FFCP PHASE1:Hg19::chr10:126004381..126004386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126004381..126004386,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:126004381..126004386,+ | |description=CAGE_peak_at_chr10:126004381..126004386,+ | ||
|id=chr10:126004381..126004386,+ | |id=chr10:126004381..126004386,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.68e-146!42;CL:0000860!5.09e-136!45;CL:0002194!2.77e-93!63;CL:0000576!2.77e-93!63;CL:0000040!2.77e-93!63;CL:0000559!2.77e-93!63;CL:0002009!3.25e-90!65;CL:0000766!2.11e-89!76;CL:0000839!2.67e-83!70;CL:0000557!4.95e-82!71;CL:0000763!2.70e-58!112;CL:0000049!2.70e-58!112;CL:0002087!3.54e-57!119;CL:0000738!2.21e-55!140;CL:0002031!2.26e-46!124;CL:0000037!1.43e-43!172;CL:0000566!1.43e-43!172;CL:0000988!1.01e-40!182;CL:0002032!4.30e-39!165;CL:0000837!4.30e-39!165;CL:0002393!4.80e-29!9;CL:0002397!4.80e-29!9;CL:0000134!1.66e-16!358;CL:0002320!5.07e-16!365;CL:0000219!2.60e-14!390;CL:0000767!2.09e-13!3;CL:0000842!4.35e-13!3;CL:0000048!2.90e-12!430;CL:0000723!5.66e-12!436;CL:0000034!1.35e-11!444;CL:0000224!6.07e-10!4;CL:0000063!8.36e-07!578;CL:0000080!8.88e-07!6 | |ontology_enrichment_celltype=CL:0002057!2.68e-146!42;CL:0000860!5.09e-136!45;CL:0002194!2.77e-93!63;CL:0000576!2.77e-93!63;CL:0000040!2.77e-93!63;CL:0000559!2.77e-93!63;CL:0002009!3.25e-90!65;CL:0000766!2.11e-89!76;CL:0000839!2.67e-83!70;CL:0000557!4.95e-82!71;CL:0000763!2.70e-58!112;CL:0000049!2.70e-58!112;CL:0002087!3.54e-57!119;CL:0000738!2.21e-55!140;CL:0002031!2.26e-46!124;CL:0000037!1.43e-43!172;CL:0000566!1.43e-43!172;CL:0000988!1.01e-40!182;CL:0002032!4.30e-39!165;CL:0000837!4.30e-39!165;CL:0002393!4.80e-29!9;CL:0002397!4.80e-29!9;CL:0000134!1.66e-16!358;CL:0002320!5.07e-16!365;CL:0000219!2.60e-14!390;CL:0000767!2.09e-13!3;CL:0000842!4.35e-13!3;CL:0000048!2.90e-12!430;CL:0000723!5.66e-12!436;CL:0000034!1.35e-11!444;CL:0000224!6.07e-10!4;CL:0000063!8.36e-07!578;CL:0000080!8.88e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-114;33!CL:0002057;3.80e-114;33!CL:0000473;1.03e-76;39!CL:0000234;1.03e-76;39!CL:0000576;1.78e-70;48!CL:0000766;2.88e-38;69!CL:0002087;1.34e-17;104!CL:0000763;1.01e-15;100!CL:0000738;1.95e-11;136!CL:0002393;3.04e-11;6!CL:0002397;3.04e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.96e-124,42;CL:0002057,2.96e-124,42;CL:0000473,2.99e-108,48;CL:0000234,2.99e-108,48;CL:0002194,7.79e-86,59;CL:0000576,7.79e-86,59;CL:0000040,7.79e-86,59;CL:0000559,7.79e-86,59;CL:0002009,6.09e-83,61;CL:0000839,1.83e-76,66;CL:0000557,2.78e-75,67;CL:0000766,7.37e-70,72;CL:0000763,1.76e-45,108;CL:0000049,1.76e-45,108;CL:0002087,1.71e-42,115;CL:0002031,1.43e-40,120;CL:0000738,2.33e-35,136;CL:0002032,2.86e-29,161;CL:0000837,2.86e-29,161;CL:0000037,6.91e-28,168;CL:0000988,2.88e-26,177;CL:0000134,5.00e-11,354;CL:0002320,9.96e-11,361;CL:0000219,1.13e-09,386;CL:0000048,2.22e-08,427;CL:0000723,3.36e-08,433;CL:0000034,5.71e-08,441;CL:0002393,1.10e-07,9;CL:0002397,1.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-92;42!CL:0000049;2.09e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.00e-72!80;UBERON:0001474!1.66e-66!86;UBERON:0002390!1.26e-64!102;UBERON:0003061!1.26e-64!102;UBERON:0002193!3.57e-58!112;UBERON:0004765!1.53e-55!101;UBERON:0001434!1.53e-55!101;UBERON:0002405!7.30e-48!115;UBERON:0002204!1.57e-30!167;UBERON:0003081!2.81e-26!216;UBERON:0002384!2.33e-15!375;UBERON:0000926!5.61e-09!448;UBERON:0004120!5.61e-09!448;UBERON:0006603!5.61e-09!448 | |ontology_enrichment_uberon=UBERON:0002371!5.00e-72!80;UBERON:0001474!1.66e-66!86;UBERON:0002390!1.26e-64!102;UBERON:0003061!1.26e-64!102;UBERON:0002193!3.57e-58!112;UBERON:0004765!1.53e-55!101;UBERON:0001434!1.53e-55!101;UBERON:0002405!7.30e-48!115;UBERON:0002204!1.57e-30!167;UBERON:0003081!2.81e-26!216;UBERON:0002384!2.33e-15!375;UBERON:0000926!5.61e-09!448;UBERON:0004120!5.61e-09!448;UBERON:0006603!5.61e-09!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.00e-66,76;UBERON:0001474,5.70e-61,82;UBERON:0004765,2.90e-55,90;UBERON:0002405,2.25e-53,93;UBERON:0002390,1.77e-50,98;UBERON:0003061,1.77e-50,98;UBERON:0001434,2.13e-49,100;UBERON:0002193,1.76e-45,108;UBERON:0002204,4.46e-28,167;UBERON:0003081,2.18e-22,203;UBERON:0000926,6.23e-13,315;UBERON:0004120,6.23e-13,315;UBERON:0006603,6.23e-13,315;UBERON:0002384,2.55e-10,371 | |||
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|short_description=p@chr10:126004381..126004386,+ | |short_description=p@chr10:126004381..126004386,+ | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:126004381..126004386, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126004381..126004386, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.96e-124 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.96e-124 | 42 |
defensive cell | 2.99e-108 | 48 |
phagocyte | 2.99e-108 | 48 |
monopoietic cell | 7.79e-86 | 59 |
monocyte | 7.79e-86 | 59 |
monoblast | 7.79e-86 | 59 |
promonocyte | 7.79e-86 | 59 |
macrophage dendritic cell progenitor | 6.09e-83 | 61 |
myeloid lineage restricted progenitor cell | 1.83e-76 | 66 |
granulocyte monocyte progenitor cell | 2.78e-75 | 67 |
myeloid leukocyte | 7.37e-70 | 72 |
myeloid cell | 1.76e-45 | 108 |
common myeloid progenitor | 1.76e-45 | 108 |
nongranular leukocyte | 1.71e-42 | 115 |
hematopoietic lineage restricted progenitor cell | 1.43e-40 | 120 |
leukocyte | 2.33e-35 | 136 |
hematopoietic oligopotent progenitor cell | 2.86e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-29 | 161 |
hematopoietic stem cell | 6.91e-28 | 168 |
hematopoietic cell | 2.88e-26 | 177 |
mesenchymal cell | 5.00e-11 | 354 |
connective tissue cell | 9.96e-11 | 361 |
motile cell | 1.13e-09 | 386 |
multi fate stem cell | 2.22e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 5.71e-08 | 441 |
intermediate monocyte | 1.10e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.00e-66 | 76 |
bone element | 5.70e-61 | 82 |
skeletal element | 2.90e-55 | 90 |
immune system | 2.25e-53 | 93 |
hematopoietic system | 1.77e-50 | 98 |
blood island | 1.77e-50 | 98 |
skeletal system | 2.13e-49 | 100 |
hemolymphoid system | 1.76e-45 | 108 |
musculoskeletal system | 4.46e-28 | 167 |
lateral plate mesoderm | 2.18e-22 | 203 |
mesoderm | 6.23e-13 | 315 |
mesoderm-derived structure | 6.23e-13 | 315 |
presumptive mesoderm | 6.23e-13 | 315 |
connective tissue | 2.55e-10 | 371 |