48;UBERON:0001041,2.14e-12,80;UBERON:0009569,2.49e-10,66;UBERON:0001474,2.80e-10,22;UBERON:0004765,2.80e-10,22;UBERON:0001434,2.80e-10,22;UBERON:0002371,3.44e-10,16;UBERON:0005911,4.01e-09,69;UBERON:0003081,1.20e-08,87;UBERON:0000065,5.26e-08,41;UBERON:0005177,5.74e-08,79;UBERON:0004177,6.40e-08,29;UBERON:0005057,6.40e-08,29;UBERON:0001004,1.44e-07,42;UBERON:0002368,1.52e-07,60;UBERON:0002204,3.64e-07,32;UBERON:0002048,4.98e-07,14;UBERON:0000117,4.98e-07,14;UBERON:0000171,4.98e-07,14;UBERON:0000170,4.98e-07,14;UBERON:0005597,4.98e-07,14;UBERON:0000118,4.98e-07,14;UBERON:0002100,8.25e-07,90
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0.645616617207881,1.40788722151667,0.70219357896598,1.19852577757853,0.319088635981346,0.513602189793617,0.0874204024189974,10.6595123781012,7.89653542820321,6.99561878128147,12.9339487796877,9.87223921961319,6.36584477697045,1.10556277196391,15.7872612409408,15.1495877700583,0.799962113967033,0.45881856213434,0,0,0,0,0,0.221730510655305,0,1.84519436275371,0,0,0,0,3.34825304589526,3.906676722619,5.75876118371178,1.76469446409304,4.78131839470912,3.88408282424923,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0,0,5.70460860596304,0,0.336093799142464,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,8.54904731417329,10.8775299882367,7.8152812644071,1.79760066311043,2.68952813725088,0.725827286159344,0.405017814995072,0.420649922702764,0.285650984403804,1.76694832761291,0.122490799214954,0.575072826109418,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.457438218012048,1.04182674111352,1.11673199600552,0,0.45839474333043,0.294628585473668,0.711858403995515,0.559198337475902,0.302904773332736,0.0755715601067855,11.0148505706638,6.88339101585109,0,0,0.649776417447669,0.896053774194671,2.10666630197628,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,1.48439043634778,4.14300613835475,0.593768556259299,1.21439728736295,1.21786191324856,0.691846491768175,1.05505848386836,1.41106448562846,0.628332956648377,0.247194967734374,0.722996784599558,13.2691582792481,2.58826959915855,4.41683036920787,3.87900202508178,0,0,0,0,25.4008063952551,16.197373736822,19.4417447421789,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,0.41557608911912,0.162241263067758,1.12023300235348,5.72272064806428,0.252722758433675,0.420883711772948,0.520481771850815,0.919608417733892,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0.562210347358373,0.776110112217047,0,0.756424320671277,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0.796137067273973,21.7686088067103,23.6760074545538,22.1647529528562,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.658239399653922,2.95501435342371,2.83740833410495,2.92399974850665,2.41505126820156,2.95254121272818,0.210289948564127,0.720332286654991,0.330418782983798,0,1.06644125267617,1.16118335930219,0.38660238396628,0.80673409849337,0.889512175379481,0.951128130562796,0.474529061544512,1.64698954724011,1.00534083520108,0.596869416123452,1.75467678407208,0.898819408654221,0.864552199498777,0.597423819763102,1.13800740571849,1.5994791765362,0,1.01825663922657,0.581857461502877,1.19230893813542,1.51767689098217,1.77132177575523,1.255989822731,1.48076596706161,2.07516838961004,2.66952169145751,3.73462090715086,4.04751802292737,3.44862206360455,2.894125917029,2.80088436959562,1.43848068725405,3.72911021582581,1.09824565275233,4.31304619582064,2.60498663367952,3.12037673114561,2.02063102357689,0.358794827043824,1.4473305640901,7.7596339869974,0.947457058852424,1.95557971730431,2.20668611507745,3.28566347603903,4.69017520837084,4.28478553594825,3.31727201358258,5.35959489961049,5.97954662051692,7.17546458958692,7.86543910635542,6.56202931090403,7.23245292907558,9.04747703635634,0,0.983528546038072,0,0.321101179975584,0.35163505977661,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,1.27746076687442,0.534196811001766,0.162886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0.943025398779491,0.295301892880773,2.15204603560749,1.80899805217755,1.45413491791002,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,1.26042765821917,1.4229455216103,1.07168517515796,2.12808280370728,0.891844088010353,1.48094118541909,1.522324745573,0.704015124191131,0,0.220528398054962,1.6488625294148,0.968786560175433,0.603129249281559,0.716234064018819,0.328281799490123,1.45740418314925,0.927126510052548,9.3978984438819,4.54051109519089,7.22258656741876,8.09984365120171,8.74843057414561,7.32090154260872,30.596117398894,26.7307273938187,21.9737958349034,2.86401185404534,0.790839983952838,1.01659733563424,0.432021363287205,1.04544148007234,0.436725127492355,1.34864346384821,0.991841468704031,0.785267825952089,0.648074866458964,0,0,0,0.827292452285488,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.911430693907651,0.314578033277133,0,0,5.37218905067903,5.47358081283443,7.49789987303239,9.35429925440124,3.93858730468459,6.15912199821921,2.28371354087941,4.72606486958647,5.25025539730368,4.49620159264499,2.92395936896837,3.31356794515158,5.19543944857779,4.20756847853648,0,0,0,0,0.772758376128762,0.750729901804728,0.915758121336325,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.518936737920883,0,0.6829344230165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|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0,0.645616617207881,1.40788722151667,0.70219357896598,1.19852577757853,0.319088635981346,0.513602189793617,0.0874204024189974,10.6595123781012,7.89653542820321,6.99561878128147,12.9339487796877,9.87223921961319,6.36584477697045,1.10556277196391,15.7872612409408,15.1495877700583,0.799962113967033,0.45881856213434,0,0,0,0,0,0.221730510655305,0,1.84519436275371,0,0,0,0,3.34825304589526,3.906676722619,5.75876118371178,1.76469446409304,4.78131839470912,3.88408282424923,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0,0,5.70460860596304,0,0.336093799142464,0,0.286533439938757,0,0.606949382578793,0.528990979272033,0,0,0,8.54904731417329,10.8775299882367,7.8152812644071,1.79760066311043,2.68952813725088,0.725827286159344,0.405017814995072,0.420649922702764,0.285650984403804,1.76694832761291,0.122490799214954,0.575072826109418,0,0,0.383062014255563,0.153606533256243,0.395658863190582,0.457438218012048,1.04182674111352,1.11673199600552,0,0.45839474333043,0.294628585473668,0.711858403995515,0.559198337475902,0.302904773332736,0.0755715601067855,11.0148505706638,6.88339101585109,0,0,0.649776417447669,0.896053774194671,2.10666630197628,0,0,0.35333957451034,0,1.28326477414318,0,0,0,0,0,1.48439043634778,4.14300613835475,0.593768556259299,1.21439728736295,1.21786191324856,0.691846491768175,1.05505848386836,1.41106448562846,0.628332956648377,0.247194967734374,0.722996784599558,13.2691582792481,2.58826959915855,4.41683036920787,3.87900202508178,0,0,0,0,25.4008063952551,16.197373736822,19.4417447421789,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,0.41557608911912,0.162241263067758,1.12023300235348,5.72272064806428,0.252722758433675,0.420883711772948,0.520481771850815,0.919608417733892,0.180062129805349,0.60281927134286,0.272145996605311,0.2562274405697,0.562210347358373,0.776110112217047,0,0.756424320671277,0.351902248327898,0.219195732427575,0.556094498451196,0,0.411564272815887,0.796137067273973,21.7686088067103,23.6760074545538,22.1647529528562,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.983821158737019,0.462801338662135,0.697601834251224,0.268273401399619,1.28441876603886,0.658239399653922,2.95501435342371,2.83740833410495,2.92399974850665,2.41505126820156,2.95254121272818,0.210289948564127,0.720332286654991,0.330418782983798,0,1.06644125267617,1.16118335930219,0.38660238396628,0.80673409849337,0.889512175379481,0.951128130562796,0.474529061544512,1.64698954724011,1.00534083520108,0.596869416123452,1.75467678407208,0.898819408654221,0.864552199498777,0.597423819763102,1.13800740571849,1.5994791765362,0,1.01825663922657,0.581857461502877,1.19230893813542,1.51767689098217,1.77132177575523,1.255989822731,1.48076596706161,2.07516838961004,2.66952169145751,3.73462090715086,4.04751802292737,3.44862206360455,2.894125917029,2.80088436959562,1.43848068725405,3.72911021582581,1.09824565275233,4.31304619582064,2.60498663367952,3.12037673114561,2.02063102357689,0.358794827043824,1.4473305640901,7.7596339869974,0.947457058852424,1.95557971730431,2.20668611507745,3.28566347603903,4.69017520837084,4.28478553594825,3.31727201358258,5.35959489961049,5.97954662051692,7.17546458958692,7.86543910635542,6.56202931090403,7.23245292907558,9.04747703635634,0,0.983528546038072,0,0.321101179975584,0.35163505977661,0,0.757412781613119,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,1.27746076687442,0.534196811001766,0.162886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0.943025398779491,0.295301892880773,2.15204603560749,1.80899805217755,1.45413491791002,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,1.26042765821917,1.4229455216103,1.07168517515796,2.12808280370728,0.891844088010353,1.48094118541909,1.522324745573,0.704015124191131,0,0.220528398054962,1.6488625294148,0.968786560175433,0.603129249281559,0.716234064018819,0.328281799490123,1.45740418314925,0.927126510052548,9.3978984438819,4.54051109519089,7.22258656741876,8.09984365120171,8.74843057414561,7.32090154260872,30.596117398894,26.7307273938187,21.9737958349034,2.86401185404534,0.790839983952838,1.01659733563424,0.432021363287205,1.04544148007234,0.436725127492355,1.34864346384821,0.991841468704031,0.785267825952089,0.648074866458964,0,0,0,0.827292452285488,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.911430693907651,0.314578033277133,0,0,5.37218905067903,5.47358081283443,7.49789987303239,9.35429925440124,3.93858730468459,6.15912199821921,2.28371354087941,4.72606486958647,5.25025539730368,4.49620159264499,2.92395936896837,3.31356794515158,5.19543944857779,4.20756847853648,0,0,0,0,0.772758376128762,0.750729901804728,0.915758121336325,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,0.518936737920883,0,0.6829344230165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|short_description=p4@Nfkb1
|short_description=p4@Nfkb1
}}
}}

Latest revision as of 15:59, 1 October 2015

Short description:p4@Nfkb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nfkb1_5end
Coexpression cluster:MCL_coexpression_mm9:115
Association with transcript: 0bp_to_ENSMUST00000132668_5end
EntrezGene:Nfkb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nfkb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.15
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.44
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.72
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.68
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.16
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G29.40
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D18.10
spleen, neonate N20.CNhs11112.824-19H18.75
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.97
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C59.35
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C45.25
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A23.31
thymus, neonate N25.CNhs11125.1362-25G75.20
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
common myeloid progenitor8.53e-0919

Uber anatomy
Ontology termp-valuen
hematopoietic system1.56e-1645
blood island1.56e-1645
hemolymphoid system1.28e-1548
immune system1.28e-1548
foregut2.14e-1280
subdivision of trunk2.49e-1066
bone element2.80e-1022
skeletal element2.80e-1022
skeletal system2.80e-1022
bone marrow3.44e-1016
endo-epithelium4.01e-0969
lateral plate mesoderm1.20e-0887
respiratory tract5.26e-0841
trunk region element5.74e-0879
hemopoietic organ6.40e-0829
immune organ6.40e-0829
respiratory system1.44e-0742
endocrine gland1.52e-0760
musculoskeletal system3.64e-0732
lung4.98e-0714
respiratory tube4.98e-0714
respiration organ4.98e-0714
pair of lungs4.98e-0714
lung primordium4.98e-0714
lung bud4.98e-0714
trunk8.25e-0790
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