FFCP PHASE1:Hg19::chr1:43735646..43735660,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128218 | |EntrezGene=128218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28275 | |HGNC=28275 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AQ2 | |UniProt=Q96AQ2 | ||
|association_with_transcript=-4bp_to_ENST00000439858,NM_144626_5end | |association_with_transcript=-4bp_to_ENST00000439858,NM_144626_5end | ||
|cluster_id=chr1:43735646..43735660,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_2_at_TMEM125_5end | |description=CAGE_peak_2_at_TMEM125_5end | ||
|id=chr1:43735646..43735660,+ | |id=chr1:43735646..43735660,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.20e-07!43;CL:0000223!2.84e-07!59 | |ontology_enrichment_celltype=CL:0002076!1.20e-07!43;CL:0000223!2.84e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.27e-10;1!CL:0000164;1.27e-10;1!CL:0000502;1.27e-10;1!CL:0000172;1.27e-10;1!CL:0000173;1.27e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.97e-11,1;CL:0000164,9.97e-11,1;CL:0000502,9.97e-11,1;CL:0000172,9.97e-11,1;CL:0000173,9.97e-11,1;CL:0002351,9.97e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.51e-15;29!UBERON:0001041;2.70e-11;30!UBERON:0008801;6.76e-11;1!CL:0002351;1.27e-10;1!UBERON:0001045;1.27e-10;1!UBERON:0005425;1.27e-10;1!UBERON:0006595;2.44e-08;86 | |||
|ontology_enrichment_disease=DOID:299!9.63e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.27e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.77e-17!169;UBERON:0000925!1.77e-17!169;UBERON:0006595!1.77e-17!169;UBERON:0001007!6.67e-16!155;UBERON:0001555!6.67e-16!155;UBERON:0007026!6.67e-16!155;UBERON:0004921!1.14e-13!129;UBERON:0004185!1.14e-13!129;UBERON:0005911!8.95e-13!82;UBERON:0001004!4.44e-12!72;UBERON:0002046!1.86e-11!5;UBERON:0004117!1.86e-11!5;UBERON:0007689!1.86e-11!5;UBERON:0007123!1.86e-11!5;UBERON:0003091!1.86e-11!5;UBERON:0000065!2.62e-10!53;UBERON:0000077!2.98e-10!130;UBERON:0005153!7.27e-10!37;UBERON:0002048!8.37e-10!22;UBERON:0000117!8.37e-10!22;UBERON:0000171!8.37e-10!22;UBERON:0000170!8.37e-10!22;UBERON:0005597!8.37e-10!22;UBERON:0000118!8.37e-10!22;UBERON:0005178!3.40e-09!34;UBERON:0002224!3.40e-09!34;UBERON:0005181!7.11e-09!35;UBERON:0007023!1.12e-08!115;UBERON:0001829!1.39e-08!2;UBERON:0003127!1.44e-08!2;UBERON:0000464!2.90e-08!104;UBERON:0008947!5.13e-08!38;UBERON:0003258!5.13e-08!38;UBERON:0001041!7.11e-08!98;UBERON:0000466!8.22e-08!126;UBERON:0000160!6.46e-07!27;UBERON:0003929!6.47e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.70e-19;2!UBERON:0002171;2.53e-11;1!UBERON:0006518;2.53e-11;1!UBERON:0008949;2.53e-11;1!UBERON:0000101;2.53e-11;1!UBERON:0002167;2.53e-11;1!UBERON:0002048;5.32e-11;22!UBERON:0000117;5.32e-11;22!UBERON:0000171;5.32e-11;22!UBERON:0000170;5.32e-11;22!UBERON:0001831;6.76e-11;1!UBERON:0001567;6.76e-11;1!UBERON:0001154;1.27e-10;1!UBERON:0000941;1.27e-10;1!UBERON:0001153;1.27e-10;1!UBERON:0001785;1.27e-10;1!UBERON:0002464;1.27e-10;1!UBERON:0004904;1.27e-10;1!UBERON:0009854;1.27e-10;1!UBERON:0001021;1.27e-10;1!UBERON:0009856;2.54e-10;4!UBERON:0005178;4.69e-10;34!UBERON:0002224;4.69e-10;34!UBERON:0005181;2.53e-09;35!UBERON:0001044;3.41e-07;6!UBERON:0003293;3.41e-07;6!UBERON:0003294;3.41e-07;6!UBERON:0010047;3.41e-07;6!UBERON:0003408;3.41e-07;6!UBERON:0000167;3.41e-07;6!UBERON:0000065;6.01e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.70e-19,2;UBERON:0005178,3.79e-13,34;UBERON:0002224,3.79e-13,34;UBERON:0005181,9.43e-13,35;UBERON:0008947,1.09e-11,38;UBERON:0003258,1.09e-11,38;UBERON:0004921,1.99e-11,118;UBERON:0002171,2.53e-11,1;UBERON:0006518,2.53e-11,1;UBERON:0008949,2.53e-11,1;UBERON:0000101,2.53e-11,1;UBERON:0002167,2.53e-11,1;UBERON:0002048,5.49e-11,22;UBERON:0000117,5.49e-11,22;UBERON:0000171,5.49e-11,22;UBERON:0000170,5.49e-11,22;UBERON:0005597,5.49e-11,22;UBERON:0000118,5.49e-11,22;UBERON:0001831,7.46e-11,1;UBERON:0001567,7.46e-11,1;UBERON:0008801,7.46e-11,1;UBERON:0000941,1.21e-10,1;UBERON:0001785,1.21e-10,1;UBERON:0002464,1.21e-10,1;UBERON:0004904,1.21e-10,1;UBERON:0001021,1.21e-10,1;UBERON:0003902,1.21e-10,1;UBERON:0005425,1.21e-10,1;UBERON:0001154,1.33e-10,1;UBERON:0001153,1.33e-10,1;UBERON:0001045,1.33e-10,1;UBERON:0001007,1.56e-10,145;UBERON:0001555,1.56e-10,145;UBERON:0007026,1.56e-10,145;UBERON:0001041,1.53e-09,87;UBERON:0004119,2.45e-09,160;UBERON:0000925,2.45e-09,160;UBERON:0006595,2.45e-09,160;UBERON:0001004,3.08e-09,74;UBERON:0005153,5.72e-09,37;UBERON:0000915,2.40e-08,52;UBERON:0000065,5.21e-08,54;UBERON:0001044,3.15e-07,6;UBERON:0003293,3.15e-07,6;UBERON:0003294,3.15e-07,6;UBERON:0010047,3.15e-07,6;UBERON:0000167,3.15e-07,6;UBERON:0005157,5.83e-07,47;UBERON:0007023,7.47e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,6.28021051175185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79679015322043,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,3.98104772431402,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,17.2995608359665,8.96064539068096,31.0679291510397,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0,0,0,0,0,3.83780436800028,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0.222462803784138,1.0989032999072,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28369952483357,0,0,0,0,1.64973582971138,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.112131862580613,5.79189140331301,0.202117188958219,0,0,0.0673520530145875,1.64961072403156,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,6.28021051175185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94596855909067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.79679015322043,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,3.98104772431402,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82479747637269,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,17.2995608359665,8.96064539068096,31.0679291510397,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0.163771917510097,0.147856086217045,0,0,0,0,0,3.83780436800028,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0.222462803784138,1.0989032999072,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28369952483357,0,0,0,0,1.64973582971138,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.112131862580613,5.79189140331301,0.202117188958219,0,0,0.0673520530145875,1.64961072403156,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@TMEM125 | |short_description=p2@TMEM125 | ||
}} | }} |
Latest revision as of 04:12, 18 September 2015
Short description: | p2@TMEM125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM125_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -4bp_to_ENST00000439858, NM_144626_5end |
EntrezGene: | TMEM125 |
HGNC: | 28275 |
UniProt: | Q96AQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.97e-11 | 1 |
enteroendocrine cell | 9.97e-11 | 1 |
type D enteroendocrine cell | 9.97e-11 | 1 |
somatostatin secreting cell | 9.97e-11 | 1 |
pancreatic D cell | 9.97e-11 | 1 |
progenitor cell of endocrine pancreas | 9.97e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.97e-11 | 1 |