FFCP PHASE1:Hg19::chr10:977581..977592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23185 | |EntrezGene=23185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28987 | |HGNC=28987 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCU2 | |UniProt=B5MCU2 | ||
|association_with_transcript=-17bp_to_ENST00000406525_5end | |association_with_transcript=-17bp_to_ENST00000406525_5end | ||
|cluster_id=chr10:977581..977592,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_LARP4B_5end | |description=CAGE_peak_4_at_LARP4B_5end | ||
|id=chr10:977581..977592,- | |id=chr10:977581..977592,- | ||
|ontology_enrichment_celltype=CL:0000766!2.47e-34!76;CL:0000557!1.25e-33!71;CL:0002009!4.03e-32!65;CL:0000763!1.87e-31!112;CL:0000049!1.87e-31!112;CL:0000037!1.97e-31!172;CL:0000566!1.97e-31!172;CL:0000839!4.48e-31!70;CL:0002194!5.78e-31!63;CL:0000576!5.78e-31!63;CL:0000040!5.78e-31!63;CL:0000559!5.78e-31!63;CL:0000738!8.13e-31!140;CL:0000988!4.96e-29!182;CL:0002032!3.17e-28!165;CL:0000837!3.17e-28!165;CL:0002057!7.48e-27!42;CL:0000860!2.56e-26!45;CL:0002031!2.45e-25!124;CL:0002087!2.66e-25!119;CL:0000134!3.08e-09!358;CL:0002320!2.98e-08!365;CL:0000219!7.98e-08!390 | |ontology_enrichment_celltype=CL:0000766!2.47e-34!76;CL:0000557!1.25e-33!71;CL:0002009!4.03e-32!65;CL:0000763!1.87e-31!112;CL:0000049!1.87e-31!112;CL:0000037!1.97e-31!172;CL:0000566!1.97e-31!172;CL:0000839!4.48e-31!70;CL:0002194!5.78e-31!63;CL:0000576!5.78e-31!63;CL:0000040!5.78e-31!63;CL:0000559!5.78e-31!63;CL:0000738!8.13e-31!140;CL:0000988!4.96e-29!182;CL:0002032!3.17e-28!165;CL:0000837!3.17e-28!165;CL:0002057!7.48e-27!42;CL:0000860!2.56e-26!45;CL:0002031!2.45e-25!124;CL:0002087!2.66e-25!119;CL:0000134!3.08e-09!358;CL:0002320!2.98e-08!365;CL:0000219!7.98e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.75e-33;33!CL:0002057;2.75e-33;33!CL:0000473;3.16e-30;39!CL:0000234;3.16e-30;39!CL:0000576;1.20e-28;48!CL:0000766;1.69e-23;69!CL:0000763;2.05e-12;100!CL:0000738;9.30e-11;136!CL:0002087;2.96e-10;104!CL:0000840;2.94e-07;5!CL:0000988;5.92e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.41e-55,72;CL:0000557,9.39e-53,67;CL:0002009,2.35e-52,61;CL:0002194,2.03e-50,59;CL:0000576,2.03e-50,59;CL:0000040,2.03e-50,59;CL:0000559,2.03e-50,59;CL:0000839,2.20e-47,66;CL:0000473,3.61e-46,48;CL:0000234,3.61e-46,48;CL:0000738,4.06e-44,136;CL:0000860,8.83e-44,42;CL:0002057,8.83e-44,42;CL:0000763,1.09e-43,108;CL:0000049,1.09e-43,108;CL:0000037,3.05e-41,168;CL:0000988,2.66e-38,177;CL:0002087,2.30e-37,115;CL:0002032,5.49e-37,161;CL:0000837,5.49e-37,161;CL:0002031,1.94e-35,120;CL:0000134,1.18e-12,354;CL:0002320,9.57e-12,361;CL:0000219,9.33e-10,386;CL:0002393,7.19e-09,9;CL:0002397,7.19e-09,9;CL:0000840,3.69e-07,5;CL:0001029,3.69e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-31;42!CL:0000049;6.47e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-29!102;UBERON:0003061!1.70e-29!102;UBERON:0002371!1.59e-27!80;UBERON:0002193!6.53e-27!112;UBERON:0001474!6.86e-25!86;UBERON:0002405!3.27e-21!115;UBERON:0004765!1.21e-19!101;UBERON:0001434!1.21e-19!101;UBERON:0002384!1.80e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.90e-46,98;UBERON:0003061,5.90e-46,98;UBERON:0002371,2.88e-45,76;UBERON:0001474,2.13e-41,82;UBERON:0002193,5.43e-39,108;UBERON:0002405,2.99e-36,93;UBERON:0004765,1.83e-35,90;UBERON:0001434,2.29e-30,100;UBERON:0003081,9.29e-16,203;UBERON:0002204,9.11e-11,167;UBERON:0002384,1.58e-10,371;UBERON:0000926,3.40e-07,315;UBERON:0004120,3.40e-07,315;UBERON:0006603,3.40e-07,315 | |||
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| ||
|short_description=p4@LARP4B | |short_description=p4@LARP4B | ||
}} | }} |
Latest revision as of 04:19, 20 September 2015
Short description: | p4@LARP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LARP4B_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -17bp_to_ENST00000406525_5end |
EntrezGene: | LARP4B |
HGNC: | 28987 |
UniProt: | B5MCU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.41e-55 | 72 |
granulocyte monocyte progenitor cell | 9.39e-53 | 67 |
macrophage dendritic cell progenitor | 2.35e-52 | 61 |
monopoietic cell | 2.03e-50 | 59 |
monocyte | 2.03e-50 | 59 |
monoblast | 2.03e-50 | 59 |
promonocyte | 2.03e-50 | 59 |
myeloid lineage restricted progenitor cell | 2.20e-47 | 66 |
defensive cell | 3.61e-46 | 48 |
phagocyte | 3.61e-46 | 48 |
leukocyte | 4.06e-44 | 136 |
classical monocyte | 8.83e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.83e-44 | 42 |
myeloid cell | 1.09e-43 | 108 |
common myeloid progenitor | 1.09e-43 | 108 |
hematopoietic stem cell | 3.05e-41 | 168 |
hematopoietic cell | 2.66e-38 | 177 |
nongranular leukocyte | 2.30e-37 | 115 |
hematopoietic oligopotent progenitor cell | 5.49e-37 | 161 |
hematopoietic multipotent progenitor cell | 5.49e-37 | 161 |
hematopoietic lineage restricted progenitor cell | 1.94e-35 | 120 |
mesenchymal cell | 1.18e-12 | 354 |
connective tissue cell | 9.57e-12 | 361 |
motile cell | 9.33e-10 | 386 |
intermediate monocyte | 7.19e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.19e-09 | 9 |
immature conventional dendritic cell | 3.69e-07 | 5 |
common dendritic progenitor | 3.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.90e-46 | 98 |
blood island | 5.90e-46 | 98 |
bone marrow | 2.88e-45 | 76 |
bone element | 2.13e-41 | 82 |
hemolymphoid system | 5.43e-39 | 108 |
immune system | 2.99e-36 | 93 |
skeletal element | 1.83e-35 | 90 |
skeletal system | 2.29e-30 | 100 |
lateral plate mesoderm | 9.29e-16 | 203 |
musculoskeletal system | 9.11e-11 | 167 |
connective tissue | 1.58e-10 | 371 |
mesoderm | 3.40e-07 | 315 |
mesoderm-derived structure | 3.40e-07 | 315 |
presumptive mesoderm | 3.40e-07 | 315 |