FFCP PHASE1:Hg19::chr10:135075417..135075435,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:135075417..135075435,-
|short_description=p@chr10:135075417..135075435,-
|description=CAGE_peak_at_chr10:135075417..135075435,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:135075417..135075435,- | |||
|description=CAGE_peak_at_chr10:135075417..135075435,- | |||
|id=chr10:135075417..135075435,- | |||
|ontology_enrichment_celltype=CL:0000860!1.89e-15!45;CL:0000766!2.96e-15!76;CL:0000557!5.25e-14!71;CL:0002057!6.26e-14!42;CL:0002009!2.79e-13!65;CL:0000839!6.72e-13!70;CL:0002194!1.16e-12!63;CL:0000576!1.16e-12!63;CL:0000040!1.16e-12!63;CL:0000559!1.16e-12!63;CL:0000763!6.21e-12!112;CL:0000049!6.21e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0002393;8.57e-23;6!CL:0002397;8.57e-23;6!CL:0000766;8.30e-14;69!CL:0000576;2.06e-13;48!CL:0000094;3.19e-12;8!CL:0000767;3.59e-12;3!CL:0000860;8.26e-09;33!CL:0002057;8.26e-09;33!CL:0000081;8.59e-09;11!CL:0000097;4.59e-08;5!CL:0000163;2.50e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.02e-26,72;CL:0000860,2.26e-19,42;CL:0002057,2.26e-19,42;CL:0000839,5.91e-18,66;CL:0000557,1.29e-17,67;CL:0000763,2.50e-17,108;CL:0000049,2.50e-17,108;CL:0000473,1.81e-16,48;CL:0000234,1.81e-16,48;CL:0002393,7.08e-15,9;CL:0002397,7.08e-15,9;CL:0002194,3.87e-14,59;CL:0000576,3.87e-14,59;CL:0000040,3.87e-14,59;CL:0000559,3.87e-14,59;CL:0000738,9.94e-14,136;CL:0002009,1.49e-13,61;CL:0000094,4.43e-12,8;CL:0000767,5.95e-12,3;CL:0000037,6.88e-11,168;CL:0000988,5.23e-10,177;CL:0002032,1.29e-09,161;CL:0000837,1.29e-09,161;CL:0000081,1.08e-08,11;CL:0000097,4.46e-08,5;CL:0002028,4.46e-08,5;CL:0002031,7.85e-08,120;CL:0000163,2.64e-07,9;CL:0002087,3.20e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.52e-11!80;UBERON:0001474!4.21e-11!86;UBERON:0002390!1.73e-09!102;UBERON:0003061!1.73e-09!102;UBERON:0004765!1.03e-08!101;UBERON:0001434!1.03e-08!101;UBERON:0002193!2.45e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.31e-16,98;UBERON:0003061,4.31e-16,98;UBERON:0002371,5.55e-15,76;UBERON:0002193,4.44e-14,108;UBERON:0001474,1.51e-13,82;UBERON:0003081,2.36e-12,203;UBERON:0004765,6.20e-12,90;UBERON:0002405,2.11e-11,93;UBERON:0001434,2.76e-10,100;UBERON:0000926,7.97e-08,315;UBERON:0004120,7.97e-08,315;UBERON:0006603,7.97e-08,315;UBERON:0002204,2.93e-07,167 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0,0.547497700291537,0.125542639594803,0,0,0.314843125254717,1.18009283054671,1.15148819429164,3.40595471295367,0,0.6024118375565,0,0.0774672005803016,0.142169232487422,0.293600439334847,2.76997704265939,2.4065333696417,2.17010870715852,0.223915474239924,0,0.257575567634187,1.45398238779565,1.88937971844405,1.21292030593908,0.464858073811369,0.822335776043652,0.619412741790207,0,0.256160706529101,0.47296445977717,0.689491361473237,1.93645405075148,0,0.941211697713023,0.545812300115692,0.898893937780338,1.22433556948361,0,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0,1.26584954976354,1.05627643155971,1.06302149982522,1.67726916406701,1.57260083605093,2.70318407114711,2.08943262706204,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.255725123687061,0.361439152384566,0,0,0,1.45990461090791,0,0,0.087834785693126,0.392937226493138,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0.469737994575059,0.323745888736263,0.280901613404497,0,0.491337269247072,0.309977343527296,0,0.494533858557114,0,0,0,0.375355559615893,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0.710019185033229,0,0,0,0.272746120590835,0,0.243947412259191,0.265059536642971,0,0.310983165046111,0.252320850875628,0.36497735907583,1.56449532329816,0,2.76269842704961,0,0,0.354920400119532,0,0.482022059766964,0.220587945464788,0.653638332277218,0.237270619111097,0.808987848960987,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0.468008530278475,0.297262324577456,0,0.335964256397719,0,0,0,0.383382679165211,0,0.088048434013226,7.25648404392702,2.59415916150531,7.06957627187728,0.190493682876507,1.14596527667483,1.17217447210047,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0.129271715757778,0,0,0,2.08014873822732,0,0,0,0.142977993658148,0,0,0,0.710783897485092,0.791951872933429,0,0,0.599837947092342,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,1.27587750330633,2.24702107184155,0,7.87389475528467,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0,0.173767228936166,0.391602314925481,0,0,1.72571360654893,1.17400313583789,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.206082023295445,0.366277859273374,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0,0.340906509664404,0.0890320356467374,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,1.3940745403212,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.404364963146632,0,1.68503382495592,0,0,0,0.409499734223957,0.424216295861138,0,0,0.66343897524122,0,0,0,0,1.54911749049875,0.281695602532241,0,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0,0.75894634753143,0,0.0962221127255121,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.238231775457789,0,0,1.08006287447623,0,0.106824071127473,0,0.735120647943095,0,0.144269212976445,0,0.159426272728822,0.798317485731266,0,0.423347165447766,0,0,0.684704037099577,0,0,0.169291777801603,0.642352300414798,0.403599414382095,0,0.343505344755765,0,0.223676107892416,1.16794399198336,0.390776190804081,0,0,0,0,0,0.37428108081644,0,0.36408156524854,0.222886768554957,0,0.23874448473769,0,0,0,0,0.222617410045812,0.16480387422676,0.63337622438398,0.19924798825107,0,0,0.409074730008619,0,0.311039587661807,0.179736702294654,0.716084698702437,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0.262379999988587,0.724999575434793,0.455173793141999,0.254253650292766,0.472775363535873,0,0.291604613383254,0,0,0,1.52581736317083,0.110579259931225,0.295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| ||
|short_description=p@chr10:135075417..135075435,- | |||
}} | }} |
Latest revision as of 11:50, 23 July 2015
Short description: | p@chr10:135075417..135075435, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135075417..135075435, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.02e-26 | 72 |
classical monocyte | 2.26e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-19 | 42 |
myeloid lineage restricted progenitor cell | 5.91e-18 | 66 |
granulocyte monocyte progenitor cell | 1.29e-17 | 67 |
myeloid cell | 2.50e-17 | 108 |
common myeloid progenitor | 2.50e-17 | 108 |
defensive cell | 1.81e-16 | 48 |
phagocyte | 1.81e-16 | 48 |
intermediate monocyte | 7.08e-15 | 9 |
CD14-positive, CD16-positive monocyte | 7.08e-15 | 9 |
monopoietic cell | 3.87e-14 | 59 |
monocyte | 3.87e-14 | 59 |
monoblast | 3.87e-14 | 59 |
promonocyte | 3.87e-14 | 59 |
leukocyte | 9.94e-14 | 136 |
macrophage dendritic cell progenitor | 1.49e-13 | 61 |
granulocyte | 4.43e-12 | 8 |
basophil | 5.95e-12 | 3 |
hematopoietic stem cell | 6.88e-11 | 168 |
hematopoietic cell | 5.23e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.29e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.29e-09 | 161 |
blood cell | 1.08e-08 | 11 |
mast cell | 4.46e-08 | 5 |
basophil mast progenitor cell | 4.46e-08 | 5 |
hematopoietic lineage restricted progenitor cell | 7.85e-08 | 120 |
endocrine cell | 2.64e-07 | 9 |
nongranular leukocyte | 3.20e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.31e-16 | 98 |
blood island | 4.31e-16 | 98 |
bone marrow | 5.55e-15 | 76 |
hemolymphoid system | 4.44e-14 | 108 |
bone element | 1.51e-13 | 82 |
lateral plate mesoderm | 2.36e-12 | 203 |
skeletal element | 6.20e-12 | 90 |
immune system | 2.11e-11 | 93 |
skeletal system | 2.76e-10 | 100 |
mesoderm | 7.97e-08 | 315 |
mesoderm-derived structure | 7.97e-08 | 315 |
presumptive mesoderm | 7.97e-08 | 315 |
musculoskeletal system | 2.93e-07 | 167 |