FFCP PHASE1:Hg19::chr16:84600432..84600461,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84600432..84600461,- | |||
|coexpression_cluster_id=C842 | |||
|description=CAGE_peak_at_chr16:84600432..84600461,- | |description=CAGE_peak_at_chr16:84600432..84600461,- | ||
|id=chr16:84600432..84600461,- | |id=chr16:84600432..84600461,- | ||
|ontology_enrichment_celltype=CL:0000003!3.12e-26!722;CL:0000144!2.72e-25!625;CL:0002371!8.97e-25!591;CL:0002057!2.19e-24!42;CL:0000548!2.17e-23!679;CL:0000004!2.17e-23!679;CL:0000255!2.17e-23!679;CL:0000860!5.69e-23!45;CL:0000012!2.60e-22!682;CL:0000048!4.09e-21!430;CL:0000766!7.24e-21!76;CL:0000723!1.06e-20!436;CL:0000034!1.00e-19!444;CL:0002194!6.08e-19!63;CL:0000576!6.08e-19!63;CL:0000040!6.08e-19!63;CL:0000559!6.08e-19!63;CL:0002009!1.18e-17!65;CL:0000839!1.30e-15!70;CL:0000557!3.53e-15!71;CL:0002320!4.21e-15!365;CL:0000063!1.13e-14!578;CL:0000134!2.90e-14!358;CL:0000738!1.01e-12!140;CL:0002087!9.74e-12!119;CL:0000763!3.92e-11!112;CL:0000049!3.92e-11!112;CL:0000219!5.42e-11!390;CL:0000222!1.34e-09!119;CL:0002031!2.49e-09!124;CL:0002032!4.33e-08!165;CL:0000837!4.33e-08!165;CL:0000037!2.34e-07!172;CL:0000566!2.34e-07!172 | |ontology_enrichment_celltype=CL:0000003!3.12e-26!722;CL:0000144!2.72e-25!625;CL:0002371!8.97e-25!591;CL:0002057!2.19e-24!42;CL:0000548!2.17e-23!679;CL:0000004!2.17e-23!679;CL:0000255!2.17e-23!679;CL:0000860!5.69e-23!45;CL:0000012!2.60e-22!682;CL:0000048!4.09e-21!430;CL:0000766!7.24e-21!76;CL:0000723!1.06e-20!436;CL:0000034!1.00e-19!444;CL:0002194!6.08e-19!63;CL:0000576!6.08e-19!63;CL:0000040!6.08e-19!63;CL:0000559!6.08e-19!63;CL:0002009!1.18e-17!65;CL:0000839!1.30e-15!70;CL:0000557!3.53e-15!71;CL:0002320!4.21e-15!365;CL:0000063!1.13e-14!578;CL:0000134!2.90e-14!358;CL:0000738!1.01e-12!140;CL:0002087!9.74e-12!119;CL:0000763!3.92e-11!112;CL:0000049!3.92e-11!112;CL:0000219!5.42e-11!390;CL:0000222!1.34e-09!119;CL:0002031!2.49e-09!124;CL:0002032!4.33e-08!165;CL:0000837!4.33e-08!165;CL:0000037!2.34e-07!172;CL:0000566!2.34e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-19;33!CL:0002057;1.32e-19;33!CL:0000473;9.22e-16;39!CL:0000234;9.22e-16;39!CL:0000576;2.33e-15;48!CL:0000766;5.32e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.33e-26,42;CL:0002057,9.33e-26,42;CL:0000473,3.34e-25,48;CL:0000234,3.34e-25,48;CL:0000766,1.31e-23,72;CL:0000048,1.26e-21,427;CL:0002194,1.89e-21,59;CL:0000576,1.89e-21,59;CL:0000040,1.89e-21,59;CL:0000559,1.89e-21,59;CL:0000723,2.59e-21,433;CL:0000034,2.80e-20,441;CL:0002009,1.03e-19,61;CL:0000839,5.29e-18,66;CL:0000557,2.83e-17,67;CL:0002320,1.04e-15,361;CL:0000134,7.91e-15,354;CL:0000738,1.72e-13,136;CL:0000763,7.98e-13,108;CL:0000049,7.98e-13,108;CL:0002087,4.81e-12,115;CL:0000219,2.89e-11,386;CL:0000222,6.78e-10,121;CL:0002031,1.06e-09,120;CL:0002032,1.36e-08,161;CL:0000837,1.36e-08,161;CL:0000037,4.47e-08,168;CL:0000988,2.73e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.74e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.66e-16!167;UBERON:0003081!5.73e-15!216;UBERON:0002193!9.75e-15!112;UBERON:0002371!3.71e-14!80;UBERON:0002390!5.68e-14!102;UBERON:0003061!5.68e-14!102;UBERON:0002384!8.32e-13!375;UBERON:0004765!1.47e-12!101;UBERON:0001434!1.47e-12!101;UBERON:0001474!3.62e-12!86;UBERON:0002405!1.43e-09!115;UBERON:0000926!5.53e-07!448;UBERON:0004120!5.53e-07!448;UBERON:0006603!5.53e-07!448 | |ontology_enrichment_uberon=UBERON:0002204!3.66e-16!167;UBERON:0003081!5.73e-15!216;UBERON:0002193!9.75e-15!112;UBERON:0002371!3.71e-14!80;UBERON:0002390!5.68e-14!102;UBERON:0003061!5.68e-14!102;UBERON:0002384!8.32e-13!375;UBERON:0004765!1.47e-12!101;UBERON:0001434!1.47e-12!101;UBERON:0001474!3.62e-12!86;UBERON:0002405!1.43e-09!115;UBERON:0000926!5.53e-07!448;UBERON:0004120!5.53e-07!448;UBERON:0006603!5.53e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.51e-17,167;UBERON:0002371,2.23e-16,76;UBERON:0002193,3.80e-16,108;UBERON:0002390,1.37e-15,98;UBERON:0003061,1.37e-15,98;UBERON:0003081,2.31e-15,203;UBERON:0004765,9.61e-15,90;UBERON:0002405,1.50e-14,93;UBERON:0001434,3.94e-14,100;UBERON:0000926,6.78e-14,315;UBERON:0004120,6.78e-14,315;UBERON:0006603,6.78e-14,315;UBERON:0001474,1.24e-13,82;UBERON:0002384,1.71e-13,371 | |||
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| ||
|short_description=p@chr16:84600432..84600461,- | |short_description=p@chr16:84600432..84600461,- | ||
}} | }} |
Latest revision as of 12:54, 25 July 2015
Short description: | p@chr16:84600432..84600461, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84600432..84600461, - |
Coexpression cluster: | C842_Neutrophils_CD14CD16_CD14_Eosinophils_migratory_Mesenchymal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.33e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.33e-26 | 42 |
defensive cell | 3.34e-25 | 48 |
phagocyte | 3.34e-25 | 48 |
myeloid leukocyte | 1.31e-23 | 72 |
multi fate stem cell | 1.26e-21 | 427 |
monopoietic cell | 1.89e-21 | 59 |
monocyte | 1.89e-21 | 59 |
monoblast | 1.89e-21 | 59 |
promonocyte | 1.89e-21 | 59 |
somatic stem cell | 2.59e-21 | 433 |
stem cell | 2.80e-20 | 441 |
macrophage dendritic cell progenitor | 1.03e-19 | 61 |
myeloid lineage restricted progenitor cell | 5.29e-18 | 66 |
granulocyte monocyte progenitor cell | 2.83e-17 | 67 |
connective tissue cell | 1.04e-15 | 361 |
mesenchymal cell | 7.91e-15 | 354 |
leukocyte | 1.72e-13 | 136 |
myeloid cell | 7.98e-13 | 108 |
common myeloid progenitor | 7.98e-13 | 108 |
nongranular leukocyte | 4.81e-12 | 115 |
motile cell | 2.89e-11 | 386 |
mesodermal cell | 6.78e-10 | 121 |
hematopoietic lineage restricted progenitor cell | 1.06e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.36e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-08 | 161 |
hematopoietic stem cell | 4.47e-08 | 168 |
hematopoietic cell | 2.73e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.51e-17 | 167 |
bone marrow | 2.23e-16 | 76 |
hemolymphoid system | 3.80e-16 | 108 |
hematopoietic system | 1.37e-15 | 98 |
blood island | 1.37e-15 | 98 |
lateral plate mesoderm | 2.31e-15 | 203 |
skeletal element | 9.61e-15 | 90 |
immune system | 1.50e-14 | 93 |
skeletal system | 3.94e-14 | 100 |
mesoderm | 6.78e-14 | 315 |
mesoderm-derived structure | 6.78e-14 | 315 |
presumptive mesoderm | 6.78e-14 | 315 |
bone element | 1.24e-13 | 82 |
connective tissue | 1.71e-13 | 371 |