FFCP PHASE1:Hg19::chr16:420502..420513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10573 | |EntrezGene=10573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14484 | |HGNC=14484 | ||
|TSSclassifier=strong | |||
|UniProt=Q13084,Q4TT37 | |UniProt=Q13084,Q4TT37 | ||
|association_with_transcript=0bp_to_ENST00000389675,ENST00000447696,ENST00000483764_5end | |association_with_transcript=0bp_to_ENST00000389675,ENST00000447696,ENST00000483764_5end | ||
|cluster_id=chr16:420502..420513,- | |||
|description=CAGE_peak_3_at_MRPL28_5end | |description=CAGE_peak_3_at_MRPL28_5end | ||
|id=chr16:420502..420513,- | |id=chr16:420502..420513,- | ||
|ontology_enrichment_celltype=CL:0002321!3.84e-14!248;CL:0000220!5.25e-14!246;CL:0000222!8.24e-12!119;CL:0000055!2.85e-10!180;CL:0000183!4.46e-09!59;CL:0000680!1.15e-07!57;CL:0000056!1.15e-07!57;CL:0000355!1.15e-07!57;CL:0000187!5.82e-07!54 | |ontology_enrichment_celltype=CL:0002321!3.84e-14!248;CL:0000220!5.25e-14!246;CL:0000222!8.24e-12!119;CL:0000055!2.85e-10!180;CL:0000183!4.46e-09!59;CL:0000680!1.15e-07!57;CL:0000056!1.15e-07!57;CL:0000355!1.15e-07!57;CL:0000187!5.82e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002494;8.81e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.75e-13,121;CL:0002321,5.22e-11,250;CL:0000680,1.96e-08,58;CL:0000056,1.96e-08,58;CL:0000355,1.96e-08,58;CL:0002494,9.81e-08,16;CL:0000187,1.54e-07,55;CL:0000359,1.66e-07,32;CL:0000115,6.96e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.48e-18!312;UBERON:0000483!4.63e-18!309;UBERON:0000025!3.45e-16!194;UBERON:0000477!4.74e-15!286;UBERON:0000481!6.76e-15!347;UBERON:0004111!1.43e-13!241;UBERON:0003914!2.36e-13!118;UBERON:0004872!3.01e-11!84;UBERON:0000475!7.70e-11!365;UBERON:0004535!1.94e-10!110;UBERON:0002049!6.46e-10!79;UBERON:0007798!6.46e-10!79;UBERON:0001009!1.27e-09!113;UBERON:0005256!1.09e-08!143;UBERON:0000914!1.47e-08!83;UBERON:0002329!1.47e-08!83;UBERON:0003077!1.47e-08!83;UBERON:0003059!1.47e-08!83;UBERON:0007282!1.47e-08!83;UBERON:0009618!1.47e-08!83;UBERON:0007285!1.47e-08!83;UBERON:0001981!4.51e-08!60;UBERON:0007500!4.51e-08!60;UBERON:0004537!4.51e-08!60;UBERON:0006965!4.51e-08!60;UBERON:0004290!6.52e-08!70;UBERON:0000486!2.22e-07!82;UBERON:0000055!2.52e-07!69;UBERON:0001637!4.21e-07!42;UBERON:0003509!4.21e-07!42;UBERON:0004572!4.21e-07!42;UBERON:0001134!5.27e-07!61;UBERON:0002036!5.27e-07!61;UBERON:0003082!5.27e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,5.10e-17,309;UBERON:0000483,1.45e-16,306;UBERON:0000025,6.33e-16,192;UBERON:0003914,4.50e-15,117;UBERON:0004872,6.01e-14,83;UBERON:0007503,1.84e-12,78;UBERON:0004535,5.47e-12,109;UBERON:0004111,1.07e-11,240;UBERON:0002049,1.43e-11,78;UBERON:0007798,1.43e-11,78;UBERON:0001009,4.10e-11,112;UBERON:0007500,6.26e-10,59;UBERON:0001981,6.26e-10,59;UBERON:0004537,6.26e-10,59;UBERON:0006965,6.26e-10,59;UBERON:0010314,1.02e-09,132;UBERON:0007524,1.20e-09,73;UBERON:0003104,2.53e-09,160;UBERON:0009142,2.53e-09,160;UBERON:0001637,3.28e-09,42;UBERON:0003509,3.28e-09,42;UBERON:0004572,3.28e-09,42;UBERON:0003077,3.58e-09,72;UBERON:0007285,3.58e-09,72;UBERON:0002329,5.88e-09,71;UBERON:0003059,5.88e-09,71;UBERON:0007282,5.88e-09,71;UBERON:0004290,5.88e-09,71;UBERON:0009618,5.88e-09,71;UBERON:0000055,8.17e-09,68;UBERON:0000486,4.85e-08,83;UBERON:0001134,7.15e-08,62;UBERON:0002036,7.15e-08,62;UBERON:0003082,7.15e-08,62;UBERON:0000490,8.78e-08,148;UBERON:0000948,9.51e-08,24;UBERON:0005498,9.51e-08,24;UBERON:0004140,9.51e-08,24;UBERON:0009881,9.51e-08,24;UBERON:0004141,9.51e-08,24;UBERON:0003084,9.51e-08,24;UBERON:0007005,9.51e-08,24;UBERON:0004139,9.51e-08,24;UBERON:0004291,9.51e-08,24;UBERON:0005256,1.16e-07,122;UBERON:0002385,2.90e-07,64;UBERON:0001015,2.90e-07,64;UBERON:0000383,2.90e-07,64;UBERON:0003103,7.41e-07,68 | |||
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| ||
|short_description=p3@MRPL28 | |short_description=p3@MRPL28 | ||
}} | }} |
Latest revision as of 15:46, 16 September 2015
Short description: | p3@MRPL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPL28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389675, ENST00000447696, ENST00000483764_5end |
EntrezGene: | MRPL28 |
HGNC: | 14484 |
UniProt: | Q13084Q4TT37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.75e-13 | 121 |
embryonic cell | 5.22e-11 | 250 |
muscle precursor cell | 1.96e-08 | 58 |
myoblast | 1.96e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-08 | 58 |
cardiocyte | 9.81e-08 | 16 |
muscle cell | 1.54e-07 | 55 |
vascular associated smooth muscle cell | 1.66e-07 | 32 |
endothelial cell | 6.96e-07 | 36 |