FFCP PHASE1:Hg19::chr11:11863500..11863576,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:11863500..11863576,+
|short_description=p1@USP47
|description=CAGE_peak_1_at_USP47_5end
|association_with_transcript=0bp_to_ENST00000525267,ENST0000052773...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55031 | |EntrezGene=55031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20076 | |HGNC=20076 | ||
|UniProt=E9PQC0, | |TSSclassifier=strong | ||
|UniProt=E9PQC0,E9PM46 | |||
|association_with_transcript=0bp_to_ENST00000525267,ENST00000527733,ENST00000539466_5end | |||
|cluster_id=chr11:11863500..11863576,+ | |||
|coexpression_cluster_id=C3091 | |||
|description=CAGE_peak_1_at_USP47_5end | |||
|id=chr11:11863500..11863576,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.17e-25!140;CL:0000037!1.17e-22!172;CL:0000566!1.17e-22!172;CL:0002032!2.66e-20!165;CL:0000837!2.66e-20!165;CL:0002031!3.96e-20!124;CL:0000988!1.09e-19!182;CL:0002087!1.28e-17!119;CL:0000766!2.03e-15!76;CL:0000557!1.56e-13!71;CL:0000763!1.79e-13!112;CL:0000049!1.79e-13!112;CL:0000860!4.04e-13!45;CL:0002057!5.56e-13!42;CL:0000839!1.59e-12!70;CL:0002009!4.88e-11!65;CL:0002194!3.29e-10!63;CL:0000576!3.29e-10!63;CL:0000040!3.29e-10!63;CL:0000559!3.29e-10!63;CL:0000791!3.76e-08!18;CL:0000789!3.76e-08!18;CL:0002420!3.76e-08!18;CL:0002419!3.76e-08!18;CL:0000790!3.76e-08!18;CL:0000838!2.54e-07!52;CL:0000542!6.37e-07!53;CL:0000051!6.37e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-11;33!CL:0002057;1.15e-11;33!CL:0000576;1.84e-08;48!CL:0000791;4.05e-08;18!CL:0000789;4.05e-08;18!CL:0002419;4.05e-08;18!CL:0000473;1.30e-07;39!CL:0000234;1.30e-07;39!CL:0000766;3.34e-07;69!CL:0002087;7.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.72e-25,136;CL:0000037,5.48e-22,168;CL:0002032,1.18e-19,161;CL:0000837,1.18e-19,161;CL:0000988,1.27e-19,177;CL:0002031,1.64e-19,120;CL:0002087,5.12e-17,115;CL:0000766,7.09e-15,72;CL:0000557,5.39e-13,67;CL:0000860,5.56e-13,42;CL:0002057,5.56e-13,42;CL:0000763,6.71e-13,108;CL:0000049,6.71e-13,108;CL:0000839,5.50e-12,66;CL:0002009,1.67e-10,61;CL:0000473,4.50e-10,48;CL:0000234,4.50e-10,48;CL:0002194,1.12e-09,59;CL:0000576,1.12e-09,59;CL:0000040,1.12e-09,59;CL:0000559,1.12e-09,59;CL:0000791,3.76e-08,18;CL:0000789,3.76e-08,18;CL:0002420,3.76e-08,18;CL:0002419,3.76e-08,18;CL:0000790,3.76e-08,18;CL:0000838,2.54e-07,52;CL:0000542,6.37e-07,53;CL:0000051,6.37e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;8.22e-10;42!CL:0000790;4.05e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-24!115;UBERON:0001049!1.52e-12!57;UBERON:0005068!1.52e-12!57;UBERON:0006241!1.52e-12!57;UBERON:0007135!1.52e-12!57;UBERON:0002390!3.47e-12!102;UBERON:0003061!3.47e-12!102;UBERON:0002616!5.42e-11!59;UBERON:0003080!9.67e-11!42;UBERON:0002780!1.91e-10!41;UBERON:0001890!1.91e-10!41;UBERON:0006240!1.91e-10!41;UBERON:0002371!2.70e-10!80;UBERON:0000955!3.47e-10!69;UBERON:0006238!3.47e-10!69;UBERON:0002193!4.34e-10!112;UBERON:0001474!4.92e-10!86;UBERON:0001017!4.98e-10!82;UBERON:0005743!6.46e-09!86;UBERON:0000073!1.89e-08!94;UBERON:0001016!1.89e-08!94;UBERON:0002020!6.39e-08!34;UBERON:0003528!6.39e-08!34;UBERON:0004765!8.89e-08!101;UBERON:0001434!8.89e-08!101;UBERON:0002405!1.56e-07!115;UBERON:0002791!2.38e-07!33;UBERON:0001893!2.46e-07!34;UBERON:0001869!9.72e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.39e-08;41!UBERON:0001890;5.39e-08;41!UBERON:0007023;1.70e-07;114!UBERON:0000073;3.39e-07;53!UBERON:0002616;3.39e-07;53!UBERON:0003528;9.04e-07;34!UBERON:0002020;9.04e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.59e-24,114;UBERON:0001049,3.00e-12,56;UBERON:0005068,3.00e-12,56;UBERON:0006241,3.00e-12,56;UBERON:0007135,3.00e-12,56;UBERON:0002390,1.26e-11,98;UBERON:0003061,1.26e-11,98;UBERON:0000073,2.98e-11,53;UBERON:0002616,2.98e-11,53;UBERON:0002780,1.91e-10,41;UBERON:0001890,1.91e-10,41;UBERON:0003080,1.91e-10,41;UBERON:0006240,1.91e-10,41;UBERON:0000955,6.45e-10,68;UBERON:0006238,6.45e-10,68;UBERON:0001017,9.04e-10,81;UBERON:0002371,9.37e-10,76;UBERON:0002193,1.48e-09,108;UBERON:0001474,1.70e-09,82;UBERON:0001016,3.33e-09,89;UBERON:0002405,1.83e-08,93;UBERON:0003528,6.39e-08,34;UBERON:0002020,6.39e-08,34;UBERON:0004765,1.35e-07,90;UBERON:0001893,2.46e-07,34;UBERON:0002791,3.93e-07,32;UBERON:0003075,6.47e-07,82;UBERON:0007284,6.47e-07,82;UBERON:0002346,8.23e-07,86;UBERON:0001869,9.72e-07,32 | |||
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| ||
|short_description=p1@USP47 | |||
}} | }} |
Latest revision as of 01:08, 16 September 2015
Short description: | p1@USP47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP47_5end |
Coexpression cluster: | C3091_granulocyte_Neutrophils_optic_skeletal_Eosinophils_immature_CD4 |
Association with transcript: | 0bp_to_ENST00000525267, ENST00000527733, ENST00000539466_5end |
EntrezGene: | USP47 |
HGNC: | 20076 |
UniProt: | E9PQC0E9PM46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.59e-24 | 114 |
neural tube | 3.00e-12 | 56 |
neural rod | 3.00e-12 | 56 |
future spinal cord | 3.00e-12 | 56 |
neural keel | 3.00e-12 | 56 |
hematopoietic system | 1.26e-11 | 98 |
blood island | 1.26e-11 | 98 |
regional part of nervous system | 2.98e-11 | 53 |
regional part of brain | 2.98e-11 | 53 |
regional part of forebrain | 1.91e-10 | 41 |
forebrain | 1.91e-10 | 41 |
anterior neural tube | 1.91e-10 | 41 |
future forebrain | 1.91e-10 | 41 |
brain | 6.45e-10 | 68 |
future brain | 6.45e-10 | 68 |
central nervous system | 9.04e-10 | 81 |
bone marrow | 9.37e-10 | 76 |
hemolymphoid system | 1.48e-09 | 108 |
bone element | 1.70e-09 | 82 |
nervous system | 3.33e-09 | 89 |
immune system | 1.83e-08 | 93 |
brain grey matter | 6.39e-08 | 34 |
gray matter | 6.39e-08 | 34 |
skeletal element | 1.35e-07 | 90 |
telencephalon | 2.46e-07 | 34 |
regional part of telencephalon | 3.93e-07 | 32 |
neural plate | 6.47e-07 | 82 |
presumptive neural plate | 6.47e-07 | 82 |
neurectoderm | 8.23e-07 | 86 |
cerebral hemisphere | 9.72e-07 | 32 |