FFCP PHASE1:Hg19::chr11:60640875..60640891,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:60640875..60640891,+
|short_description=p@chr11:60640875..60640891,+
|description=CAGE_peak_at_chr11:60640875..60640891,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60640875..60640891,+ | |||
|coexpression_cluster_id=C3169 | |||
|description=CAGE_peak_at_chr11:60640875..60640891,+ | |||
|id=chr11:60640875..60640891,+ | |||
|ontology_enrichment_celltype=CL:0000183!5.62e-16!59;CL:0000187!2.99e-15!54;CL:0000055!1.42e-14!180;CL:0000680!5.60e-14!57;CL:0000056!5.60e-14!57;CL:0000355!5.60e-14!57;CL:0000393!7.67e-13!60;CL:0000211!7.67e-13!60;CL:0000192!4.76e-09!42;CL:0000514!4.76e-09!42;CL:0000359!4.48e-08!32;CL:0000188!2.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002549;9.11e-13;2!CL:0002575;1.48e-12;2!CL:0002602;2.02e-12;2!CL:0000187;1.16e-09;55!CL:0002564;8.65e-09;3!CL:0002590;1.97e-08;3!CL:0000708;2.59e-08;3!CL:0000594;2.84e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,8.63e-13,2;CL:0002575,1.53e-12,2;CL:0002602,1.91e-12,2;CL:0000187,7.37e-10,55;CL:0000680,3.04e-09,58;CL:0000056,3.04e-09,58;CL:0000355,3.04e-09,58;CL:0002564,9.00e-09,3;CL:0000393,1.09e-08,61;CL:0000211,1.09e-08,61;CL:0002590,2.04e-08,3;CL:0000708,2.84e-08,3;CL:0000594,2.84e-08,3;CL:0000319,7.39e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000355;4.93e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!9.33e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.21e-13!63;UBERON:0001015!1.21e-13!63;UBERON:0000383!1.21e-13!63;UBERON:0001134!1.98e-13!61;UBERON:0002036!1.98e-13!61;UBERON:0003082!1.98e-13!61;UBERON:0000914!8.35e-13!83;UBERON:0002329!8.35e-13!83;UBERON:0003077!8.35e-13!83;UBERON:0003059!8.35e-13!83;UBERON:0007282!8.35e-13!83;UBERON:0009618!8.35e-13!83;UBERON:0007285!8.35e-13!83;UBERON:0004290!1.61e-12!70;UBERON:0000486!3.70e-10!82;UBERON:0005256!4.43e-09!143;UBERON:0005284!4.69e-09!5;UBERON:0002200!4.12e-08!11;UBERON:0006876!4.12e-08!11;UBERON:0000490!7.98e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;9.09e-19;5!UBERON:0002216;9.09e-19;5!UBERON:0011134;9.09e-19;5!UBERON:0002209;9.09e-19;5!UBERON:0002213;9.09e-19;5!UBERON:0007844;9.09e-19;5!UBERON:0011138;9.09e-19;5!UBERON:0001130;9.09e-19;5!UBERON:0001066;9.09e-19;5!UBERON:0001468;9.09e-19;5!UBERON:0005284;1.30e-18;5!UBERON:0005629;9.11e-13;2!UBERON:0005358;9.11e-13;2!UBERON:0001886;9.11e-13;2!UBERON:0004086;9.11e-13;2!UBERON:0005282;9.11e-13;2!UBERON:0005281;9.11e-13;2!UBERON:0006444;2.02e-12;2!UBERON:0001995;2.02e-12;2!UBERON:0004715;2.02e-12;2!UBERON:0004905;8.98e-12;8!UBERON:0000982;8.98e-12;8!UBERON:0004770;8.98e-12;8!UBERON:0002242;8.65e-09;3!UBERON:0002418;1.46e-08;3!UBERON:0004755;1.46e-08;3!UBERON:0006876;1.65e-08;11!UBERON:0003210;2.59e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,9.14e-19,5;UBERON:0002216,9.14e-19,5;UBERON:0011134,9.14e-19,5;UBERON:0002209,9.14e-19,5;UBERON:0002213,9.14e-19,5;UBERON:0005856,9.14e-19,5;UBERON:0005866,9.14e-19,5;UBERON:0005863,9.14e-19,5;UBERON:0007844,9.14e-19,5;UBERON:0011138,9.14e-19,5;UBERON:0001130,9.14e-19,5;UBERON:0001066,9.14e-19,5;UBERON:0001468,9.14e-19,5;UBERON:0005284,1.31e-18,5;UBERON:0005629,8.63e-13,2;UBERON:0005358,8.63e-13,2;UBERON:0001886,8.63e-13,2;UBERON:0004086,8.63e-13,2;UBERON:0005282,8.63e-13,2;UBERON:0005281,8.63e-13,2;UBERON:0006444,1.91e-12,2;UBERON:0001995,1.91e-12,2;UBERON:0004715,1.91e-12,2;UBERON:0004905,9.01e-12,8;UBERON:0000982,9.01e-12,8;UBERON:0004770,9.01e-12,8;UBERON:0002242,9.00e-09,3;UBERON:0003068,9.00e-09,3;UBERON:0002328,9.00e-09,3;UBERON:0004880,9.00e-09,3;UBERON:0002329,1.21e-08,71;UBERON:0003059,1.21e-08,71;UBERON:0007282,1.21e-08,71;UBERON:0004290,1.21e-08,71;UBERON:0009618,1.21e-08,71;UBERON:0002418,1.41e-08,3;UBERON:0004755,1.41e-08,3;UBERON:0001134,1.62e-08,62;UBERON:0002036,1.62e-08,62;UBERON:0003082,1.62e-08,62;UBERON:0006876,1.65e-08,11;UBERON:0003077,1.71e-08,72;UBERON:0007285,1.71e-08,72;UBERON:0007524,2.40e-08,73;UBERON:0003210,2.84e-08,3;UBERON:0003104,3.03e-08,160;UBERON:0009142,3.03e-08,160;UBERON:0002385,3.46e-08,64;UBERON:0001015,3.46e-08,64;UBERON:0000383,3.46e-08,64;UBERON:0007503,1.15e-07,78;UBERON:0000486,4.54e-07,83 | |||
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|short_description=p@chr11:60640875..60640891,+ | |||
}} | }} |
Latest revision as of 23:17, 23 July 2015
Short description: | p@chr11:60640875..60640891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60640875..60640891, + |
Coexpression cluster: | C3169_Nucleus_Fibroblast_pagetoid_Pericytes_Anulus_Mesenchymal_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 8.63e-13 | 2 |
central nervous system pericyte | 1.53e-12 | 2 |
annulus pulposus cell | 1.91e-12 | 2 |
muscle cell | 7.37e-10 | 55 |
muscle precursor cell | 3.04e-09 | 58 |
myoblast | 3.04e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.04e-09 | 58 |
nucleus pulposus cell of intervertebral disc | 9.00e-09 | 3 |
electrically responsive cell | 1.09e-08 | 61 |
electrically active cell | 1.09e-08 | 61 |
smooth muscle cell of the brain vasculature | 2.04e-08 | 3 |
leptomeningeal cell | 2.84e-08 | 3 |
skeletal muscle satellite cell | 2.84e-08 | 3 |
mucus secreting cell | 7.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.39e-07 | 1 |