FFCP PHASE1:Hg19::chr10:111683183..111683277,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:111683183..111683277,-
|short_description=p1@XPNPEP1
|description=CAGE_peak_1_at_XPNPEP1_5end
|association_with_transcript=0bp_to_ENST00000369683,ENST0000...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7511 | |EntrezGene=7511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12822 | |HGNC=12822 | ||
|UniProt=Q5T6H7, | |TSSclassifier=strong | ||
|UniProt=Q5T6H7,Q5T6H2,Q9NQW7 | |||
|association_with_transcript=0bp_to_ENST00000369683,ENST00000403138,ENST00000430337,ENST00000443078,ENST00000451592,ENST00000460523,ENST00000490740,ENST00000506777,uc001kyp.1,uc001kyq.1,uc009xxt.1,uc010qrb.1_5end | |||
|cluster_id=chr10:111683183..111683277,- | |||
|description=CAGE_peak_1_at_XPNPEP1_5end | |||
|id=chr10:111683183..111683277,- | |||
|ontology_enrichment_celltype=CL:0002371!2.26e-31!591;CL:0000144!3.81e-30!625;CL:0000012!7.18e-22!682;CL:0000548!2.69e-21!679;CL:0000004!2.69e-21!679;CL:0000255!2.69e-21!679;CL:0000055!2.74e-14!180;CL:0000723!2.94e-14!436;CL:0000048!3.16e-14!430;CL:0000003!1.06e-13!722;CL:0000034!2.32e-13!444;CL:0000183!3.83e-12!59;CL:0000222!1.71e-11!119;CL:0000187!2.70e-11!54;CL:0000680!5.00e-11!57;CL:0000056!5.00e-11!57;CL:0000355!5.00e-11!57;CL:0002139!4.67e-10!24;CL:0000359!5.87e-10!32;CL:0000192!7.34e-10!42;CL:0000514!7.34e-10!42;CL:0000393!9.74e-09!60;CL:0000211!9.74e-09!60;CL:0000220!9.70e-08!246;CL:0002321!3.56e-07!248;CL:0000063!8.19e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.56e-10;24!CL:0000359;1.85e-09;32!CL:0000192;3.55e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,8.26e-15,433;CL:0000048,8.85e-15,427;CL:0000034,6.86e-14,441;CL:0000222,7.80e-12,121;CL:0000187,2.68e-11,55;CL:0000680,4.89e-11,58;CL:0000056,4.89e-11,58;CL:0000355,4.89e-11,58;CL:0002139,4.67e-10,24;CL:0000359,5.87e-10,32;CL:0000192,7.49e-10,43;CL:0000514,7.49e-10,43;CL:0000393,9.12e-09,61;CL:0000211,9.12e-09,61;CL:0002321,2.00e-07,250;CL:0002320,5.45e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;3.55e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.98e-18!79;UBERON:0007798!3.98e-18!79;UBERON:0004872!8.69e-17!84;UBERON:0000055!9.37e-16!69;UBERON:0004535!1.20e-13!110;UBERON:0001981!1.80e-13!60;UBERON:0007500!1.80e-13!60;UBERON:0004537!1.80e-13!60;UBERON:0006965!1.80e-13!60;UBERON:0001637!2.99e-13!42;UBERON:0003509!2.99e-13!42;UBERON:0004572!2.99e-13!42;UBERON:0001009!8.73e-13!113;UBERON:0004573!9.23e-11!33;UBERON:0004571!9.23e-11!33;UBERON:0001134!2.72e-09!61;UBERON:0002036!2.72e-09!61;UBERON:0003082!2.72e-09!61;UBERON:0003081!4.82e-09!216;UBERON:0002385!6.31e-09!63;UBERON:0001015!6.31e-09!63;UBERON:0000383!6.31e-09!63;UBERON:0003914!8.93e-09!118;UBERON:0002204!1.52e-08!167;UBERON:0000914!1.71e-07!83;UBERON:0002329!1.71e-07!83;UBERON:0003077!1.71e-07!83;UBERON:0003059!1.71e-07!83;UBERON:0007282!1.71e-07!83;UBERON:0009618!1.71e-07!83;UBERON:0007285!1.71e-07!83;UBERON:0000490!1.75e-07!138;UBERON:0004290!2.16e-07!70;UBERON:0000486!2.55e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.50e-10;42!UBERON:0003509;4.50e-10;42!UBERON:0004572;4.50e-10;42!UBERON:0004573;7.59e-10;33!UBERON:0004571;7.59e-10;33!UBERON:0007500;2.62e-09;56!UBERON:0001981;2.62e-09;56!UBERON:0004537;2.62e-09;56!UBERON:0000055;3.31e-09;65!UBERON:0002049;3.90e-09;75!UBERON:0007798;3.90e-09;75!UBERON:0000947;9.51e-07;21!UBERON:0010191;9.51e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.45e-18,78;UBERON:0007798,2.45e-18,78;UBERON:0004872,5.71e-17,83;UBERON:0000055,5.77e-16,68;UBERON:0004535,9.28e-14,109;UBERON:0007500,1.12e-13,59;UBERON:0001981,1.12e-13,59;UBERON:0004537,1.12e-13,59;UBERON:0006965,1.12e-13,59;UBERON:0001637,2.99e-13,42;UBERON:0003509,2.99e-13,42;UBERON:0004572,2.99e-13,42;UBERON:0001009,6.94e-13,112;UBERON:0004573,9.23e-11,33;UBERON:0004571,9.23e-11,33;UBERON:0002204,1.54e-10,167;UBERON:0000926,4.94e-10,315;UBERON:0004120,4.94e-10,315;UBERON:0006603,4.94e-10,315;UBERON:0001134,2.56e-09,62;UBERON:0002036,2.56e-09,62;UBERON:0003082,2.56e-09,62;UBERON:0003081,3.57e-09,203;UBERON:0002385,5.89e-09,64;UBERON:0001015,5.89e-09,64;UBERON:0000383,5.89e-09,64;UBERON:0003914,1.00e-08,117;UBERON:0002329,1.96e-07,71;UBERON:0003059,1.96e-07,71;UBERON:0007282,1.96e-07,71;UBERON:0004290,1.96e-07,71;UBERON:0009618,1.96e-07,71;UBERON:0000486,2.30e-07,83;UBERON:0003077,4.24e-07,72;UBERON:0007285,4.24e-07,72;UBERON:0007503,5.65e-07,78;UBERON:0007524,7.07e-07,73 | |||
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0951437534136 | ||
|short_description=p1@XPNPEP1 | |||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p1@XPNPEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XPNPEP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369683, ENST00000403138, ENST00000430337, ENST00000443078, ENST00000451592, ENST00000460523, ENST00000490740, ENST00000506777, uc001kyp.1, uc001kyq.1, uc009xxt.1, uc010qrb.1_5end |
EntrezGene: | XPNPEP1 |
HGNC: | 12822 |
UniProt: | Q5T6H7Q5T6H2Q9NQW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 8.26e-15 | 433 |
multi fate stem cell | 8.85e-15 | 427 |
stem cell | 6.86e-14 | 441 |
mesodermal cell | 7.80e-12 | 121 |
muscle cell | 2.68e-11 | 55 |
muscle precursor cell | 4.89e-11 | 58 |
myoblast | 4.89e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-11 | 58 |
endothelial cell of vascular tree | 4.67e-10 | 24 |
vascular associated smooth muscle cell | 5.87e-10 | 32 |
smooth muscle cell | 7.49e-10 | 43 |
smooth muscle myoblast | 7.49e-10 | 43 |
electrically responsive cell | 9.12e-09 | 61 |
electrically active cell | 9.12e-09 | 61 |
embryonic cell | 2.00e-07 | 250 |
connective tissue cell | 5.45e-07 | 361 |