FFCP PHASE1:Mm9::chrX:98463557..98463568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16186 | |EntrezGene=16186 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1285 | |||
|TSSclassifier=NA | |||
|UniProt=P34902,Q3UPA9 | |UniProt=P34902,Q3UPA9 | ||
|association_with_transcript=-12bp_to_NM_013563,uc009txc.1,uc009txd.1_5end | |association_with_transcript=-12bp_to_NM_013563,uc009txc.1,uc009txd.1_5end | ||
|cluster_id=chrX:98463557..98463568,- | |||
|description=CAGE_peak_2_at_Il2rg_5end | |description=CAGE_peak_2_at_Il2rg_5end | ||
|id=chrX:98463557..98463568,- | |id=chrX:98463557..98463568,- | ||
|ontology_enrichment_celltype=CL:0000988!7.20e-11!32;CL:0002032!7.20e-11!32;CL:0000037!7.20e-11!32;CL:0000566!7.20e-11!32;CL:0000837!7.20e-11!32;CL:0000738!3.55e-09!17;CL:0002087!3.55e-09!17;CL:0002031!4.61e-09!25;CL:0000838!1.07e-08!12;CL:0000542!1.18e-08!13;CL:0000051!1.18e-08!13;CL:0000084!4.80e-08!11;CL:0000827!4.80e-08!11;CL:0000791!5.05e-07!9;CL:0000789!5.05e-07!9;CL:0002420!5.05e-07!9;CL:0002419!5.05e-07!9;CL:0000790!5.05e-07!9 | |ontology_enrichment_celltype=CL:0000988!7.20e-11!32;CL:0002032!7.20e-11!32;CL:0000037!7.20e-11!32;CL:0000566!7.20e-11!32;CL:0000837!7.20e-11!32;CL:0000738!3.55e-09!17;CL:0002087!3.55e-09!17;CL:0002031!4.61e-09!25;CL:0000838!1.07e-08!12;CL:0000542!1.18e-08!13;CL:0000051!1.18e-08!13;CL:0000084!4.80e-08!11;CL:0000827!4.80e-08!11;CL:0000791!5.05e-07!9;CL:0000789!5.05e-07!9;CL:0002420!5.05e-07!9;CL:0002419!5.05e-07!9;CL:0000790!5.05e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.60e-11,32;CL:0002032,1.60e-11,32;CL:0000037,1.60e-11,32;CL:0000837,1.60e-11,32;CL:0000738,1.09e-09,17;CL:0002087,1.09e-09,17;CL:0002031,1.35e-09,25;CL:0000838,3.55e-09,12;CL:0000542,3.92e-09,13;CL:0000051,3.92e-09,13;CL:0000084,1.76e-08,11;CL:0000827,1.76e-08,11;CL:0002320,2.14e-07,46;CL:0000134,2.14e-07,46;CL:0000791,2.16e-07,9;CL:0000789,2.16e-07,9;CL:0002420,2.16e-07,9;CL:0002419,2.16e-07,9;CL:0000790,2.16e-07,9;CL:0000624,6.70e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.95e-19!48;UBERON:0003081!1.73e-18!88;UBERON:0002390!2.42e-17!45;UBERON:0003061!2.42e-17!45;UBERON:0000926!5.49e-15!193;UBERON:0004120!5.49e-15!193;UBERON:0006603!5.49e-15!193;UBERON:0002405!1.70e-14!70;UBERON:0004177!2.15e-11!29;UBERON:0001004!6.56e-10!42;UBERON:0000065!8.86e-10!41;UBERON:0003104!3.22e-09!131;UBERON:0009142!3.22e-09!131;UBERON:0003408!4.73e-09!24;UBERON:0002370!5.71e-09!23;UBERON:0000974!5.71e-09!23;UBERON:0004807!5.71e-09!23;UBERON:0005058!5.71e-09!23;UBERON:0003351!5.71e-09!23;UBERON:0009113!5.71e-09!23;UBERON:0003295!5.71e-09!23;UBERON:0009722!5.71e-09!23;UBERON:0005562!5.71e-09!23;UBERON:0007690!5.71e-09!23;UBERON:0000077!5.74e-09!97;UBERON:0001041!1.02e-08!92;UBERON:0006562!1.78e-08!24;UBERON:0001557!1.78e-08!24;UBERON:0001042!1.78e-08!24;UBERON:0008814!1.78e-08!24;UBERON:0009145!1.78e-08!24;UBERON:0005057!9.17e-08!51;UBERON:0002371!8.28e-07!16 | |ontology_enrichment_uberon=UBERON:0002193!8.95e-19!48;UBERON:0003081!1.73e-18!88;UBERON:0002390!2.42e-17!45;UBERON:0003061!2.42e-17!45;UBERON:0000926!5.49e-15!193;UBERON:0004120!5.49e-15!193;UBERON:0006603!5.49e-15!193;UBERON:0002405!1.70e-14!70;UBERON:0004177!2.15e-11!29;UBERON:0001004!6.56e-10!42;UBERON:0000065!8.86e-10!41;UBERON:0003104!3.22e-09!131;UBERON:0009142!3.22e-09!131;UBERON:0003408!4.73e-09!24;UBERON:0002370!5.71e-09!23;UBERON:0000974!5.71e-09!23;UBERON:0004807!5.71e-09!23;UBERON:0005058!5.71e-09!23;UBERON:0003351!5.71e-09!23;UBERON:0009113!5.71e-09!23;UBERON:0003295!5.71e-09!23;UBERON:0009722!5.71e-09!23;UBERON:0005562!5.71e-09!23;UBERON:0007690!5.71e-09!23;UBERON:0000077!5.74e-09!97;UBERON:0001041!1.02e-08!92;UBERON:0006562!1.78e-08!24;UBERON:0001557!1.78e-08!24;UBERON:0001042!1.78e-08!24;UBERON:0008814!1.78e-08!24;UBERON:0009145!1.78e-08!24;UBERON:0005057!9.17e-08!51;UBERON:0002371!8.28e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.52e-21,48;UBERON:0002405,9.52e-21,48;UBERON:0002390,3.31e-19,45;UBERON:0003061,3.31e-19,45;UBERON:0003081,1.79e-18,87;UBERON:0004177,7.81e-13,29;UBERON:0005057,7.81e-13,29;UBERON:0000077,4.92e-12,35;UBERON:0000926,7.46e-11,120;UBERON:0004120,7.46e-11,120;UBERON:0006603,7.46e-11,120;UBERON:0001004,2.47e-10,42;UBERON:0003408,2.64e-10,24;UBERON:0002370,3.15e-10,23;UBERON:0000974,3.15e-10,23;UBERON:0004807,3.15e-10,23;UBERON:0005058,3.15e-10,23;UBERON:0003351,3.15e-10,23;UBERON:0009113,3.15e-10,23;UBERON:0003295,3.15e-10,23;UBERON:0009722,3.15e-10,23;UBERON:0005562,3.15e-10,23;UBERON:0007690,3.15e-10,23;UBERON:0000065,3.42e-10,41;UBERON:0006562,2.65e-09,24;UBERON:0001557,2.65e-09,24;UBERON:0001042,2.65e-09,24;UBERON:0008814,2.65e-09,24;UBERON:0009145,2.65e-09,24;UBERON:0001041,4.53e-09,80;UBERON:0002384,2.14e-07,46;UBERON:0002371,3.66e-07,16;UBERON:0000072,4.98e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,31.2478442728615,103.620499503627,97.3708429499493,38.5240428507386,34.3020283679947,26.7073138692681,28.1493695789172,6.99530499812892,7.49158489342356,1.39912375625629,33.123527362615,28.2455733227822,28.00971701867,2.72138528483423,18.3688259721638,17.7615856614476,4.7997726838022,5.27641346454491,0,0,0,0.190023419456374,0.756090389279792,0.443461021310609,1.27006134691926,0.61506478758457,0,0,0,0,7.53356935326434,7.0320181007142,15.1821885752402,8.2352408324342,7.5135003345429,13.1087795318411,1.38486499773135,2.73717714292689,11.9305388905093,0,0,0,0,0,0,31.207564726739,14.5072428402269,15.1242209614109,2.31533492432352,3.15186783932632,0,0.404632921719196,0.528990979272033,0,0,0,21.1476433561129,29.6659908770092,12.0781619540837,2.09720077362883,1.15265491596466,0.207379224616955,0.135005938331691,0.630974884054146,0.571301968807607,0.441737081903227,0.734944795289724,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.659431438650969,0.0914876436024097,0,0.279182999001381,0.56276261003168,0,0.294628585473668,0.569486723196412,0.559198337475902,2.42323818666189,0.906858721281426,2.89864488701678,1.72084775396277,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0.432982082022428,0.760079596425296,0,1.82694207550496,78.458178745093,1.92974780784272,2.60227990149204,0.608930956624282,1.61430848079241,1.65794904607885,2.23418543557839,1.38233250462643,4.20231445148436,4.19338135067744,0.884610551949874,3.72063754879041,4.19598885074748,5.81850303762267,3.72783522436244,0.292780797011547,0,3.0654846625031,4.79260498023681,2.39961092397363,6.4805815807263,0.748953197024114,0.457500602818626,0.628271760564322,0.173824320192276,0,0.20778804455956,0.162241263067758,1.42575109390443,4.35424397135326,1.0108910337347,1.26265113531884,0.390361328888111,0.229902104433473,0.180062129805349,0.60281927134286,0.408218994907967,0.2562274405697,0.937017245597288,0.517406741478031,0.862271971731369,0.756424320671277,1.05570674498369,0.876782929710299,0.556094498451196,4.52727816478817,2.26360350048738,0.995171334092466,4.21327912387941,6.69104558498259,4.54661599032948,1.65700618028402,1.40715635988658,1.80062061461015,4.02466050494857,2.36117078096885,1.07986979021165,2.09280550275367,2.95100741539581,2.33530684734339,3.12663714835613,3.94001913789829,1.94565142910054,2.19299981137998,4.39100230582101,3.22095405024892,0.630869845692382,1.02904612379284,2.31293148088659,1.58670339998127,2.55945900642281,0.696710015581316,1.28867461322093,1.4117846723634,0.22237804384487,1.71203063501303,3.32170343081158,0.823494773620054,3.2673577144035,1.59165177632921,0.974820435595601,3.59527763461689,0.648414149624083,1.59313018603494,2.0863469104839,1.71372768914593,1.1270773567308,2.8511185898344,1.93952487167626,2.03393877681924,2.21327879934901,1.32849133181642,1.56998727841375,0.987177311374404,0.889357881261447,2.33583148002532,1.96558995113203,1.34917267430912,1.62288097110802,1.68824011826692,1.78238096246994,3.45235364940973,2.59416362840057,3.56929837144506,1.43768206527355,2.97712758134803,2.18426371180192,2.02063102357689,1.07638448113147,1.4473305640901,9.79191907883005,0.947457058852424,1.79261474086228,2.37643120085263,2.58159273117352,5.02518772325447,4.99891645860629,3.31727201358258,6.46304090835383,4.65075848262427,5.10255259703959,8.84861899464985,10.3610989119537,9.11289069063523,25.6345182696763,55.4783797495084,2.45882136509518,4.13905119457099,0.321101179975584,0.234423373184406,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.42452482933804,0.651547837414304,1.31976098378028,2.65490276679926,0.728341908464944,1.209294227859,0.943025398779491,4.13422650033082,2.15204603560749,1.03371317267288,1.45413491791002,1.78248689192361,1.58018378967908,3.16255825724996,2.06271086496374,0.340439605753788,0.18006109403131,0.517434735131018,0.643011105094777,0.177340233642274,0.713475270408282,0.493647061806363,1.522324745573,23.7018425144347,30.2919861335263,0.882113592219848,2.14352128823924,3.22928853391811,2.77439454669517,2.38744688006273,1.31312719796049,2.04036585640896,0,14.8657666294132,5.57244543500701,6.66700298530962,4.89757988212197,9.15851325730869,15.328137604837,20.2274331692688,17.6338829927809,17.9659965945751,2.86401185404534,0.474503990371703,1.62655573701479,0.972048067396211,1.67270636811575,1.09181281873089,1.21377911746339,1.40510874733071,1.04702376793612,1.16653475962614,2.4853572523477,0,0.897099276263873,0.496375471371293,0.388902376688095,0.258319646955462,0.675824501963113,0.938857909166032,0.39061315453185,0.419437377702843,0,0,24.9648785296261,9.32535990334755,11.6063381596255,18.4487568628469,17.0075360884107,15.0997829633761,19.7120537212749,22.3011186033612,23.6261492878665,17.756185950615,21.9801083598312,26.9958329649114,26.1696209261696,24.7779032624926,0.906921534460845,5.99362074109975,5.02397597013064,6.71538465456314,1.15913756419314,6.56888664079137,1.46521299413812,0.428736758158132,0,0,0,0.572895513439397,0.343706364687375,0.6850825197706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| 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| ||
|short_description=p2@Il2rg | |short_description=p2@Il2rg | ||
}} | }} |
Latest revision as of 00:58, 2 October 2015
Short description: | p2@Il2rg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Il2rg_5end |
Coexpression cluster: | MCL_coexpression_mm9:1285 |
Association with transcript: | -12bp_to_NM_013563, uc009txc.1, uc009txd.1_5end |
EntrezGene: | Il2rg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.60e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 32 |
hematopoietic stem cell | 1.60e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 32 |
leukocyte | 1.09e-09 | 17 |
nongranular leukocyte | 1.09e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 1.35e-09 | 25 |
lymphoid lineage restricted progenitor cell | 3.55e-09 | 12 |
lymphocyte | 3.92e-09 | 13 |
common lymphoid progenitor | 3.92e-09 | 13 |
T cell | 1.76e-08 | 11 |
pro-T cell | 1.76e-08 | 11 |
connective tissue cell | 2.14e-07 | 46 |
mesenchymal cell | 2.14e-07 | 46 |
mature alpha-beta T cell | 2.16e-07 | 9 |
alpha-beta T cell | 2.16e-07 | 9 |
immature T cell | 2.16e-07 | 9 |
mature T cell | 2.16e-07 | 9 |
immature alpha-beta T cell | 2.16e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.52e-21 | 48 |
immune system | 9.52e-21 | 48 |
hematopoietic system | 3.31e-19 | 45 |
blood island | 3.31e-19 | 45 |
lateral plate mesoderm | 1.79e-18 | 87 |
hemopoietic organ | 7.81e-13 | 29 |
immune organ | 7.81e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 4.92e-12 | 35 |
mesoderm | 7.46e-11 | 120 |
mesoderm-derived structure | 7.46e-11 | 120 |
presumptive mesoderm | 7.46e-11 | 120 |
respiratory system | 2.47e-10 | 42 |
gland of gut | 2.64e-10 | 24 |
thymus | 3.15e-10 | 23 |
neck | 3.15e-10 | 23 |
respiratory system epithelium | 3.15e-10 | 23 |
hemolymphoid system gland | 3.15e-10 | 23 |
pharyngeal epithelium | 3.15e-10 | 23 |
thymic region | 3.15e-10 | 23 |
pharyngeal gland | 3.15e-10 | 23 |
entire pharyngeal arch endoderm | 3.15e-10 | 23 |
thymus primordium | 3.15e-10 | 23 |
early pharyngeal endoderm | 3.15e-10 | 23 |
respiratory tract | 3.42e-10 | 41 |
pharynx | 2.65e-09 | 24 |
upper respiratory tract | 2.65e-09 | 24 |
chordate pharynx | 2.65e-09 | 24 |
pharyngeal arch system | 2.65e-09 | 24 |
pharyngeal region of foregut | 2.65e-09 | 24 |
foregut | 4.53e-09 | 80 |
connective tissue | 2.14e-07 | 46 |
bone marrow | 3.66e-07 | 16 |
segment of respiratory tract | 4.98e-07 | 27 |