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FFCP PHASE1:Mm9::chr6:115202281..115202317,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110595
|EntrezGene=110595
|HGNC=
|HGNC=
|MCL_coexpression_id=270
|TSSclassifier=NA
|UniProt=Q9JHB3,Q3USH7
|UniProt=Q9JHB3,Q3USH7
|association_with_transcript=-414bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end
|association_with_transcript=-414bp_to_ENSMUST00000032462,NM_080639,uc009dip.1,uc009diq.1_5end
|cluster_id=chr6:115202281..115202317,-
|description=CAGE_peak_2_at_Timp4_5end
|description=CAGE_peak_2_at_Timp4_5end
|id=chr6:115202281..115202317,-
|id=chr6:115202281..115202317,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002319,6.32e-08,43;CL:0000221,1.24e-07,44;CL:0000133,1.24e-07,44;CL:0002453,1.49e-07,8;CL:0000117,1.72e-07,23;CL:0000337,1.72e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.25e-13!52;UBERON:0005068!1.25e-13!52;UBERON:0006241!1.25e-13!52;UBERON:0007135!1.25e-13!52;UBERON:0001017!3.70e-13!73;UBERON:0005743!3.70e-13!73;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002616!4.88e-12!49;UBERON:0004121!9.14e-12!102;UBERON:0000924!9.14e-12!102;UBERON:0006601!9.14e-12!102;UBERON:0002020!2.09e-11!34;UBERON:0002346!1.42e-09!71;UBERON:0003075!1.42e-09!71;UBERON:0007284!1.42e-09!71;UBERON:0000033!4.56e-09!63;UBERON:0003076!1.29e-08!12;UBERON:0003057!1.29e-08!12;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10;UBERON:0003080!2.46e-07!40;UBERON:0004111!5.04e-07!122;UBERON:0000025!6.68e-07!114;UBERON:0002780!9.00e-07!39;UBERON:0001890!9.00e-07!39;UBERON:0006240!9.00e-07!39
|ontology_enrichment_uberon=UBERON:0001049!1.25e-13!52;UBERON:0005068!1.25e-13!52;UBERON:0006241!1.25e-13!52;UBERON:0007135!1.25e-13!52;UBERON:0001017!3.70e-13!73;UBERON:0005743!3.70e-13!73;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0000073!2.86e-12!75;UBERON:0001016!2.86e-12!75;UBERON:0002616!4.88e-12!49;UBERON:0004121!9.14e-12!102;UBERON:0000924!9.14e-12!102;UBERON:0006601!9.14e-12!102;UBERON:0002020!2.09e-11!34;UBERON:0002346!1.42e-09!71;UBERON:0003075!1.42e-09!71;UBERON:0007284!1.42e-09!71;UBERON:0000033!4.56e-09!63;UBERON:0003076!1.29e-08!12;UBERON:0003057!1.29e-08!12;UBERON:0002791!1.57e-08!29;UBERON:0003528!1.57e-08!29;UBERON:0001893!1.57e-08!29;UBERON:0002021!2.02e-07!10;UBERON:0000411!2.02e-07!10;UBERON:0001950!2.02e-07!10;UBERON:0003080!2.46e-07!40;UBERON:0004111!5.04e-07!122;UBERON:0000025!6.68e-07!114;UBERON:0002780!9.00e-07!39;UBERON:0001890!9.00e-07!39;UBERON:0006240!9.00e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-26,54;UBERON:0001017,4.54e-25,73;UBERON:0001016,4.38e-24,75;UBERON:0001049,8.26e-24,52;UBERON:0005068,8.26e-24,52;UBERON:0006241,8.26e-24,52;UBERON:0007135,8.26e-24,52;UBERON:0000955,3.29e-19,47;UBERON:0006238,3.29e-19,47;UBERON:0002020,3.57e-19,34;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0002616,2.55e-18,46;UBERON:0002346,1.66e-17,64;UBERON:0003075,1.66e-17,64;UBERON:0007284,1.66e-17,64;UBERON:0010371,2.99e-15,73;UBERON:0003528,5.01e-15,29;UBERON:0002791,5.01e-15,29;UBERON:0001893,5.01e-15,29;UBERON:0010314,8.33e-15,92;UBERON:0003080,9.35e-14,40;UBERON:0002780,1.18e-12,39;UBERON:0001890,1.18e-12,39;UBERON:0006240,1.18e-12,39;UBERON:0002021,1.36e-12,10;UBERON:0000411,1.36e-12,10;UBERON:0001950,1.36e-12,10;UBERON:0004111,2.10e-12,122;UBERON:0003076,7.99e-12,12;UBERON:0003057,7.99e-12,12;UBERON:0000025,1.17e-11,114;UBERON:0002619,2.82e-11,17;UBERON:0000956,3.71e-10,21;UBERON:0001869,3.71e-10,21;UBERON:0000203,3.71e-10,21;UBERON:0003056,4.74e-10,49;UBERON:0002950,1.67e-07,4;UBERON:0001891,1.67e-07,4;UBERON:0009616,1.67e-07,4;UBERON:0010286,1.67e-07,4;UBERON:0002240,4.28e-07,6;UBERON:0005174,4.28e-07,6;UBERON:0001137,4.28e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,2.39827672018491,2.19686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,6.14749288514487,0,0,0,12.5686433137674,12.1477697523387,0,0,0,6.60695285996332,7.91661496128164,8.44835932909339,0.395658863190582,0.182975287204819,1.04182674111352,15.0758819460746,7.87867654044352,7.48711414106369,2.94628585473668,5.26775218956681,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0.251333182659351,0,3.32578520915797,0,0.161766849947409,1.98757366614354,1.93950101254089,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,8.53806644607489,5.49000723382352,1.00523481690292,5.38855392596057,2.81287003063364,8.72709787150152,6.81413304884582,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,1.28441876603886,0.16455984991348,0.656669856316381,2.67527071501324,2.63159977365598,1.09775057645525,6.1734952629771,5.67782861123144,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,9.63303539926752,9.61135830056066,0,5.30188947129183,0,0,0,0,0,0,0,0,0,1.60660658210904,3.69044221541498,0,0,4.61916344323099,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.42366414172764,1.10264199027481,0.32977250588296,1.61464426695906,0.180938774784468,0.596861720015682,0.820704498725306,0,15.2048747648618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.228620419965,0,0,0,0.467507608726276,1.58711268530648,0,0,0,1.15913756419314,0,0.183151624267265,0.214368379079066,0,1.6942555278512,3.68260189205742,2.29158205375759,6.35856774671644,2.74033007908257,2.2661816921691,3.37511250115903,2.70192721934532,5.43770890781046,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.282328141245992,0.676916863133412,0.548783918618318,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.689531376628944,1.22769312950907,1.08455788830176,0.385813221962283,0.499621155875892,1.16965804222704,1.93383948643468,4.3996316375834,1.10295709559758,0.695603506861264
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,2.39827672018491,2.19686182734472,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0,0,0,0,0,0,1.79760066311043,6.14749288514487,0,0,0,12.5686433137674,12.1477697523387,0,0,0,6.60695285996332,7.91661496128164,8.44835932909339,0.395658863190582,0.182975287204819,1.04182674111352,15.0758819460746,7.87867654044352,7.48711414106369,2.94628585473668,5.26775218956681,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.470354828542819,0.251333182659351,0,3.32578520915797,0,0.161766849947409,1.98757366614354,1.93950101254089,0,0.292780797011547,1.25668024088073,0.255457055208591,0,0,0,8.53806644607489,5.49000723382352,1.00523481690292,5.38855392596057,2.81287003063364,8.72709787150152,6.81413304884582,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,1.28441876603886,0.16455984991348,0.656669856316381,2.67527071501324,2.63159977365598,1.09775057645525,6.1734952629771,5.67782861123144,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.827810238914197,9.63303539926752,9.61135830056066,0,5.30188947129183,0,0,0,0,0,0,0,0,0,1.60660658210904,3.69044221541498,0,0,4.61916344323099,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0.42366414172764,1.10264199027481,0.32977250588296,1.61464426695906,0.180938774784468,0.596861720015682,0.820704498725306,0,15.2048747648618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.864090018773596,0.316011120628178,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.228620419965,0,0,0,0.467507608726276,1.58711268530648,0,0,0,1.15913756419314,0,0.183151624267265,0.214368379079066,0,1.6942555278512,3.68260189205742,2.29158205375759,6.35856774671644,2.74033007908257,2.2661816921691,3.37511250115903,2.70192721934532,5.43770890781046,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.561849044819294,0.448176066834085,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,0.887379030796687,0.953744759789284,0.581385666529314,0.282328141245992,0.676916863133412,0.548783918618318,0.789209134313529,0.814824683075171,1.12228454331548,0.593175090620871,0.689531376628944,1.22769312950907,1.08455788830176,0.385813221962283,0.499621155875892,1.16965804222704,1.93383948643468,4.3996316375834,1.10295709559758,0.695603506861264
|short_description=p2@Timp4
|short_description=p2@Timp4
}}
}}

Latest revision as of 11:55, 26 September 2015

Short description:p2@Timp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Timp4_5end
Coexpression cluster:MCL_coexpression_mm9:270
Association with transcript: -414bp_to_ENSMUST00000032462, NM_080639, uc009dip.1, uc009diq.1_5end
EntrezGene:Timp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Timp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B26.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell6.32e-0843
ectodermal cell1.24e-0744
neurectodermal cell1.24e-0744
oligodendrocyte precursor cell1.49e-078
CNS neuron (sensu Vertebrata)1.72e-0723
neuroblast (sensu Vertebrata)1.72e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.58e-2654
central nervous system4.54e-2573
nervous system4.38e-2475
neural tube8.26e-2452
neural rod8.26e-2452
future spinal cord8.26e-2452
neural keel8.26e-2452
brain3.29e-1947
future brain3.29e-1947
gray matter3.57e-1934
ectoderm-derived structure1.06e-1895
ectoderm1.06e-1895
presumptive ectoderm1.06e-1895
regional part of brain2.55e-1846
neurectoderm1.66e-1764
neural plate1.66e-1764
presumptive neural plate1.66e-1764
ecto-epithelium2.99e-1573
brain grey matter5.01e-1529
regional part of telencephalon5.01e-1529
telencephalon5.01e-1529
structure with developmental contribution from neural crest8.33e-1592
anterior neural tube9.35e-1440
regional part of forebrain1.18e-1239
forebrain1.18e-1239
future forebrain1.18e-1239
occipital lobe1.36e-1210
visual cortex1.36e-1210
neocortex1.36e-1210
anatomical conduit2.10e-12122
posterior neural tube7.99e-1212
chordal neural plate7.99e-1212
tube1.17e-11114
regional part of cerebral cortex2.82e-1117
cerebral cortex3.71e-1021
cerebral hemisphere3.71e-1021
pallium3.71e-1021
pre-chordal neural plate4.74e-1049
regional part of midbrain1.67e-074
midbrain1.67e-074
presumptive midbrain1.67e-074
midbrain neural tube1.67e-074
spinal cord4.28e-076
dorsal region element4.28e-076
dorsum4.28e-076
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