FFCP PHASE1:Hg19::chr10:105001799..105001810,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:105001799..105001810,+
|short_description=p@chr10:105001799..105001810,+
|description=CAGE_peak_at_chr10:105001799..105001810,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105001799..105001810,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:105001799..105001810,+ | |||
|id=chr10:105001799..105001810,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.75e-89!42;CL:0000860!1.08e-82!45;CL:0002194!1.35e-56!63;CL:0000576!1.35e-56!63;CL:0000040!1.35e-56!63;CL:0000559!1.35e-56!63;CL:0002009!1.01e-54!65;CL:0000839!1.69e-50!70;CL:0000557!1.01e-49!71;CL:0000766!3.75e-46!76;CL:0002087!3.88e-30!119;CL:0000763!9.30e-30!112;CL:0000049!9.30e-30!112;CL:0002031!2.18e-26!124;CL:0000738!7.82e-25!140;CL:0000037!3.20e-19!172;CL:0000566!3.20e-19!172;CL:0002032!1.52e-18!165;CL:0000837!1.52e-18!165;CL:0000988!7.20e-18!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-95;33!CL:0002057;1.60e-95;33!CL:0000473;1.48e-65;39!CL:0000234;1.48e-65;39!CL:0000576;3.02e-43;48!CL:0000766;7.58e-24;69!CL:0000763;7.60e-16;100!CL:0002087;2.50e-15;104!CL:0000738;9.66e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.43e-83,42;CL:0002057,9.43e-83,42;CL:0000473,3.51e-72,48;CL:0000234,3.51e-72,48;CL:0002194,2.26e-57,59;CL:0000576,2.26e-57,59;CL:0000040,2.26e-57,59;CL:0000559,2.26e-57,59;CL:0002009,1.84e-55,61;CL:0000839,3.52e-51,66;CL:0000557,2.12e-50,67;CL:0000766,8.15e-47,72;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002087,1.02e-28,115;CL:0002031,1.90e-27,120;CL:0000738,5.34e-24,136;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.16e-59;42!CL:0000049;8.72e-10;108 | |||
|ontology_enrichment_disease=DOID:3151!5.78e-07!1;DOID:3149!5.78e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.30e-43!80;UBERON:0001474!3.06e-40!86;UBERON:0002390!5.18e-36!102;UBERON:0003061!5.18e-36!102;UBERON:0004765!1.53e-33!101;UBERON:0001434!1.53e-33!101;UBERON:0002193!2.42e-32!112;UBERON:0002405!7.52e-29!115;UBERON:0002204!2.93e-18!167;UBERON:0003081!3.34e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-44,76;UBERON:0001474,6.12e-41,82;UBERON:0004765,3.63e-37,90;UBERON:0002405,6.45e-36,93;UBERON:0002390,5.31e-34,98;UBERON:0003061,5.31e-34,98;UBERON:0001434,2.74e-33,100;UBERON:0002193,1.07e-30,108;UBERON:0002204,3.55e-19,167;UBERON:0003081,2.10e-15,203;UBERON:0000926,4.02e-09,315;UBERON:0004120,4.02e-09,315;UBERON:0006603,4.02e-09,315;UBERON:0002384,2.22e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,2.3015391385772,1.2808035326455,5.43909128743746,3.7922024881028,2.5819387343353,1.35426486594342,0.188242339542605,0,0.898893937780338,6.42776173978895,5.77672248736969,3.19668562899521,0.329851300186716,1.39624560335142,0,3.19230162491442,0,5.60540024096017,1.50749199154046,1.5644487552606,2.82345498116652,1.81619850790011,4.41933163185078,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.929119112685311,2.3015391385772,1.2808035326455,5.43909128743746,3.7922024881028,2.5819387343353,1.35426486594342,0.188242339542605,0,0.898893937780338,6.42776173978895,5.77672248736969,3.19668562899521,0.329851300186716,1.39624560335142,0,3.19230162491442,0,5.60540024096017,1.50749199154046,1.5644487552606,2.82345498116652,1.81619850790011,4.41933163185078,5.37986058649504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:105001799..105001810,+ | |||
}} | }} |
Latest revision as of 09:56, 23 July 2015
Short description: | p@chr10:105001799..105001810, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105001799..105001810, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.43e-83 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.43e-83 | 42 |
defensive cell | 3.51e-72 | 48 |
phagocyte | 3.51e-72 | 48 |
monopoietic cell | 2.26e-57 | 59 |
monocyte | 2.26e-57 | 59 |
monoblast | 2.26e-57 | 59 |
promonocyte | 2.26e-57 | 59 |
macrophage dendritic cell progenitor | 1.84e-55 | 61 |
myeloid lineage restricted progenitor cell | 3.52e-51 | 66 |
granulocyte monocyte progenitor cell | 2.12e-50 | 67 |
myeloid leukocyte | 8.15e-47 | 72 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
nongranular leukocyte | 1.02e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.90e-27 | 120 |
leukocyte | 5.34e-24 | 136 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.78e-44 | 76 |
bone element | 6.12e-41 | 82 |
skeletal element | 3.63e-37 | 90 |
immune system | 6.45e-36 | 93 |
hematopoietic system | 5.31e-34 | 98 |
blood island | 5.31e-34 | 98 |
skeletal system | 2.74e-33 | 100 |
hemolymphoid system | 1.07e-30 | 108 |
musculoskeletal system | 3.55e-19 | 167 |
lateral plate mesoderm | 2.10e-15 | 203 |
mesoderm | 4.02e-09 | 315 |
mesoderm-derived structure | 4.02e-09 | 315 |
presumptive mesoderm | 4.02e-09 | 315 |
connective tissue | 2.22e-07 | 371 |