FFCP PHASE1:Hg19::chr11:63304273..63304292,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:63304273..63304292,+
|short_description=p2@RARRES3
|description=CAGE_peak_2_at_RARRES3_5end
|association_with_transcript=0bp_to_ENST00000255688,ENST000004...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5920 | |EntrezGene=5920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9869 | |HGNC=9869 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL19 | |UniProt=Q9UL19 | ||
|association_with_transcript=0bp_to_ENST00000255688,ENST00000439013,ENST00000537871,NM_004585,uc001nxf.3_5end | |||
|cluster_id=chr11:63304273..63304292,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_RARRES3_5end | |||
|id=chr11:63304273..63304292,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.90e-30!119;CL:0000738!5.85e-29!140;CL:0002031!5.03e-27!124;CL:0002057!9.28e-21!42;CL:0000037!3.37e-20!172;CL:0000566!3.37e-20!172;CL:0002032!1.06e-18!165;CL:0000837!1.06e-18!165;CL:0000988!2.09e-18!182;CL:0000860!5.45e-18!45;CL:0000838!2.19e-15!52;CL:0000542!2.58e-15!53;CL:0000051!2.58e-15!53;CL:0000766!1.06e-14!76;CL:0002194!1.31e-13!63;CL:0000576!1.31e-13!63;CL:0000040!1.31e-13!63;CL:0000559!1.31e-13!63;CL:0000839!5.08e-13!70;CL:0000791!6.52e-13!18;CL:0000789!6.52e-13!18;CL:0002420!6.52e-13!18;CL:0002419!6.52e-13!18;CL:0000790!6.52e-13!18;CL:0002009!1.22e-12!65;CL:0000557!2.01e-11!71;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000625!9.62e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-15;33!CL:0002057;2.00e-15;33!CL:0000791;1.54e-13;18!CL:0000789;1.54e-13;18!CL:0002419;1.54e-13;18!CL:0000576;5.18e-13;48!CL:0000473;1.09e-11;39!CL:0000234;1.09e-11;39!CL:0002087;1.12e-11;104!CL:0000084;1.50e-10;25!CL:0000542;3.33e-09;53!CL:0000625;3.79e-09;11!CL:0000766;8.54e-09;69!CL:0000738;8.17e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.38e-33,115;CL:0000738,7.54e-31,136;CL:0002031,2.02e-29,120;CL:0000037,6.12e-22,168;CL:0000860,9.42e-22,42;CL:0002057,9.42e-22,42;CL:0002032,1.97e-20,161;CL:0000837,1.97e-20,161;CL:0000988,2.15e-20,177;CL:0000473,5.61e-20,48;CL:0000234,5.61e-20,48;CL:0000766,9.96e-17,72;CL:0002194,3.02e-16,59;CL:0000576,3.02e-16,59;CL:0000040,3.02e-16,59;CL:0000559,3.02e-16,59;CL:0000838,1.72e-15,52;CL:0000542,2.00e-15,53;CL:0000051,2.00e-15,53;CL:0002009,3.01e-15,61;CL:0000839,6.44e-15,66;CL:0000791,1.69e-13,18;CL:0000789,1.69e-13,18;CL:0002420,1.69e-13,18;CL:0002419,1.69e-13,18;CL:0000790,1.69e-13,18;CL:0000557,2.13e-13,67;CL:0000084,2.33e-10,25;CL:0000827,2.33e-10,25;CL:0000625,4.09e-09,11;CL:0000763,1.34e-07,108;CL:0000049,1.34e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-16;42!CL:0000790;1.54e-13;18!CL:0000051;3.33e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.56e-16!102;UBERON:0003061!1.56e-16!102;UBERON:0002193!3.71e-16!112;UBERON:0007023!4.56e-14!115;UBERON:0002371!3.09e-11!80;UBERON:0002405!1.99e-10!115;UBERON:0001474!3.62e-09!86;UBERON:0004765!4.37e-07!101;UBERON:0001434!4.37e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.86e-19,98;UBERON:0003061,2.86e-19,98;UBERON:0002193,3.20e-18,108;UBERON:0002405,1.65e-14,93;UBERON:0007023,4.70e-14,114;UBERON:0002371,2.63e-13,76;UBERON:0001474,1.19e-10,82;UBERON:0004765,6.76e-10,90;UBERON:0001434,1.41e-08,100 | |||
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| ||
|short_description=p2@RARRES3 | |||
}} | }} |
Latest revision as of 23:08, 18 September 2015
Short description: | p2@RARRES3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RARRES3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000255688, ENST00000439013, ENST00000537871, NM_004585, uc001nxf.3_5end |
EntrezGene: | RARRES3 |
HGNC: | 9869 |
UniProt: | Q9UL19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.86e-19 | 98 |
blood island | 2.86e-19 | 98 |
hemolymphoid system | 3.20e-18 | 108 |
immune system | 1.65e-14 | 93 |
adult organism | 4.70e-14 | 114 |
bone marrow | 2.63e-13 | 76 |
bone element | 1.19e-10 | 82 |
skeletal element | 6.76e-10 | 90 |
skeletal system | 1.41e-08 | 100 |