FFCP PHASE1:Hg19::chr11:58979658..58979676,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:58979658..58979676,-
|short_description=p3@MPEG1
|description=CAGE_peak_3_at_MPEG1_5end
|association_with_transcript=-85bp_to_AK095457_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219972 | |EntrezGene=219972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29619 | |HGNC=29619 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_AK095457_5end | |||
|cluster_id=chr11:58979658..58979676,- | |||
|coexpression_cluster_id=C3165 | |||
|description=CAGE_peak_3_at_MPEG1_5end | |||
|id=chr11:58979658..58979676,- | |||
|ontology_enrichment_celltype=CL:0002009!1.33e-57!65;CL:0002057!7.53e-55!42;CL:0002194!1.46e-54!63;CL:0000576!1.46e-54!63;CL:0000040!1.46e-54!63;CL:0000559!1.46e-54!63;CL:0000766!1.12e-53!76;CL:0000557!2.10e-51!71;CL:0000860!2.59e-50!45;CL:0000839!1.37e-47!70;CL:0000738!7.50e-47!140;CL:0002087!1.10e-41!119;CL:0000763!1.31e-38!112;CL:0000049!1.31e-38!112;CL:0000037!7.14e-38!172;CL:0000566!7.14e-38!172;CL:0002031!2.43e-36!124;CL:0000988!1.33e-34!182;CL:0002032!3.30e-33!165;CL:0000837!3.30e-33!165;CL:0002393!1.81e-11!9;CL:0002397!1.81e-11!9;CL:0000134!7.07e-08!358;CL:0002320!2.13e-07!365;CL:0000784!3.10e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-49;33!CL:0002057;1.36e-49;33!CL:0000473;8.74e-47;39!CL:0000234;8.74e-47;39!CL:0000576;7.42e-37;48!CL:0000766;1.33e-23;69!CL:0000763;1.33e-14;100!CL:0000784;3.33e-14;3!CL:0002087;5.10e-14;104!CL:0000738;1.95e-12;136!CL:0000988;5.21e-08;177!CL:0000235;7.74e-07;6!CL:0000219;8.46e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.77e-64,48;CL:0000234,3.77e-64,48;CL:0002009,1.05e-63,61;CL:0002194,7.23e-62,59;CL:0000576,7.23e-62,59;CL:0000040,7.23e-62,59;CL:0000559,7.23e-62,59;CL:0000860,9.00e-59,42;CL:0002057,9.00e-59,42;CL:0000557,2.16e-57,67;CL:0000766,1.82e-56,72;CL:0000839,1.33e-54,66;CL:0000738,2.01e-41,136;CL:0000763,1.39e-37,108;CL:0000049,1.39e-37,108;CL:0002087,2.46e-37,115;CL:0002031,1.83e-35,120;CL:0000037,7.10e-32,168;CL:0000988,8.30e-30,177;CL:0002032,8.20e-28,161;CL:0000837,8.20e-28,161;CL:0000784,3.34e-14,3;CL:0000134,1.92e-10,354;CL:0002320,4.56e-10,361;CL:0000219,9.55e-09,386;CL:0000048,3.88e-07,427;CL:0002393,5.20e-07,9;CL:0002397,5.20e-07,9;CL:0000723,6.45e-07,433;CL:0000235,8.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-44;42!CL:0000049;6.14e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-58!102;UBERON:0003061!1.02e-58!102;UBERON:0002193!1.85e-55!112;UBERON:0002371!7.61e-44!80;UBERON:0001474!1.09e-39!86;UBERON:0002405!3.41e-37!115;UBERON:0004765!1.78e-31!101;UBERON:0001434!1.78e-31!101;UBERON:0003081!8.11e-22!216;UBERON:0002204!9.44e-15!167;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0007023!9.15e-08!115;UBERON:0002384!3.63e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.15e-57,98;UBERON:0003061,4.15e-57,98;UBERON:0002193,4.64e-51,108;UBERON:0002371,9.09e-50,76;UBERON:0001474,1.33e-45,82;UBERON:0002405,4.56e-45,93;UBERON:0004765,6.62e-41,90;UBERON:0001434,4.43e-36,100;UBERON:0003081,1.39e-24,203;UBERON:0002204,1.37e-18,167;UBERON:0000926,1.13e-12,315;UBERON:0004120,1.13e-12,315;UBERON:0006603,1.13e-12,315;UBERON:0002384,1.48e-09,371 | |||
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| ||
|short_description=p3@MPEG1 | |||
}} | }} |
Latest revision as of 12:11, 18 September 2015
Short description: | p3@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPEG1_5end |
Coexpression cluster: | C3165_Dendritic_CD14_Monocytederived_Macrophage_splenic_CD14CD16_spleen |
Association with transcript: | -85bp_to_AK095457_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.15e-57 | 98 |
blood island | 4.15e-57 | 98 |
hemolymphoid system | 4.64e-51 | 108 |
bone marrow | 9.09e-50 | 76 |
bone element | 1.33e-45 | 82 |
immune system | 4.56e-45 | 93 |
skeletal element | 6.62e-41 | 90 |
skeletal system | 4.43e-36 | 100 |
lateral plate mesoderm | 1.39e-24 | 203 |
musculoskeletal system | 1.37e-18 | 167 |
mesoderm | 1.13e-12 | 315 |
mesoderm-derived structure | 1.13e-12 | 315 |
presumptive mesoderm | 1.13e-12 | 315 |
connective tissue | 1.48e-09 | 371 |