FFCP PHASE1:Mm9::chr8:114267768..114267787,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12927 | |EntrezGene=12927 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1355 | |||
|TSSclassifier=NA | |||
|UniProt=Q61140 | |UniProt=Q61140 | ||
|association_with_transcript=-19bp_to_NM_009954,uc009nmu.2_5end | |association_with_transcript=-19bp_to_NM_009954,uc009nmu.2_5end | ||
|cluster_id=chr8:114267768..114267787,- | |||
|description=CAGE_peak_3_at_Bcar1_5end | |description=CAGE_peak_3_at_Bcar1_5end | ||
|id=chr8:114267768..114267787,- | |id=chr8:114267768..114267787,- | ||
|ontology_enrichment_celltype=CL:0002319!1.43e-15!43;CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0000055!8.10e-15!50;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!1.71e-12!23;CL:0000337!1.71e-12!23;CL:0000393!1.02e-11!39;CL:0000211!1.02e-11!39;CL:0002321!1.50e-09!70;CL:0000220!1.50e-09!70 | |ontology_enrichment_celltype=CL:0002319!1.43e-15!43;CL:0000221!2.02e-15!44;CL:0000133!2.02e-15!44;CL:0000055!8.10e-15!50;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000117!1.71e-12!23;CL:0000337!1.71e-12!23;CL:0000393!1.02e-11!39;CL:0000211!1.02e-11!39;CL:0002321!1.50e-09!70;CL:0000220!1.50e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.33e-17,43;CL:0000117,2.15e-16,23;CL:0000337,2.15e-16,23;CL:0000221,3.42e-16,44;CL:0000133,3.42e-16,44;CL:0000540,4.39e-13,33;CL:0000047,4.39e-13,33;CL:0000031,4.39e-13,33;CL:0000404,4.39e-13,33;CL:0000393,1.82e-12,39;CL:0000211,1.82e-12,39;CL:0002321,5.91e-11,70;CL:0002609,2.56e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-24!75;UBERON:0001016!1.33e-24!75;UBERON:0001017!2.69e-24!73;UBERON:0005743!2.69e-24!73;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.10e-16!71;UBERON:0003075!1.10e-16!71;UBERON:0007284!1.10e-16!71;UBERON:0000955!1.02e-15!50;UBERON:0006238!1.02e-15!50;UBERON:0002616!2.07e-15!49;UBERON:0000033!1.36e-14!63;UBERON:0002020!7.52e-14!34;UBERON:0003080!3.45e-12!40;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003056!1.02e-11!49;UBERON:0002791!6.98e-11!29;UBERON:0003528!6.98e-11!29;UBERON:0001893!6.98e-11!29;UBERON:0000025!2.16e-10!114;UBERON:0004111!2.22e-09!122;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0000153!1.53e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!1.33e-24!75;UBERON:0001016!1.33e-24!75;UBERON:0001017!2.69e-24!73;UBERON:0005743!2.69e-24!73;UBERON:0004121!2.14e-20!102;UBERON:0000924!2.14e-20!102;UBERON:0006601!2.14e-20!102;UBERON:0001049!7.47e-18!52;UBERON:0005068!7.47e-18!52;UBERON:0006241!7.47e-18!52;UBERON:0007135!7.47e-18!52;UBERON:0002346!1.10e-16!71;UBERON:0003075!1.10e-16!71;UBERON:0007284!1.10e-16!71;UBERON:0000955!1.02e-15!50;UBERON:0006238!1.02e-15!50;UBERON:0002616!2.07e-15!49;UBERON:0000033!1.36e-14!63;UBERON:0002020!7.52e-14!34;UBERON:0003080!3.45e-12!40;UBERON:0002780!9.02e-12!39;UBERON:0001890!9.02e-12!39;UBERON:0006240!9.02e-12!39;UBERON:0003056!1.02e-11!49;UBERON:0002791!6.98e-11!29;UBERON:0003528!6.98e-11!29;UBERON:0001893!6.98e-11!29;UBERON:0000025!2.16e-10!114;UBERON:0004111!2.22e-09!122;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0000153!1.53e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.53e-25,73;UBERON:0001016,1.10e-24,75;UBERON:0000073,5.73e-20,54;UBERON:0001049,4.52e-19,52;UBERON:0005068,4.52e-19,52;UBERON:0006241,4.52e-19,52;UBERON:0007135,4.52e-19,52;UBERON:0004121,1.18e-18,95;UBERON:0000924,1.18e-18,95;UBERON:0006601,1.18e-18,95;UBERON:0002346,2.30e-17,64;UBERON:0003075,2.30e-17,64;UBERON:0007284,2.30e-17,64;UBERON:0002020,9.69e-17,34;UBERON:0000955,7.80e-15,47;UBERON:0006238,7.80e-15,47;UBERON:0002616,2.07e-14,46;UBERON:0010371,2.61e-13,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0010314,2.36e-12,92;UBERON:0003080,1.82e-11,40;UBERON:0000956,4.34e-11,21;UBERON:0001869,4.34e-11,21;UBERON:0000203,4.34e-11,21;UBERON:0002780,6.44e-11,39;UBERON:0001890,6.44e-11,39;UBERON:0006240,6.44e-11,39;UBERON:0003056,1.14e-10,49;UBERON:0000025,2.84e-09,114;UBERON:0003076,3.64e-09,12;UBERON:0003057,3.64e-09,12;UBERON:0002619,8.17e-08,17;UBERON:0004111,1.29e-07,122 | |||
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| ||
|short_description=p3@Bcar1 | |short_description=p3@Bcar1 | ||
}} | }} |
Latest revision as of 13:09, 1 October 2015
Short description: | p3@Bcar1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bcar1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1355 |
Association with transcript: | -19bp_to_NM_009954, uc009nmu.2_5end |
EntrezGene: | Bcar1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.33e-17 | 43 |
CNS neuron (sensu Vertebrata) | 2.15e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-16 | 23 |
ectodermal cell | 3.42e-16 | 44 |
neurectodermal cell | 3.42e-16 | 44 |
neuron | 4.39e-13 | 33 |
neuronal stem cell | 4.39e-13 | 33 |
neuroblast | 4.39e-13 | 33 |
electrically signaling cell | 4.39e-13 | 33 |
electrically responsive cell | 1.82e-12 | 39 |
electrically active cell | 1.82e-12 | 39 |
embryonic cell | 5.91e-11 | 70 |
neuron of cerebral cortex | 2.56e-07 | 6 |