FFCP PHASE1:Hg19::chr1:203273760..203273784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-84bp_to_ENST00000425698_5end | |association_with_transcript=-84bp_to_ENST00000425698_5end | ||
|cluster_id=chr1:203273760..203273784,- | |||
|coexpression_cluster_id=C1561 | |||
|description=CAGE_peak_1_at_ENST00000425698_5end | |description=CAGE_peak_1_at_ENST00000425698_5end | ||
|id=chr1:203273760..203273784,- | |id=chr1:203273760..203273784,- | ||
|ontology_enrichment_celltype=CL:0002057!2.11e-75!42;CL:0000860!1.84e-69!45;CL:0000766!5.84e-59!76;CL:0000738!2.83e-52!140;CL:0002009!1.51e-47!65;CL:0000557!2.45e-47!71;CL:0002194!4.41e-47!63;CL:0000576!4.41e-47!63;CL:0000040!4.41e-47!63;CL:0000559!4.41e-47!63;CL:0000839!5.83e-46!70;CL:0002087!1.38e-43!119;CL:0000037!9.19e-42!172;CL:0000566!9.19e-42!172;CL:0002031!2.69e-41!124;CL:0002032!2.88e-41!165;CL:0000837!2.88e-41!165;CL:0000763!6.20e-40!112;CL:0000049!6.20e-40!112;CL:0000988!2.22e-38!182;CL:0002393!2.74e-16!9;CL:0002397!2.74e-16!9;CL:0000094!5.41e-13!8;CL:0000134!2.91e-10!358;CL:0002320!9.80e-10!365;CL:0000081!4.56e-09!11;CL:0000219!6.66e-08!390;CL:0000775!7.10e-08!3 | |ontology_enrichment_celltype=CL:0002057!2.11e-75!42;CL:0000860!1.84e-69!45;CL:0000766!5.84e-59!76;CL:0000738!2.83e-52!140;CL:0002009!1.51e-47!65;CL:0000557!2.45e-47!71;CL:0002194!4.41e-47!63;CL:0000576!4.41e-47!63;CL:0000040!4.41e-47!63;CL:0000559!4.41e-47!63;CL:0000839!5.83e-46!70;CL:0002087!1.38e-43!119;CL:0000037!9.19e-42!172;CL:0000566!9.19e-42!172;CL:0002031!2.69e-41!124;CL:0002032!2.88e-41!165;CL:0000837!2.88e-41!165;CL:0000763!6.20e-40!112;CL:0000049!6.20e-40!112;CL:0000988!2.22e-38!182;CL:0002393!2.74e-16!9;CL:0002397!2.74e-16!9;CL:0000094!5.41e-13!8;CL:0000134!2.91e-10!358;CL:0002320!9.80e-10!365;CL:0000081!4.56e-09!11;CL:0000219!6.66e-08!390;CL:0000775!7.10e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.49e-87;33!CL:0002057;5.49e-87;33!CL:0000473;1.34e-60;39!CL:0000234;1.34e-60;39!CL:0000576;1.53e-42;48!CL:0000766;9.26e-31;69!CL:0000763;4.98e-16;100!CL:0000775;6.52e-16;3!CL:0000094;8.34e-16;8!CL:0002087;3.43e-13;104!CL:0000081;2.08e-11;11!CL:0000771;2.64e-11;2!CL:0000738;6.46e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-81,42;CL:0002057,2.88e-81,42;CL:0000473,2.54e-70,48;CL:0000234,2.54e-70,48;CL:0000766,2.48e-68,72;CL:0002194,5.44e-55,59;CL:0000576,5.44e-55,59;CL:0000040,5.44e-55,59;CL:0000559,5.44e-55,59;CL:0002009,5.17e-53,61;CL:0000839,1.32e-52,66;CL:0000557,9.81e-52,67;CL:0000763,2.22e-43,108;CL:0000049,2.22e-43,108;CL:0000738,1.60e-37,136;CL:0002032,1.42e-30,161;CL:0000837,1.42e-30,161;CL:0002031,1.98e-30,120;CL:0002087,1.33e-29,115;CL:0000037,5.36e-29,168;CL:0000988,3.77e-27,177;CL:0000775,6.21e-16,3;CL:0000094,8.22e-16,8;CL:0000081,2.06e-11,11;CL:0000771,2.70e-11,2;CL:0000134,7.93e-10,354;CL:0002320,1.72e-09,361;CL:0000219,2.65e-08,386;CL:0000048,7.46e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;5.02e-58;42!CL:0000049;6.49e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.40e-49!102;UBERON:0003061!7.40e-49!102;UBERON:0002193!7.57e-45!112;UBERON:0002371!1.76e-40!80;UBERON:0001474!1.04e-36!86;UBERON:0002405!8.31e-31!115;UBERON:0004765!1.00e-30!101;UBERON:0001434!1.00e-30!101;UBERON:0003081!3.14e-16!216;UBERON:0002204!2.80e-14!167;UBERON:0002384!5.09e-09!375;UBERON:0000178!1.05e-07!15;UBERON:0000179!1.05e-07!15;UBERON:0000463!1.05e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.18e-07;15!UBERON:0000179;1.18e-07;15!UBERON:0000463;1.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.46e-48,98;UBERON:0003061,8.46e-48,98;UBERON:0002371,6.32e-45,76;UBERON:0002193,9.44e-43,108;UBERON:0001474,3.31e-41,82;UBERON:0004765,5.21e-37,90;UBERON:0002405,1.28e-35,93;UBERON:0001434,1.07e-32,100;UBERON:0003081,1.87e-19,203;UBERON:0002204,1.75e-18,167;UBERON:0000926,7.69e-11,315;UBERON:0004120,7.69e-11,315;UBERON:0006603,7.69e-11,315;UBERON:0002384,4.97e-09,371;UBERON:0000178,1.22e-07,15;UBERON:0000179,1.22e-07,15;UBERON:0000463,1.22e-07,15 | |||
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| ||
|short_description=p1@ENST00000425698 | |short_description=p1@ENST00000425698 | ||
}} | }} |
Latest revision as of 02:27, 28 July 2015
Short description: | p1@ENST00000425698 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425698_5end |
Coexpression cluster: | C1561_Mast_Eosinophils_Neutrophils_CD14_immature_Whole_Hep2 |
Association with transcript: | -84bp_to_ENST00000425698_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.88e-81 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-81 | 42 |
defensive cell | 2.54e-70 | 48 |
phagocyte | 2.54e-70 | 48 |
myeloid leukocyte | 2.48e-68 | 72 |
monopoietic cell | 5.44e-55 | 59 |
monocyte | 5.44e-55 | 59 |
monoblast | 5.44e-55 | 59 |
promonocyte | 5.44e-55 | 59 |
macrophage dendritic cell progenitor | 5.17e-53 | 61 |
myeloid lineage restricted progenitor cell | 1.32e-52 | 66 |
granulocyte monocyte progenitor cell | 9.81e-52 | 67 |
myeloid cell | 2.22e-43 | 108 |
common myeloid progenitor | 2.22e-43 | 108 |
leukocyte | 1.60e-37 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-30 | 161 |
hematopoietic lineage restricted progenitor cell | 1.98e-30 | 120 |
nongranular leukocyte | 1.33e-29 | 115 |
hematopoietic stem cell | 5.36e-29 | 168 |
hematopoietic cell | 3.77e-27 | 177 |
neutrophil | 6.21e-16 | 3 |
granulocyte | 8.22e-16 | 8 |
blood cell | 2.06e-11 | 11 |
eosinophil | 2.70e-11 | 2 |
mesenchymal cell | 7.93e-10 | 354 |
connective tissue cell | 1.72e-09 | 361 |
motile cell | 2.65e-08 | 386 |
multi fate stem cell | 7.46e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.46e-48 | 98 |
blood island | 8.46e-48 | 98 |
bone marrow | 6.32e-45 | 76 |
hemolymphoid system | 9.44e-43 | 108 |
bone element | 3.31e-41 | 82 |
skeletal element | 5.21e-37 | 90 |
immune system | 1.28e-35 | 93 |
skeletal system | 1.07e-32 | 100 |
lateral plate mesoderm | 1.87e-19 | 203 |
musculoskeletal system | 1.75e-18 | 167 |
mesoderm | 7.69e-11 | 315 |
mesoderm-derived structure | 7.69e-11 | 315 |
presumptive mesoderm | 7.69e-11 | 315 |
connective tissue | 4.97e-09 | 371 |
blood | 1.22e-07 | 15 |
haemolymphatic fluid | 1.22e-07 | 15 |
organism substance | 1.22e-07 | 15 |