Personal tools

FFCP PHASE1:Mm9::chr8:26707472..26707510,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=270035
|EntrezGene=270035
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=457bp_to_uc009lgi.1_5end
|association_with_transcript=457bp_to_uc009lgi.1_5end
|cluster_id=chr8:26707472..26707510,-
|description=CAGE_peak_3_at_Letm2_5end
|description=CAGE_peak_3_at_Letm2_5end
|id=chr8:26707472..26707510,-
|id=chr8:26707472..26707510,-
|ontology_enrichment_celltype=CL:0002031!5.76e-07!25
|ontology_enrichment_celltype=CL:0002031!5.76e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002031,1.38e-15,25;CL:0000988,1.92e-11,32;CL:0002032,1.92e-11,32;CL:0000037,1.92e-11,32;CL:0000837,1.92e-11,32;CL:0000050,4.08e-11,9;CL:0000839,7.71e-10,13;CL:0000553,2.57e-09,6;CL:0000556,2.57e-09,6;CL:0000763,9.75e-08,16;CL:0002027,3.24e-07,3;CL:0002006,3.24e-07,3;CL:0002024,3.24e-07,3;CL:0000838,4.21e-07,12;CL:0000791,5.24e-07,9;CL:0000789,5.24e-07,9;CL:0002420,5.24e-07,9;CL:0002419,5.24e-07,9;CL:0000790,5.24e-07,9;CL:0002320,5.51e-07,46;CL:0000134,5.51e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0050686,2.18e-09,6;DOID:0060100,4.80e-08,3;DOID:4045,4.80e-08,3
|ontology_enrichment_uberon=UBERON:0002390!6.35e-09!45;UBERON:0003061!6.35e-09!45;UBERON:0004177!7.11e-09!29;UBERON:0002193!1.73e-08!48;UBERON:0002405!1.12e-07!70;UBERON:0005057!4.06e-07!51
|ontology_enrichment_uberon=UBERON:0002390!6.35e-09!45;UBERON:0003061!6.35e-09!45;UBERON:0004177!7.11e-09!29;UBERON:0002193!1.73e-08!48;UBERON:0002405!1.12e-07!70;UBERON:0005057!4.06e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.52e-19,48;UBERON:0002405,5.52e-19,48;UBERON:0002390,1.81e-18,45;UBERON:0003061,1.81e-18,45;UBERON:0004177,2.62e-15,29;UBERON:0005057,2.62e-15,29;UBERON:0000077,4.69e-12,35;UBERON:0002370,4.97e-11,23;UBERON:0000974,4.97e-11,23;UBERON:0004807,4.97e-11,23;UBERON:0005058,4.97e-11,23;UBERON:0003351,4.97e-11,23;UBERON:0009113,4.97e-11,23;UBERON:0003295,4.97e-11,23;UBERON:0009722,4.97e-11,23;UBERON:0005562,4.97e-11,23;UBERON:0007690,4.97e-11,23;UBERON:0006562,1.83e-10,24;UBERON:0003408,1.83e-10,24;UBERON:0001557,1.83e-10,24;UBERON:0001042,1.83e-10,24;UBERON:0008814,1.83e-10,24;UBERON:0009145,1.83e-10,24;UBERON:0000072,5.04e-09,27;UBERON:0003081,5.64e-08,87;UBERON:0000926,2.33e-07,120;UBERON:0004120,2.33e-07,120;UBERON:0006603,2.33e-07,120;UBERON:0002384,5.51e-07,46
|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.84353614240354,0.703943610758334,0.936258105287974,0,0.159544317990673,12.1552518251156,7.69299541287177,1.99865857089398,1.82227740650843,1.39912375625629,2.83915948822414,1.91960207048034,0.42438965179803,0.255129870453209,0.893618560807968,0,0,0,0,0,0.215471232685889,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,5.85944283031671,2.3440060335714,4.18818995179039,9.99993529652724,4.78131839470912,3.88408282424923,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,2.34895648480831,4.35217285206807,5.71359458542189,0.514518872071894,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,4.66088190564909,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0.494389935468748,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0.628340120440365,0,0.718890747035522,0,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0.540186184383045,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0.439100230582101,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0.786235980452812,0.674586337154561,0.811440485554012,2.17059443777175,0.763877555344259,0.863088412352432,0.648540907100142,0.549122826376163,1.43768206527355,0,0,0,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.952174563544055,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,6.03165135757089,0,0.491764273019036,0,0.160550589987792,0,0,0,0.94652465824877,0,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0,0,0.425820255624806,0,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0,0.177340233642274,0,0,0,0,0.63549621259146,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0.854354403989263,0.206386867963223,1.11116716421827,1.31857919903284,1.91371918809435,1.60144721244566,0.509935289981566,0.839708713941948,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,2.81846469342095,0.149516546043979,0.330916980914195,0.194451188344048,0,0.675824501963113,0.469428954583016,0.39061315453185,0.104859344425711,0.483168241652012,0,1.26404448251271,0,0.102710957164827,0.129920822977795,0.716106782669926,1.58945083825012,1.08175904567972,1.62458479892035,1.00966449948148,1.143102099825,1.20991422164209,0.877120926657772,2.30908419936791,1.75315353272353,0.226730383615211,0.443971906748129,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.384150914429216,0.34461281373368,0.952587382566147,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0.872078499793971,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0.382576664137687,0,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.84353614240354,0.703943610758334,0.936258105287974,0,0.159544317990673,12.1552518251156,7.69299541287177,1.99865857089398,1.82227740650843,1.39912375625629,2.83915948822414,1.91960207048034,0.42438965179803,0.255129870453209,0.893618560807968,0,0,0,0,0,0.215471232685889,0,0,0,1.27006134691926,1.23012957516914,0,0,0.166234645358492,0,5.85944283031671,2.3440060335714,4.18818995179039,9.99993529652724,4.78131839470912,3.88408282424923,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,2.34895648480831,4.35217285206807,5.71359458542189,0.514518872071894,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,4.66088190564909,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0.494389935468748,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0.628340120440365,0,0.718890747035522,0,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0,0,1.49288364732112,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0.540186184383045,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0.439100230582101,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0.786235980452812,0.674586337154561,0.811440485554012,2.17059443777175,0.763877555344259,0.863088412352432,0.648540907100142,0.549122826376163,1.43768206527355,0,0,0,0,0,1.10851914099963,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.952174563544055,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0.144649058581512,6.03165135757089,0,0.491764273019036,0,0.160550589987792,0,0,0,0.94652465824877,0,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0,0,0.425820255624806,0,0,0.164970122972535,0,0.485561272309963,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.258717367565509,0,0.177340233642274,0,0,0,0,0.63549621259146,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0.854354403989263,0.206386867963223,1.11116716421827,1.31857919903284,1.91371918809435,1.60144721244566,0.509935289981566,0.839708713941948,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0,0,2.81846469342095,0.149516546043979,0.330916980914195,0.194451188344048,0,0.675824501963113,0.469428954583016,0.39061315453185,0.104859344425711,0.483168241652012,0,1.26404448251271,0,0.102710957164827,0.129920822977795,0.716106782669926,1.58945083825012,1.08175904567972,1.62458479892035,1.00966449948148,1.143102099825,1.20991422164209,0.877120926657772,2.30908419936791,1.75315353272353,0.226730383615211,0.443971906748129,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,1.19707462020309,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.384150914429216,0.34461281373368,0.952587382566147,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0.872078499793971,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0,0.467863216890817,0,0.382576664137687,0,0.463735671240843
|short_description=p3@Letm2
|short_description=p3@Letm2
}}
}}

Latest revision as of 21:04, 1 October 2015

Short description:p3@Letm2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Letm2_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 457bp_to_uc009lgi.1_5end
EntrezGene:Letm2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Letm2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.69
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell1.38e-1525
hematopoietic cell1.92e-1132
hematopoietic oligopotent progenitor cell1.92e-1132
hematopoietic stem cell1.92e-1132
hematopoietic multipotent progenitor cell1.92e-1132
megakaryocyte-erythroid progenitor cell4.08e-119
myeloid lineage restricted progenitor cell7.71e-1013
megakaryocyte progenitor cell2.57e-096
megakaryocyte2.57e-096
myeloid cell9.75e-0816
CD9-positive, CD41-positive megakaryocyte cell3.24e-073
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell3.24e-073
Kit-positive megakaryocyte progenitor cell3.24e-073
lymphoid lineage restricted progenitor cell4.21e-0712
mature alpha-beta T cell5.24e-079
alpha-beta T cell5.24e-079
immature T cell5.24e-079
mature T cell5.24e-079
immature alpha-beta T cell5.24e-079
connective tissue cell5.51e-0746
mesenchymal cell5.51e-0746

Uber anatomy
Ontology termp-valuen
hemolymphoid system5.52e-1948
immune system5.52e-1948
hematopoietic system1.81e-1845
blood island1.81e-1845
hemopoietic organ2.62e-1529
immune organ2.62e-1529
mixed endoderm/mesoderm-derived structure4.69e-1235
thymus4.97e-1123
neck4.97e-1123
respiratory system epithelium4.97e-1123
hemolymphoid system gland4.97e-1123
pharyngeal epithelium4.97e-1123
thymic region4.97e-1123
pharyngeal gland4.97e-1123
entire pharyngeal arch endoderm4.97e-1123
thymus primordium4.97e-1123
early pharyngeal endoderm4.97e-1123
pharynx1.83e-1024
gland of gut1.83e-1024
upper respiratory tract1.83e-1024
chordate pharynx1.83e-1024
pharyngeal arch system1.83e-1024
pharyngeal region of foregut1.83e-1024
segment of respiratory tract5.04e-0927
lateral plate mesoderm5.64e-0887
mesoderm2.33e-07120
mesoderm-derived structure2.33e-07120
presumptive mesoderm2.33e-07120
connective tissue5.51e-0746

Disease
Ontology termp-valuen
organ system cancer2.18e-096
musculoskeletal system cancer4.80e-083
muscle cancer4.80e-083
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:26707472..26707510,-&oldid=4322200"