FFCP PHASE1:Mm9::chr9:58047540..58047563,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2394 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:58047540..58047563,- | |||
|description=CAGE_peak_at_chr9:58047540..58047563,- | |description=CAGE_peak_at_chr9:58047540..58047563,- | ||
|id=chr9:58047540..58047563,- | |id=chr9:58047540..58047563,- | ||
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000540!5.37e-09!33;CL:0000047!5.37e-09!33;CL:0000031!5.37e-09!33;CL:0000404!5.37e-09!33;CL:0002609!8.21e-07!6 | |ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000540!5.37e-09!33;CL:0000047!5.37e-09!33;CL:0000031!5.37e-09!33;CL:0000404!5.37e-09!33;CL:0002609!8.21e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-17,23;CL:0000337,3.43e-17,23;CL:0002609,7.36e-15,6;CL:0000540,4.34e-11,33;CL:0000047,4.34e-11,33;CL:0000031,4.34e-11,33;CL:0000404,4.34e-11,33;CL:0000120,1.70e-09,3;CL:0002613,3.56e-09,3;CL:0000393,6.11e-09,39;CL:0000211,6.11e-09,39;CL:0002608,1.11e-08,3;CL:0002319,7.58e-08,43;CL:0000221,1.32e-07,44;CL:0000133,1.32e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.41e-20!49;UBERON:0002346!2.85e-19!71;UBERON:0003075!2.85e-19!71;UBERON:0007284!2.85e-19!71;UBERON:0000033!9.15e-17!63;UBERON:0004121!4.60e-15!102;UBERON:0000924!4.60e-15!102;UBERON:0006601!4.60e-15!102;UBERON:0003080!4.86e-15!40;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0001017!1.95e-14!73;UBERON:0005743!1.95e-14!73;UBERON:0002616!2.26e-14!49;UBERON:0001049!2.35e-14!52;UBERON:0005068!2.35e-14!52;UBERON:0006241!2.35e-14!52;UBERON:0007135!2.35e-14!52;UBERON:0000955!7.66e-14!50;UBERON:0006238!7.66e-14!50;UBERON:0000073!1.21e-13!75;UBERON:0001016!1.21e-13!75;UBERON:0002020!2.38e-12!34;UBERON:0002791!3.69e-10!29;UBERON:0003528!3.69e-10!29;UBERON:0001893!3.69e-10!29;UBERON:0007811!1.63e-08!86;UBERON:0000956!4.05e-08!21;UBERON:0001869!4.05e-08!21;UBERON:0000203!4.05e-08!21;UBERON:0000153!3.64e-07!94 | |ontology_enrichment_uberon=UBERON:0003056!2.41e-20!49;UBERON:0002346!2.85e-19!71;UBERON:0003075!2.85e-19!71;UBERON:0007284!2.85e-19!71;UBERON:0000033!9.15e-17!63;UBERON:0004121!4.60e-15!102;UBERON:0000924!4.60e-15!102;UBERON:0006601!4.60e-15!102;UBERON:0003080!4.86e-15!40;UBERON:0002780!1.67e-14!39;UBERON:0001890!1.67e-14!39;UBERON:0006240!1.67e-14!39;UBERON:0001017!1.95e-14!73;UBERON:0005743!1.95e-14!73;UBERON:0002616!2.26e-14!49;UBERON:0001049!2.35e-14!52;UBERON:0005068!2.35e-14!52;UBERON:0006241!2.35e-14!52;UBERON:0007135!2.35e-14!52;UBERON:0000955!7.66e-14!50;UBERON:0006238!7.66e-14!50;UBERON:0000073!1.21e-13!75;UBERON:0001016!1.21e-13!75;UBERON:0002020!2.38e-12!34;UBERON:0002791!3.69e-10!29;UBERON:0003528!3.69e-10!29;UBERON:0001893!3.69e-10!29;UBERON:0007811!1.63e-08!86;UBERON:0000956!4.05e-08!21;UBERON:0001869!4.05e-08!21;UBERON:0000203!4.05e-08!21;UBERON:0000153!3.64e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.71e-25,49;UBERON:0002346,4.45e-18,64;UBERON:0003075,4.45e-18,64;UBERON:0007284,4.45e-18,64;UBERON:0002780,3.82e-17,39;UBERON:0001890,3.82e-17,39;UBERON:0006240,3.82e-17,39;UBERON:0003528,7.14e-17,29;UBERON:0002791,7.14e-17,29;UBERON:0001893,7.14e-17,29;UBERON:0003080,1.30e-16,40;UBERON:0004121,7.92e-16,95;UBERON:0000924,7.92e-16,95;UBERON:0006601,7.92e-16,95;UBERON:0010371,3.56e-15,73;UBERON:0002616,6.60e-14,46;UBERON:0002020,6.89e-14,34;UBERON:0000955,1.59e-13,47;UBERON:0006238,1.59e-13,47;UBERON:0000073,9.13e-13,54;UBERON:0000956,1.75e-12,21;UBERON:0001869,1.75e-12,21;UBERON:0000203,1.75e-12,21;UBERON:0001017,2.52e-12,73;UBERON:0001016,7.31e-12,75;UBERON:0001049,7.86e-12,52;UBERON:0005068,7.86e-12,52;UBERON:0006241,7.86e-12,52;UBERON:0007135,7.86e-12,52;UBERON:0010314,6.44e-11,92;UBERON:0000970,2.22e-10,9;UBERON:0000019,2.22e-10,9;UBERON:0000047,2.22e-10,9;UBERON:0010312,2.22e-10,9;UBERON:0004088,2.22e-10,9;UBERON:0002104,2.22e-10,9;UBERON:0001456,2.22e-10,9;UBERON:0003072,2.22e-10,9;UBERON:0004128,2.22e-10,9;UBERON:0003071,2.22e-10,9;UBERON:0000369,4.81e-09,5;UBERON:0002435,4.81e-09,5;UBERON:0000204,4.81e-09,5;UBERON:0010082,4.81e-09,5;UBERON:0002619,1.64e-08,17;UBERON:0001444,2.35e-08,11;UBERON:0000020,1.35e-07,12;UBERON:0001032,1.35e-07,12;UBERON:0004456,1.35e-07,12;UBERON:0000033,5.92e-07,13;UBERON:0005085,5.92e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,7.48570905180512,8.99284664762456,7.60597684207415,0,0,0,0,0,0,0.384218305321555,1.34796496001021,2.43010688997043,1.26194976810829,0.571301968807607,0.441737081903227,3.30725157880376,2.58782771749238,4.5960939330501,2.20231761998777,0.383062014255563,0.46081959976873,6.85808696197008,5.39777097254217,6.77187381723788,0,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,1.88481528169297,0.869121600961382,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,3.44853156650209,6.84236093260327,3.46621081022145,4.76255494059295,3.84341160854549,2.06143794031403,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,8.23236899034275,0,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,1.50035924522115,1.59606210278046,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0.299033092087958,0.827292452285488,1.94451188344048,1.80823752868824,1.01373675294467,1.64300134104056,1.3020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0,0.572895513439397,1.20297227640581,0,1.5107877947794,0,0.900642406448441,1.81256963593682,0,0.726511433089237,1.19707462020309,1.19513524027894,0.243106717068294,1.25767897576789,0.735374033800057,0,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,0,0.679020569229309,0.561142271657738,0,0.591026894253381,0,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,7.48570905180512,8.99284664762456,7.60597684207415,0,0,0,0,0,0,0.384218305321555,1.34796496001021,2.43010688997043,1.26194976810829,0.571301968807607,0.441737081903227,3.30725157880376,2.58782771749238,4.5960939330501,2.20231761998777,0.383062014255563,0.46081959976873,6.85808696197008,5.39777097254217,6.77187381723788,0,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,1.88481528169297,0.869121600961382,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0,0.210441855886474,0.260240885925407,3.44853156650209,6.84236093260327,3.46621081022145,4.76255494059295,3.84341160854549,2.06143794031403,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,8.23236899034275,0,0.264450566663544,0.426576501070468,0.464473343720877,0.38660238396628,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,1.50035924522115,1.59606210278046,0.891844088010353,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,0,0.299033092087958,0.827292452285488,1.94451188344048,1.80823752868824,1.01373675294467,1.64300134104056,1.3020438484395,0.524296722128554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0,0.572895513439397,1.20297227640581,0,1.5107877947794,0,0.900642406448441,1.81256963593682,0,0.726511433089237,1.19707462020309,1.19513524027894,0.243106717068294,1.25767897576789,0.735374033800057,0,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.169229215783353,0.365855945745545,0,0.679020569229309,0.561142271657738,0,0.591026894253381,0,0.309873682371932,0.192906610981141,0.749431733813838,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr9:58047540..58047563,- | |short_description=p@chr9:58047540..58047563,- | ||
}} | }} |
Latest revision as of 09:33, 5 August 2015
Short description: | p@chr9:58047540..58047563, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:58047540..58047563, - |
Coexpression cluster: | MCL_coexpression_mm9:2394 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.43e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.43e-17 | 23 |
neuron of cerebral cortex | 7.36e-15 | 6 |
neuron | 4.34e-11 | 33 |
neuronal stem cell | 4.34e-11 | 33 |
neuroblast | 4.34e-11 | 33 |
electrically signaling cell | 4.34e-11 | 33 |
granule cell | 1.70e-09 | 3 |
striatum neuron | 3.56e-09 | 3 |
electrically responsive cell | 6.11e-09 | 39 |
electrically active cell | 6.11e-09 | 39 |
hippocampal neuron | 1.11e-08 | 3 |
neural cell | 7.58e-08 | 43 |
ectodermal cell | 1.32e-07 | 44 |
neurectodermal cell | 1.32e-07 | 44 |