FFCP PHASE1:Hg19::chr11:66083196..66083252,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:66083196..66083252,-
|short_description=p2@CD248
|description=CAGE_peak_2_at_CD248_5end
|association_with_transcript=384bp_to_AK027290_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57124 | |EntrezGene=57124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18219 | |HGNC=18219 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCU0 | |UniProt=Q9HCU0 | ||
|association_with_transcript=384bp_to_AK027290_5end | |||
|cluster_id=chr11:66083196..66083252,- | |||
|coexpression_cluster_id=C563 | |||
|description=CAGE_peak_2_at_CD248_5end | |||
|id=chr11:66083196..66083252,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-31!180;CL:0000057!1.57e-27!75;CL:0000183!8.19e-15!59;CL:0000187!1.04e-14!54;CL:0000680!5.75e-14!57;CL:0000056!5.75e-14!57;CL:0000355!5.75e-14!57;CL:0000393!3.40e-13!60;CL:0000211!3.40e-13!60;CL:0002620!2.91e-12!23;CL:0000192!2.02e-11!42;CL:0000514!2.02e-11!42;CL:0000048!1.98e-09!430;CL:0000723!4.59e-09!436;CL:0002334!6.25e-09!12;CL:0000034!2.15e-08!444;CL:0000359!2.43e-07!32;CL:0000136!5.22e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.70e-13;23!CL:0000057;7.40e-11;73!CL:0002334;1.52e-10;12!CL:0000134;3.64e-10;55!CL:0000723;1.54e-09;61!CL:0002320;5.11e-09;188!CL:0000048;6.73e-09;58!CL:0002570;9.92e-08;8!CL:0000034;2.87e-07;69!CL:0000187;7.89e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-30,76;CL:0000048,5.91e-15,427;CL:0000723,4.16e-14,433;CL:0002620,3.45e-13,23;CL:0000034,5.01e-13,441;CL:0000187,1.83e-11,55;CL:0000680,4.09e-11,58;CL:0000056,4.09e-11,58;CL:0000355,4.09e-11,58;CL:0002334,8.00e-11,12;CL:0002320,9.07e-10,361;CL:0000393,3.08e-09,61;CL:0000211,3.08e-09,61;CL:0000192,3.13e-09,43;CL:0000514,3.13e-09,43;CL:0000136,6.60e-08,15;CL:0002570,6.89e-08,8;CL:0000134,8.26e-08,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.49e-20!83;UBERON:0002329!3.49e-20!83;UBERON:0003077!3.49e-20!83;UBERON:0003059!3.49e-20!83;UBERON:0007282!3.49e-20!83;UBERON:0009618!3.49e-20!83;UBERON:0007285!3.49e-20!83;UBERON:0004290!3.68e-18!70;UBERON:0000486!8.95e-15!82;UBERON:0002385!9.63e-15!63;UBERON:0001015!9.63e-15!63;UBERON:0000383!9.63e-15!63;UBERON:0001134!2.58e-14!61;UBERON:0002036!2.58e-14!61;UBERON:0003082!2.58e-14!61;UBERON:0002199!9.17e-14!45;UBERON:0002416!9.17e-14!45;UBERON:0003102!1.22e-13!95;UBERON:0005256!1.93e-12!143;UBERON:0000475!2.52e-11!365;UBERON:0004923!2.82e-11!57;UBERON:0002097!1.64e-10!40;UBERON:0001013!3.34e-10!14;UBERON:0002100!5.34e-08!216;UBERON:0000468!6.24e-08!659;UBERON:0004872!1.04e-07!84;UBERON:0000479!4.08e-07!787;UBERON:0005631!5.89e-07!14;UBERON:0000158!5.89e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.28e-12;14!UBERON:0002199;8.39e-11;46!UBERON:0002416;8.39e-11;46!UBERON:0002384;6.87e-10;198!UBERON:0002097;8.68e-10;41!UBERON:0003102;4.30e-09;50!UBERON:0004457;4.11e-07;9!UBERON:0000042;4.11e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,9.99e-17,46;UBERON:0002416,9.99e-17,46;UBERON:0007524,1.76e-14,73;UBERON:0002329,2.56e-14,71;UBERON:0003059,2.56e-14,71;UBERON:0007282,2.56e-14,71;UBERON:0004290,2.56e-14,71;UBERON:0009618,2.56e-14,71;UBERON:0003102,4.82e-14,99;UBERON:0003077,6.56e-14,72;UBERON:0007285,6.56e-14,72;UBERON:0002097,1.12e-12,41;UBERON:0001013,2.02e-12,14;UBERON:0000486,5.92e-12,83;UBERON:0007503,1.05e-11,78;UBERON:0001134,2.67e-11,62;UBERON:0002036,2.67e-11,62;UBERON:0003082,2.67e-11,62;UBERON:0002385,3.01e-11,64;UBERON:0001015,3.01e-11,64;UBERON:0000383,3.01e-11,64;UBERON:0002384,1.85e-10,371;UBERON:0004923,3.74e-10,66;UBERON:0005256,7.32e-10,122;UBERON:0003104,2.62e-09,160;UBERON:0009142,2.62e-09,160;UBERON:0000926,1.99e-07,315;UBERON:0004120,1.99e-07,315;UBERON:0006603,1.99e-07,315;UBERON:0000479,4.39e-07,773 | |||
|phase1_expression=6.17706489519893,24.1933591996811,10.5715803071978,5.00366491765652,9.38618298297304,2.61701557230111,25.3299878168311,15.1612769622439,32.1258322685801,0,0,5.24259293112413,6.59417445571134,5.44571953024205,2.31978163009541,6.05092631806598,1.80808358407193,1.46062018077475,3.90346239032406,0.369363174230364,1.22400414746552,0,0,0.136874425072884,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579297615531196,4.87613732627923,0.670700859703636,0.767175371061182,6.86734389530676,2.00535164254356,3.18662341713812,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,13.9152146474689,2.15271869829786,3.70745706277013,26.9626423503885,9.22137793715728,3.36406560085384,0,0.74000264525148,3.11211035399766,0.808264032418128,0.653847612453835,6.81108424402191,5.18558332031999,1.64025002283658,9.05264222807929,0.570471821544449,7.62188270814185,1.52664848236894,1.45685649931318,0.98315564691574,3.26646674007829,3.80786383666481,14.1556320210799,7.12801714369232,11.1270118175351,9.10161361938026,3.59309070908119,0.673344455816265,4.37914819551875,3.60183350129438,3.07284334616587,7.04921930337745,4.95785594391769,0.567160915800105,24.0382111823075,6.83383644219416,5.72216133130817,21.606558918077,8.65641245602887,13.6549486224183,9.86419338557426,10.6329089311998,8.96420447483027,14.3887251319145,4.41839513483037,10.8302858068604,35.8559688441781,9.06768884048762,7.79978724628243,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,14.0804579096834,24.4431556513296,19.3388889893473,13.9310378409594,23.1001434134267,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.4694440679884,10.2906097969879,0,0,0,0,0,2.23038153388083,0,0,0,0.0925884451585296,0,2.07986957055916,0,0.231860809950154,0.821860859650752,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,5.13217338068116,0.411309970813294,0,0,3.36393253036082,3.92364061949952,5.20701829328745,0.904902010304444,32.1890801266694,2.535908257668,9.0418959638856,9.36066932202295,2.82928111688356,1.41849132023278,3.46348832720929,6.57698770827479,24.4179722426149,4.11620168390384,1.95441710576241,4.26470338491055,0,0.301439377059586,0,1.29964888536674,0,0,0,1.19812427745791,1.14861935834114,0,4.05387658669222,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,5.64380861908043,9.50323990013386,1.35632511849868,6.23912584592421,24.0879134876168,6.78120384645919,4.56851518471581,5.11608369537122,0,6.2083842775503,7.3064815838898,0.921845842708516,11.1211026519146,14.4892856522428,9.26487244289311,0,0.215714200818617,0,5.45629628603267,8.32177197552485,21.772101119737,8.68377327365719,1.99500565274481,10.6650835884568,13.1983323733372,7.67560873600055,7.88184213603677,2.96836132889982,12.4909851980151,16.5132404541208,6.98080826117378,19.7316683089776,9.87788216909654,0,0,0,1.14814448164607,5.28064387219479,5.11385218341754,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0.976135183992909,1.03041011647722,0,0,1.14853107599234,1.30012049207304,6.42735719376638,3.57681657680851,3.38906957652218,4.1445992176055,0.413509717453592,5.90811346775505,9.28106841051063,2.81247870473133,6.23224249527162,0,0,0,0,1.85938219718914,34.3145458045398,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0.9266210955196,0,1.48863347743867,3.16379424718726,2.47819252100972,4.09436466098134,12.4102306529837,5.09125196681499,1.56989728039846,1.79872457583315,4.94166653524899,2.12062324222236,0,0,1.26377536871694,1.46290121726877,0.731140468893853,5.28250733783777,5.05049672209547,10.1811911006673,2.26016233240486,2.75682671773062,0.66343897524122,0.876901770507525,9.83918408253369,7.21484227251296,0.405820753925408,2.478587984798,1.12678241012897,1.43411352204052,2.94747123039363,1.07001315444375,2.83808851256478,18.3663642708968,22.3920527212733,1.13841952129715,7.34862912514464,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03239260505091,0,0,0,0.47748896947538,0.296964680832639,1.22864280839693,0,0,0,0,0,1.19548792950642,0.276283915531148,0,0,0,4.3545542272653,0,0,0,2.36744173528641,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,2.00070672109872,0,0,0,0,2.23300811812344,3.02272058226146,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.134802265961354,2.40773294189637,0,0,0,0,0.394584402849391,3.62972148145992,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,3.84398670132466,0,0,0,0,1.16386819786103,0,2.03382666702479,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,1.11712960508902,1.60412296808179,0.717873024576814,0.5990370014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| ||
|short_description=p2@CD248 | |||
}} | }} |
Latest revision as of 13:57, 19 September 2015
Short description: | p2@CD248 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD248_5end |
Coexpression cluster: | C563_Mesenchymal_Fibroblast_Adipocyte_tenocyte_Placental_Hair_Synoviocyte |
Association with transcript: | 384bp_to_AK027290_5end |
EntrezGene: | CD248 |
HGNC: | 18219 |
UniProt: | Q9HCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-30 | 76 |
multi fate stem cell | 5.91e-15 | 427 |
somatic stem cell | 4.16e-14 | 433 |
skin fibroblast | 3.45e-13 | 23 |
stem cell | 5.01e-13 | 441 |
muscle cell | 1.83e-11 | 55 |
muscle precursor cell | 4.09e-11 | 58 |
myoblast | 4.09e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.09e-11 | 58 |
preadipocyte | 8.00e-11 | 12 |
connective tissue cell | 9.07e-10 | 361 |
electrically responsive cell | 3.08e-09 | 61 |
electrically active cell | 3.08e-09 | 61 |
smooth muscle cell | 3.13e-09 | 43 |
smooth muscle myoblast | 3.13e-09 | 43 |
fat cell | 6.60e-08 | 15 |
mesenchymal stem cell of adipose | 6.89e-08 | 8 |
mesenchymal cell | 8.26e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
integument | 9.99e-17 | 46 |
integumental system | 9.99e-17 | 46 |
dense mesenchyme tissue | 1.76e-14 | 73 |
somite | 2.56e-14 | 71 |
presomitic mesoderm | 2.56e-14 | 71 |
presumptive segmental plate | 2.56e-14 | 71 |
dermomyotome | 2.56e-14 | 71 |
trunk paraxial mesoderm | 2.56e-14 | 71 |
surface structure | 4.82e-14 | 99 |
paraxial mesoderm | 6.56e-14 | 72 |
presumptive paraxial mesoderm | 6.56e-14 | 72 |
skin of body | 1.12e-12 | 41 |
adipose tissue | 2.02e-12 | 14 |
multilaminar epithelium | 5.92e-12 | 83 |
epithelial vesicle | 1.05e-11 | 78 |
skeletal muscle tissue | 2.67e-11 | 62 |
striated muscle tissue | 2.67e-11 | 62 |
myotome | 2.67e-11 | 62 |
muscle tissue | 3.01e-11 | 64 |
musculature | 3.01e-11 | 64 |
musculature of body | 3.01e-11 | 64 |
connective tissue | 1.85e-10 | 371 |
organ component layer | 3.74e-10 | 66 |
trunk mesenchyme | 7.32e-10 | 122 |
mesenchyme | 2.62e-09 | 160 |
entire embryonic mesenchyme | 2.62e-09 | 160 |
mesoderm | 1.99e-07 | 315 |
mesoderm-derived structure | 1.99e-07 | 315 |
presumptive mesoderm | 1.99e-07 | 315 |
tissue | 4.39e-07 | 773 |