FFCP PHASE1:Hg19::chr17:76853697..76853720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76853697..76853720,- | |||
|coexpression_cluster_id=C706 | |||
|description=CAGE_peak_at_chr17:76853697..76853720,- | |description=CAGE_peak_at_chr17:76853697..76853720,- | ||
|id=chr17:76853697..76853720,- | |id=chr17:76853697..76853720,- | ||
|ontology_enrichment_celltype=CL:0000055!3.25e-27!180;CL:0000057!1.28e-15!75;CL:0000222!2.93e-12!119;CL:0000183!1.79e-10!59;CL:0000680!5.66e-10!57;CL:0000056!5.66e-10!57;CL:0000355!5.66e-10!57;CL:0000192!9.19e-10!42;CL:0000514!9.19e-10!42;CL:0000187!3.92e-09!54;CL:0000048!2.00e-08!430;CL:0000499!8.16e-08!27;CL:0000144!8.40e-08!625;CL:0000393!1.02e-07!60;CL:0000211!1.02e-07!60;CL:0000723!1.69e-07!436;CL:0002371!3.44e-07!591;CL:0000359!5.11e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.25e-27!180;CL:0000057!1.28e-15!75;CL:0000222!2.93e-12!119;CL:0000183!1.79e-10!59;CL:0000680!5.66e-10!57;CL:0000056!5.66e-10!57;CL:0000355!5.66e-10!57;CL:0000192!9.19e-10!42;CL:0000514!9.19e-10!42;CL:0000187!3.92e-09!54;CL:0000048!2.00e-08!430;CL:0000499!8.16e-08!27;CL:0000144!8.40e-08!625;CL:0000393!1.02e-07!60;CL:0000211!1.02e-07!60;CL:0000723!1.69e-07!436;CL:0002371!3.44e-07!591;CL:0000359!5.11e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.31e-08;55!CL:0000499;2.46e-08;28!CL:0000192;3.98e-07;43!CL:0000057;6.51e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.52e-16,76;CL:0000048,4.19e-12,427;CL:0000723,4.25e-11,433;CL:0000222,1.86e-10,121;CL:0000034,7.72e-10,441;CL:0000192,1.43e-09,43;CL:0000514,1.43e-09,43;CL:0000680,8.09e-09,58;CL:0000056,8.09e-09,58;CL:0000355,8.09e-09,58;CL:0000499,2.95e-08,28;CL:0000187,6.50e-08,55;CL:0002320,2.40e-07,361;CL:0000219,8.03e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;3.98e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.58e-11!659;UBERON:0000914!3.55e-10!83;UBERON:0002329!3.55e-10!83;UBERON:0003077!3.55e-10!83;UBERON:0003059!3.55e-10!83;UBERON:0007282!3.55e-10!83;UBERON:0009618!3.55e-10!83;UBERON:0007285!3.55e-10!83;UBERON:0004290!6.47e-10!70;UBERON:0000467!1.09e-09!625;UBERON:0005256!1.80e-09!143;UBERON:0000480!1.84e-09!626;UBERON:0001134!7.74e-09!61;UBERON:0002036!7.74e-09!61;UBERON:0003082!7.74e-09!61;UBERON:0002385!9.47e-09!63;UBERON:0001015!9.47e-09!63;UBERON:0000383!9.47e-09!63;UBERON:0000926!2.81e-08!448;UBERON:0004120!2.81e-08!448;UBERON:0006603!2.81e-08!448;UBERON:0000486!3.51e-07!82;UBERON:0002049!3.79e-07!79;UBERON:0007798!3.79e-07!79;UBERON:0002204!5.49e-07!167;UBERON:0004872!6.05e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.48e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.34e-11,315;UBERON:0004120,8.34e-11,315;UBERON:0006603,8.34e-11,315;UBERON:0007503,5.87e-10,78;UBERON:0007524,4.56e-09,73;UBERON:0003077,8.55e-09,72;UBERON:0007285,8.55e-09,72;UBERON:0002329,1.08e-08,71;UBERON:0003059,1.08e-08,71;UBERON:0007282,1.08e-08,71;UBERON:0004290,1.08e-08,71;UBERON:0009618,1.08e-08,71;UBERON:0005256,1.83e-08,122;UBERON:0001134,6.03e-08,62;UBERON:0002036,6.03e-08,62;UBERON:0003082,6.03e-08,62;UBERON:0002385,7.32e-08,64;UBERON:0001015,7.32e-08,64;UBERON:0000383,7.32e-08,64 | |||
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|phase1_expression=4.36028110249336,12.631930909568,3.66481450649525,10.007329835313,4.91657203870017,11.3404008133048,5.06599756336621,0.631719873426831,1.82829939739887,0.245733936501509,2.79120467188971,0.655324116390517,1.05506791291381,1.36142988256051,1.32558950291166,3.36162573225888,6.02694528023977,5.11217063271161,2.43966399395253,1.23121058076788,1.63200552995402,1.56727360739044,1.71741592278634,2.18999080116615,1.50651167513763,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0.434021741431704,2.01523926815932,1.6194683300949,0.515151135268373,2.32637182047304,0.755751887377619,1.69808842831471,1.39457422143411,1.23350366406548,1.23882548358041,2.8769239232215,0.512321413058201,1.89185783910868,0.689491361473237,3.22742341791913,0,2.44715041405386,2.45615535052061,0.224723484445085,1.53041946185451,0.641858054152187,2.55734850319616,0.329851300186716,0.997318288108159,0.852449501065388,0.870627715885752,1.13477044938228,2.4912889959823,1.25624332628372,0.521482918420201,0.434377689410233,3.02699751316684,0.368277635987565,0,0.422510572623884,0.425208599930087,0.209658645508376,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,1.44575660953827,3.00802746381534,3.47631645505977,2.3858578411533,1.45990461090791,0.850813354476611,1.77383517970051,1.31752178539689,1.17881167947941,0,0,0.649094787309367,1.39303789839414,3.72282289452822,0,0,0,0.993812036833525,0,0,0,2.09749718104953,2.47606237746061,1.46296476575767,2.06733407335463,0.35576626268671,1.00416183829401,1.20848795132744,0.760272105718513,2.68468263302986,0,7.29127753093584,0.535798369704479,0.898117490504679,0.225222960966644,0,1.89853131913626,0.732806975721629,0,0,0,2.48485975847659,5.06522046658319,0.794455084879313,7.45775213946916,2.12801029319014,2.24271040056923,2.1349799145941,3.20667812942308,0.622422070799533,2.42479209725439,1.9615428373615,1.51357427644931,2.88087962239999,1.64025002283658,3.43376084513353,0.570471821544449,3.58676833324323,1.05691048779388,1.29498355494505,0.842704840213491,1.42907919878425,2.94802361548243,4.23635702820638,7.12801714369232,9.89067717114228,3.64064544775211,3.59309070908119,1.68336113954066,3.62843707628696,0.277064115484183,1.31693286264251,5.21029252858333,6.30999847407706,0.567160915800105,1.4351170855109,4.05759038755278,2.96704661623387,3.90118424909723,2.37020817248409,1.28820270022815,2.79175284497385,2.36286865137773,3.41029518064195,1.26216887122057,3.22174645248048,5.33431987502079,5.68015348026583,3.72782763442269,1.52604533079439,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,1.56449532329816,10.2918550110862,1.38134921352481,7.42988684851167,6.49691533502627,1.18306800039844,0.337169380156203,1.20505514941741,1.10293972732394,0.871517776369625,0.474541238222193,0.808987848960987,0.392442930250692,1.53898862778556,2.95262181849859,0,2.057870056657,4.41026134156626,0,0,1.18157981336281,0,0.983907508344908,0.343135620597051,0.329250856225877,0,0,0,1.3032332212413,0,0,0.579652024875384,0.821860859650752,1.44366447761074,0.462985512576611,1.33177906564219,0,0,1.47730203652438,2.10603838625314,2.67536092119711,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,2.73040945456327,5.34783795781589,8.20522130470329,1.71072446022705,6.78661451841935,7.50857644609794,4.57322292208925,1.12131084345361,3.05172048183296,1.54010400223995,1.93907573636667,10.7296933755565,1.690605505112,6.91439103120663,5.2003718455683,0.257207374262142,2.83698264046557,1.3321108950805,2.14466990487221,1.62786481617433,0.823240336780769,0.325736184293735,1.42156779497018,0,1.50719688529793,1.74306691720059,6.59821741801577,8.51366464488333,5.52482800575339,8.43335757932127,2.15662369942424,4.59447743336456,0,2.60606352001643,4.31500277355805,1.96967059563885,0,0,0,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0,0.749007023947182,11.966458368161,0.828831026872071,2.69921281782108,3.00102312635806,2.17012018959788,8.52680532276309,12.8468871933956,4.41566762095017,2.6942525448324,2.70851489754947,9.09630016223939,8.27784570340039,3.32112799267718,1.84369168541703,4.86548241021264,4.30762546418029,6.51972505240626,0,1.07857100409308,0.213455115606889,0.909382714338778,0,1.20956117331872,5.95458738765064,0.460385919864187,13.1910244383545,8.20090555236486,7.16390148693385,7.23842645146234,7.42090332224955,5.85996836450091,3.01854933032316,0.9033987161519,2.07701771673448,2.90525946149898,1.20859449591622,1.20303882181971,0.184161977871793,3.78887678943202,4.18809686415449,4.45823010862042,0.902399225814824,0.15403067420883,0,5.84556898613043,1.68882606228601,3.4120015221269,1.19065593693561,0.863663664408557,4.62681758070868,1.62567862526312,4.01351819083883,0.509752546090077,0,1.34324852833307,0,0,0.769350375349168,3.93617574839647,3.2537839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| ||
|short_description=p@chr17:76853697..76853720,- | |short_description=p@chr17:76853697..76853720,- | ||
}} | }} |
Latest revision as of 22:08, 25 July 2015
Short description: | p@chr17:76853697..76853720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76853697..76853720, - |
Coexpression cluster: | C706_Adipocyte_Preadipocyte_tenocyte_leiomyoma_chorionic_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.52e-16 | 76 |
multi fate stem cell | 4.19e-12 | 427 |
somatic stem cell | 4.25e-11 | 433 |
mesodermal cell | 1.86e-10 | 121 |
stem cell | 7.72e-10 | 441 |
smooth muscle cell | 1.43e-09 | 43 |
smooth muscle myoblast | 1.43e-09 | 43 |
muscle precursor cell | 8.09e-09 | 58 |
myoblast | 8.09e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.09e-09 | 58 |
stromal cell | 2.95e-08 | 28 |
muscle cell | 6.50e-08 | 55 |
connective tissue cell | 2.40e-07 | 361 |
motile cell | 8.03e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.34e-11 | 315 |
mesoderm-derived structure | 8.34e-11 | 315 |
presumptive mesoderm | 8.34e-11 | 315 |
epithelial vesicle | 5.87e-10 | 78 |
dense mesenchyme tissue | 4.56e-09 | 73 |
paraxial mesoderm | 8.55e-09 | 72 |
presumptive paraxial mesoderm | 8.55e-09 | 72 |
somite | 1.08e-08 | 71 |
presomitic mesoderm | 1.08e-08 | 71 |
presumptive segmental plate | 1.08e-08 | 71 |
dermomyotome | 1.08e-08 | 71 |
trunk paraxial mesoderm | 1.08e-08 | 71 |
trunk mesenchyme | 1.83e-08 | 122 |
skeletal muscle tissue | 6.03e-08 | 62 |
striated muscle tissue | 6.03e-08 | 62 |
myotome | 6.03e-08 | 62 |
muscle tissue | 7.32e-08 | 64 |
musculature | 7.32e-08 | 64 |
musculature of body | 7.32e-08 | 64 |