FFCP PHASE1:Hg19::chr19:50016446..50016531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2217 | |EntrezGene=2217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3621 | |HGNC=3621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pof.1_5end | |association_with_transcript=0bp_to_uc002pof.1_5end | ||
|cluster_id=chr19:50016446..50016531,+ | |||
|description=CAGE_peak_1_at_FCGRT_5end | |description=CAGE_peak_1_at_FCGRT_5end | ||
|id=chr19:50016446..50016531,+ | |id=chr19:50016446..50016531,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.43e-19!42;CL:0002194!5.91e-17!63;CL:0000576!5.91e-17!63;CL:0000040!5.91e-17!63;CL:0000559!5.91e-17!63;CL:0002009!3.12e-16!65;CL:0000860!1.92e-15!45;CL:0000839!3.17e-15!70;CL:0000557!5.31e-15!71;CL:0000766!7.87e-15!76;CL:0000763!4.84e-07!112;CL:0000049!4.84e-07!112 | |ontology_enrichment_celltype=CL:0002057!3.43e-19!42;CL:0002194!5.91e-17!63;CL:0000576!5.91e-17!63;CL:0000040!5.91e-17!63;CL:0000559!5.91e-17!63;CL:0002009!3.12e-16!65;CL:0000860!1.92e-15!45;CL:0000839!3.17e-15!70;CL:0000557!5.31e-15!71;CL:0000766!7.87e-15!76;CL:0000763!4.84e-07!112;CL:0000049!4.84e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.18e-14;39!CL:0000234;6.18e-14;39!CL:0000860;1.38e-13;33!CL:0002057;1.38e-13;33!CL:0000576;2.08e-13;48!CL:0000766;5.00e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.17e-22,48;CL:0000234,3.17e-22,48;CL:0002194,2.62e-20,59;CL:0000576,2.62e-20,59;CL:0000040,2.62e-20,59;CL:0000559,2.62e-20,59;CL:0002009,2.05e-19,61;CL:0000860,3.19e-19,42;CL:0002057,3.19e-19,42;CL:0000839,3.47e-18,66;CL:0000557,6.63e-18,67;CL:0000766,1.39e-17,72;CL:0000763,2.26e-08,108;CL:0000049,2.26e-08,108;CL:0002087,2.73e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;5.01e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.20e-17!115;UBERON:0003081!5.99e-13!216;UBERON:0002371!5.11e-12!80;UBERON:0002193!8.97e-12!112;UBERON:0001474!6.44e-11!86;UBERON:0002390!1.00e-10!102;UBERON:0003061!1.00e-10!102;UBERON:0004765!1.13e-08!101;UBERON:0001434!1.13e-08!101;UBERON:0007023!4.24e-08!115;UBERON:0000926!7.94e-08!448;UBERON:0004120!7.94e-08!448;UBERON:0006603!7.94e-08!448;UBERON:0000922!4.38e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.85e-15,93;UBERON:0002371,2.30e-14,76;UBERON:0002193,1.17e-13,108;UBERON:0003081,1.18e-13,203;UBERON:0001474,5.68e-13,82;UBERON:0002390,1.48e-12,98;UBERON:0003061,1.48e-12,98;UBERON:0004765,1.53e-12,90;UBERON:0001434,5.45e-11,100;UBERON:0000926,6.11e-11,315;UBERON:0004120,6.11e-11,315;UBERON:0006603,6.11e-11,315;UBERON:0007023,3.58e-08,114;UBERON:0002204,8.95e-08,167;UBERON:0000922,1.80e-07,592;UBERON:0005423,4.30e-07,581 | |||
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| ||
|short_description=p1@FCGRT | |short_description=p1@FCGRT | ||
}} | }} |
Latest revision as of 07:57, 19 September 2015
Short description: | p1@FCGRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCGRT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002pof.1_5end |
EntrezGene: | FCGRT |
HGNC: | 3621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.17e-22 | 48 |
phagocyte | 3.17e-22 | 48 |
monopoietic cell | 2.62e-20 | 59 |
monocyte | 2.62e-20 | 59 |
monoblast | 2.62e-20 | 59 |
promonocyte | 2.62e-20 | 59 |
macrophage dendritic cell progenitor | 2.05e-19 | 61 |
classical monocyte | 3.19e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.19e-19 | 42 |
myeloid lineage restricted progenitor cell | 3.47e-18 | 66 |
granulocyte monocyte progenitor cell | 6.63e-18 | 67 |
myeloid leukocyte | 1.39e-17 | 72 |
myeloid cell | 2.26e-08 | 108 |
common myeloid progenitor | 2.26e-08 | 108 |
nongranular leukocyte | 2.73e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.85e-15 | 93 |
bone marrow | 2.30e-14 | 76 |
hemolymphoid system | 1.17e-13 | 108 |
lateral plate mesoderm | 1.18e-13 | 203 |
bone element | 5.68e-13 | 82 |
hematopoietic system | 1.48e-12 | 98 |
blood island | 1.48e-12 | 98 |
skeletal element | 1.53e-12 | 90 |
skeletal system | 5.45e-11 | 100 |
mesoderm | 6.11e-11 | 315 |
mesoderm-derived structure | 6.11e-11 | 315 |
presumptive mesoderm | 6.11e-11 | 315 |
adult organism | 3.58e-08 | 114 |
musculoskeletal system | 8.95e-08 | 167 |
embryo | 1.80e-07 | 592 |
developing anatomical structure | 4.30e-07 | 581 |