FFCP PHASE1:Hg19::chr1:176176305..176176317,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64326 | |EntrezGene=64326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17440 | |HGNC=17440 | ||
|TSSclassifier=strong | |||
|UniProt=E7ES36,Q05CT6,Q8NHY2,Q504W6 | |UniProt=E7ES36,Q05CT6,Q8NHY2,Q504W6 | ||
|association_with_transcript=52bp_to_ENST00000367665,ENST00000436424,NM_001001740,NM_022457,uc001gku.1,uc001gkv.1,uc001gkw.1_5end | |association_with_transcript=52bp_to_ENST00000367665,ENST00000436424,NM_001001740,NM_022457,uc001gku.1,uc001gkv.1,uc001gkw.1_5end | ||
|cluster_id=chr1:176176305..176176317,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_RFWD2_5end | |description=CAGE_peak_4_at_RFWD2_5end | ||
|id=chr1:176176305..176176317,- | |id=chr1:176176305..176176317,- | ||
|ontology_enrichment_celltype=CL:0000738!2.29e-36!140;CL:0000037!1.09e-35!172;CL:0000566!1.09e-35!172;CL:0000988!8.99e-33!182;CL:0002032!2.13e-32!165;CL:0000837!2.13e-32!165;CL:0002087!5.66e-30!119;CL:0002031!4.10e-28!124;CL:0000766!2.52e-22!76;CL:0000763!2.43e-20!112;CL:0000049!2.43e-20!112;CL:0000557!7.44e-19!71;CL:0002009!3.80e-18!65;CL:0002194!1.20e-17!63;CL:0000576!1.20e-17!63;CL:0000040!1.20e-17!63;CL:0000559!1.20e-17!63;CL:0002057!2.38e-17!42;CL:0000839!1.05e-16!70;CL:0000860!8.85e-16!45;CL:0000542!3.71e-11!53;CL:0000051!3.71e-11!53;CL:0000838!6.90e-11!52;CL:0000134!9.03e-08!358;CL:0002320!8.22e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.29e-36!140;CL:0000037!1.09e-35!172;CL:0000566!1.09e-35!172;CL:0000988!8.99e-33!182;CL:0002032!2.13e-32!165;CL:0000837!2.13e-32!165;CL:0002087!5.66e-30!119;CL:0002031!4.10e-28!124;CL:0000766!2.52e-22!76;CL:0000763!2.43e-20!112;CL:0000049!2.43e-20!112;CL:0000557!7.44e-19!71;CL:0002009!3.80e-18!65;CL:0002194!1.20e-17!63;CL:0000576!1.20e-17!63;CL:0000040!1.20e-17!63;CL:0000559!1.20e-17!63;CL:0002057!2.38e-17!42;CL:0000839!1.05e-16!70;CL:0000860!8.85e-16!45;CL:0000542!3.71e-11!53;CL:0000051!3.71e-11!53;CL:0000838!6.90e-11!52;CL:0000134!9.03e-08!358;CL:0002320!8.22e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-14;33!CL:0002057;1.16e-14;33!CL:0000473;6.04e-14;39!CL:0000234;6.04e-14;39!CL:0000576;5.09e-13;48!CL:0000766;2.22e-12;69!CL:0002087;5.61e-11;104!CL:0000738;1.69e-09;136!CL:0000763;1.85e-09;100!CL:0000791;8.64e-09;18!CL:0000789;8.64e-09;18!CL:0002419;8.64e-09;18!CL:0000542;1.44e-08;53!CL:0000094;2.28e-08;8!CL:0000084;3.20e-08;25!CL:0000988;7.03e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.70e-47,136;CL:0000037,3.63e-46,168;CL:0000988,4.41e-42,177;CL:0002032,1.06e-41,161;CL:0000837,1.06e-41,161;CL:0002087,4.00e-40,115;CL:0002031,1.28e-36,120;CL:0000766,1.35e-30,72;CL:0000763,2.08e-26,108;CL:0000049,2.08e-26,108;CL:0000557,4.52e-25,67;CL:0002009,1.16e-24,61;CL:0002194,1.17e-24,59;CL:0000576,1.17e-24,59;CL:0000040,1.17e-24,59;CL:0000559,1.17e-24,59;CL:0000473,4.58e-24,48;CL:0000234,4.58e-24,48;CL:0000839,6.83e-23,66;CL:0000860,1.26e-21,42;CL:0002057,1.26e-21,42;CL:0000542,1.13e-13,53;CL:0000051,1.13e-13,53;CL:0000838,2.61e-13,52;CL:0000134,1.52e-10,354;CL:0002320,1.42e-09,361;CL:0000791,3.12e-09,18;CL:0000789,3.12e-09,18;CL:0002420,3.12e-09,18;CL:0002419,3.12e-09,18;CL:0000790,3.12e-09,18;CL:0000084,1.73e-08,25;CL:0000827,1.73e-08,25;CL:0000094,3.13e-08,8;CL:0000219,5.43e-08,386;CL:0000034,1.83e-07,441;CL:0000723,2.94e-07,433;CL:0000048,2.98e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-15;42!CL:0000790;8.64e-09;18!CL:0000051;1.44e-08;53!CL:0000049;7.84e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-20!102;UBERON:0003061!1.50e-20!102;UBERON:0002193!1.22e-17!112;UBERON:0001474!1.45e-14!86;UBERON:0002371!2.97e-14!80;UBERON:0004765!9.73e-10!101;UBERON:0001434!9.73e-10!101;UBERON:0002405!2.71e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.07e-07;15!UBERON:0000179;6.07e-07;15!UBERON:0000463;6.07e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.74e-29,98;UBERON:0003061,1.74e-29,98;UBERON:0002193,1.07e-26,108;UBERON:0002405,9.95e-21,93;UBERON:0002371,1.34e-20,76;UBERON:0001474,5.98e-20,82;UBERON:0004765,3.21e-16,90;UBERON:0001434,3.33e-13,100;UBERON:0003081,4.12e-11,203;UBERON:0002384,1.49e-08,371;UBERON:0000178,3.58e-07,15;UBERON:0000179,3.58e-07,15;UBERON:0000463,3.58e-07,15 | |||
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| ||
|short_description=p4@RFWD2 | |short_description=p4@RFWD2 | ||
}} | }} |
Latest revision as of 20:04, 18 September 2015
Short description: | p4@RFWD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RFWD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 52bp_to_ENST00000367665, ENST00000436424, NM_001001740, NM_022457, uc001gku.1, uc001gkv.1, uc001gkw.1_5end |
EntrezGene: | RFWD2 |
HGNC: | 17440 |
UniProt: | E7ES36Q05CT6Q8NHY2Q504W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.74e-29 | 98 |
blood island | 1.74e-29 | 98 |
hemolymphoid system | 1.07e-26 | 108 |
immune system | 9.95e-21 | 93 |
bone marrow | 1.34e-20 | 76 |
bone element | 5.98e-20 | 82 |
skeletal element | 3.21e-16 | 90 |
skeletal system | 3.33e-13 | 100 |
lateral plate mesoderm | 4.12e-11 | 203 |
connective tissue | 1.49e-08 | 371 |
blood | 3.58e-07 | 15 |
haemolymphatic fluid | 3.58e-07 | 15 |
organism substance | 3.58e-07 | 15 |