FFCP PHASE1:Hg19::chr18:43914051..43914066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=494470 | |EntrezGene=494470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31696 | |HGNC=31696 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZSG1,B3KVD1 | |UniProt=Q6ZSG1,B3KVD1 | ||
|association_with_transcript=-120bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | |association_with_transcript=-120bp_to_ENST00000269439,ENST00000543885,NM_152470,uc002lbz.2,uc002lca.1,uc002lcb.1,uc010dnn.1_5end | ||
|cluster_id=chr18:43914051..43914066,+ | |||
|coexpression_cluster_id=C1799 | |||
|description=CAGE_peak_5_at_RNF165_5end | |description=CAGE_peak_5_at_RNF165_5end | ||
|id=chr18:43914051..43914066,+ | |id=chr18:43914051..43914066,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.01e-08!8 | |ontology_enrichment_celltype=CL:0000047!2.01e-08!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.11e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;6.47e-08;4!DOID:3905;1.57e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,4.88e-08,4;DOID:3905,1.39e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.30e-22!94;UBERON:0001016!5.30e-22!94;UBERON:0001017!2.84e-20!82;UBERON:0005743!1.35e-19!86;UBERON:0000924!9.24e-17!173;UBERON:0006601!9.24e-17!173;UBERON:0004121!4.07e-16!169;UBERON:0001049!1.38e-15!57;UBERON:0005068!1.38e-15!57;UBERON:0006241!1.38e-15!57;UBERON:0007135!1.38e-15!57;UBERON:0002346!3.64e-15!90;UBERON:0002780!3.97e-15!41;UBERON:0001890!3.97e-15!41;UBERON:0006240!3.97e-15!41;UBERON:0000955!9.49e-15!69;UBERON:0006238!9.49e-15!69;UBERON:0003080!1.42e-14!42;UBERON:0003075!1.46e-14!86;UBERON:0007284!1.46e-14!86;UBERON:0002616!1.60e-14!59;UBERON:0001893!1.45e-13!34;UBERON:0002791!1.18e-12!33;UBERON:0003056!1.48e-12!61;UBERON:0001869!3.15e-12!32;UBERON:0002020!4.30e-12!34;UBERON:0003528!4.30e-12!34;UBERON:0002619!1.20e-11!22;UBERON:0000956!6.81e-11!25;UBERON:0000203!6.81e-11!25;UBERON:0000153!1.26e-10!129;UBERON:0007811!1.26e-10!129;UBERON:0000033!7.96e-10!123;UBERON:0001950!1.03e-09!20;UBERON:0007023!2.17e-09!115;UBERON:0000013!4.30e-07!5;UBERON:0002410!4.30e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.32e-15;2!UBERON:0002757;2.32e-15;2!UBERON:0010134;2.32e-15;2!UBERON:0005408;2.32e-15;2!UBERON:0001899;2.32e-15;2!UBERON:0001950;1.62e-08;20!UBERON:0001301;2.55e-08;1!UBERON:0003296;4.01e-08;4!UBERON:0010133;4.01e-08;4!UBERON:0002784;4.01e-08;4!UBERON:0002619;9.36e-08;22!UBERON:0000956;7.83e-07;25!UBERON:0000203;7.83e-07;25!UBERON:0002021;9.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.56e-15,2;UBERON:0002757,1.56e-15,2;UBERON:0010134,1.56e-15,2;UBERON:0005408,1.56e-15,2;UBERON:0001899,1.56e-15,2;UBERON:0001016,9.98e-13,89;UBERON:0001017,2.05e-10,81;UBERON:0001950,1.73e-08,20;UBERON:0001301,1.98e-08,1;UBERON:0003296,3.29e-08,4;UBERON:0010133,3.29e-08,4;UBERON:0002784,3.29e-08,4;UBERON:0002619,9.93e-08,22;UBERON:0002780,1.17e-07,41;UBERON:0001890,1.17e-07,41;UBERON:0003080,1.17e-07,41;UBERON:0006240,1.17e-07,41;UBERON:0000073,1.89e-07,53;UBERON:0002616,1.89e-07,53;UBERON:0001049,5.33e-07,56;UBERON:0005068,5.33e-07,56;UBERON:0006241,5.33e-07,56;UBERON:0007135,5.33e-07,56;UBERON:0000955,5.44e-07,68;UBERON:0006238,5.44e-07,68;UBERON:0000956,8.24e-07,25;UBERON:0000203,8.24e-07,25;UBERON:0011216,8.25e-07,223 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.829288440122964,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0.949082476444386,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,2.46535615237033,0,0,0,0,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,1.54011643535698,0.76228387266739,3.90419561572865,5.41302168944387,4.69045542936177,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.576570202095319,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,14.4371978289504,0,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,5.98841394003583,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,1.52581736317083,0.331737779793674,0,0.219385397153973,0.21787692703798,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,6.42752799424029,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0.580537987734511,1.75414361006845,0.985385484638511,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0.586654148204409,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0.482259445395058,0.412618309791701,0,0,0,0.485996453264197,0,0,0,0,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.625954653532499,0,0.221858103073705,0.18628920882415,0.830091809617385,0,0,0.285465333544967,0,0.936669811613763,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.213383459388282,0,0,0,0.279759015438889,1.24415452006595,2.30209868346573,0.215649622793364,0.786329709279482,1.20130602011215,0.509197589862076,0.212574920101683,0,0.558644917973244,0,0.23658523500376,0,0.352675943690684,0,0.256916900385838,1.41696576325585,0,0,7.05800749420811,0.414943514785307,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.742913430802341,0,0.206686796501184,0.253663240775627,4.92277328116398,0,0,0,0.127762427639595,4.82131652290458,1.68141861109412,0,0,0,0.115233987555779,0,0.0679697329768317,0.394636641377094,0,0.444925607568277,0.078493092850514,0,0,0,0,0,0.142953088353313,0.790068058663633,0,0.521574816907738,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,4.6392577253528,0,0.935757853848423,0,0,0,1.53916723443601,1.81155412280008,0,0,0,0,0,0,0,0.4226557275834,0,0.469919589899268,0.193373663920732,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0.157771562193185,0.815897882290976,4.36350690340377,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0.952257725854961,0.193766729508018,0.186224142887574,0.560659312903067,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0.89543595472072,0.320182037633146,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p5@RNF165 | |short_description=p5@RNF165 | ||
}} | }} |
Latest revision as of 15:17, 19 September 2015
Short description: | p5@RNF165 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF165_5end |
Coexpression cluster: | C1799_occipital_duodenum_temporal_Wilms_brain_pineal_parietal |
Association with transcript: | -120bp_to_ENST00000269439, ENST00000543885, NM_152470, uc002lbz.2, uc002lca.1, uc002lcb.1, uc010dnn.1_5end |
EntrezGene: | RNF165 |
HGNC: | 31696 |
UniProt: | Q6ZSG1B3KVD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.11e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.56e-15 | 2 |
regional part of epithalamus | 1.56e-15 | 2 |
secretory circumventricular organ | 1.56e-15 | 2 |
circumventricular organ | 1.56e-15 | 2 |
epithalamus | 1.56e-15 | 2 |
nervous system | 9.98e-13 | 89 |
central nervous system | 2.05e-10 | 81 |
neocortex | 1.73e-08 | 20 |
epididymis | 1.98e-08 | 1 |
gland of diencephalon | 3.29e-08 | 4 |
neuroendocrine gland | 3.29e-08 | 4 |
regional part of diencephalon | 3.29e-08 | 4 |
regional part of cerebral cortex | 9.93e-08 | 22 |
regional part of forebrain | 1.17e-07 | 41 |
forebrain | 1.17e-07 | 41 |
anterior neural tube | 1.17e-07 | 41 |
future forebrain | 1.17e-07 | 41 |
regional part of nervous system | 1.89e-07 | 53 |
regional part of brain | 1.89e-07 | 53 |
neural tube | 5.33e-07 | 56 |
neural rod | 5.33e-07 | 56 |
future spinal cord | 5.33e-07 | 56 |
neural keel | 5.33e-07 | 56 |
brain | 5.44e-07 | 68 |
future brain | 5.44e-07 | 68 |
cerebral cortex | 8.24e-07 | 25 |
pallium | 8.24e-07 | 25 |
organ system subdivision | 8.25e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 4.88e-08 | 4 |
lung carcinoma | 1.39e-07 | 9 |